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The map label for this gene is uspF [C]

Identifier: 193212488

GI number: 193212488

Start: 895469

End: 895927

Strand: Direct

Name: uspF [C]

Synonym: Cpar_0825

Alternate gene names: 193212488

Gene position: 895469-895927 (Clockwise)

Preceding gene: 193212487

Following gene: 193212496

Centisome position: 39.12

GC content: 52.51

Gene sequence:

>459_bases
ATGATTACCATCAAGTCGATTCTCTGCCCGATGGATTTTTCGGAAGCTTCGAAAAATGCTTATCGGTACGCTTGTGAGTT
CGCCAAATCGATGGGTGCGAGCGTCGTGCTGCTCAATGTGATCGAGCCCCGTCCCATAGCGGCTGACATGACACTGAACT
ACATCCCGCTTGAGGAAGATCTTGCCGCTGCTGCAAAGGAAGATTTCATTCCGATGATTGATCAGTGCAAGAATGCCGGG
CTCGATATCAGCGCCGATGTGATGATTGGTGTTCCGGCAGAGGTGATTCTGCAACAAACGGACGATCTTGACGTGAGTCT
GGTGATCATGGGTTCTCACGGCAAAACAGGGCTGAGCCGTCTTCTGATGGGGAGCGTTGCCGAAGCGGTGGTGCGCAAAG
CGCAGGTGCCGGTGCTGATTGTGAAGGCGAACGAAAAAGAGTTTATCAGCGAAGGGTAG

Upstream 100 bases:

>100_bases
ACGATTTTCCCGGTTCCGGTCGATCTGTTCAGGACCTTTTTCGAGAAAAAAGCCTGACCCGGTTTTTCAGGAATATTTCA
AATGATCAAACAATACGGCC

Downstream 100 bases:

>100_bases
AGGGGGAAGAATTATGAATTGAATTTGTGTGGGCGGCTCTTTTGGCCGCCCTCGGTTTTTTTGTGCCGTTTTACGATCGG
CCTAATCCGTCTGATTCGAC

Product: UspA domain-containing protein

Products: NA

Alternate protein names: USP MJ0577 [H]

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MITIKSILCPMDFSEASKNAYRYACEFAKSMGASVVLLNVIEPRPIAADMTLNYIPLEEDLAAAAKEDFIPMIDQCKNAG
LDISADVMIGVPAEVILQQTDDLDVSLVIMGSHGKTGLSRLLMGSVAEAVVRKAQVPVLIVKANEKEFISEG

Sequences:

>Translated_152_residues
MITIKSILCPMDFSEASKNAYRYACEFAKSMGASVVLLNVIEPRPIAADMTLNYIPLEEDLAAAAKEDFIPMIDQCKNAG
LDISADVMIGVPAEVILQQTDDLDVSLVIMGSHGKTGLSRLLMGSVAEAVVRKAQVPVLIVKANEKEFISEG
>Mature_152_residues
MITIKSILCPMDFSEASKNAYRYACEFAKSMGASVVLLNVIEPRPIAADMTLNYIPLEEDLAAAAKEDFIPMIDQCKNAG
LDISADVMIGVPAEVILQQTDDLDVSLVIMGSHGKTGLSRLLMGSVAEAVVRKAQVPVLIVKANEKEFISEG

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 16359; Mature: 16359

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITIKSILCPMDFSEASKNAYRYACEFAKSMGASVVLLNVIEPRPIAADMTLNYIPLEED
CEEHHHECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEECCEEEEECCHHH
LAAAAKEDFIPMIDQCKNAGLDISADVMIGVPAEVILQQTDDLDVSLVIMGSHGKTGLSR
HHHHHHHCCCHHHHHHCCCCCCEECCEEECCCHHHHEECCCCCCEEEEEECCCCCHHHHH
LLMGSVAEAVVRKAQVPVLIVKANEKEFISEG
HHHHHHHHHHHHHCCCCEEEEECCCHHHCCCC
>Mature Secondary Structure
MITIKSILCPMDFSEASKNAYRYACEFAKSMGASVVLLNVIEPRPIAADMTLNYIPLEED
CEEHHHECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEECCEEEEECCHHH
LAAAAKEDFIPMIDQCKNAGLDISADVMIGVPAEVILQQTDDLDVSLVIMGSHGKTGLSR
HHHHHHHCCCHHHHHHCCCCCCEECCEEECCCHHHHEECCCCCCEEEEEECCCCCHHHHH
LLMGSVAEAVVRKAQVPVLIVKANEKEFISEG
HHHHHHHHHHHHHCCCCEEEEECCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9860944 [H]