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The map label for this gene is yqhM [H]

Identifier: 193212477

GI number: 193212477

Start: 886085

End: 886825

Strand: Direct

Name: yqhM [H]

Synonym: Cpar_0814

Alternate gene names: 193212477

Gene position: 886085-886825 (Clockwise)

Preceding gene: 193212476

Following gene: 193212478

Centisome position: 38.71

GC content: 58.97

Gene sequence:

>741_bases
ATGGAACTCGATCTATGGCTCATGCAGGCGATGGCCGATGATTCGTTCCAGCGGTTGTTCGGCGCGAACGGTTGCCTCTG
GCGATTTTATTCGTGGTCACCTTCGGCCATTTCGCTCGGCAAAAACCAGAATCCGGAAGAGATCGACCGGGAGCGGTGCC
GCGCCGATGGCGTCGATGTCGTCGTCCGTCCCACCGGTGGGCGAGCGGTGTTTCATGCCGATGAACTGACCTATTCGTTT
TTCGCGGCGACTGAGCTGCCGAACGAAACCATCTACCGCATGGTGCACGAAACGCTGCAACAGGCGCTGGCTGGCGTTGG
CGTCGAGGCGGAGTTCTGCCGGACGCAGCCCGACTTCCGGGCCCGGTACGCTTCGGCGGATTCAGTTTCCTGTTTCACAG
CGTCAGCCCGCTACGAATTGCAGGTCGATGGACGCAAGCTGGTCGGTTCGGCGCAACGCCGTCACGGTAATGTTATCCTT
CAGCACGGTTCGCTACCTCTTTCTTCACGCCATCGTCAGATTTCTCGTTATCTTGCAGGTGCGTCCCGCGAGCTTGTCGA
AGCGGTCGATGCCGGTATGGCAGAGAAGACCGCGTCGCTCGATGAGTTTACCGATGCCGGTTATGCCGAGCTGGTGCCCC
TGATCGTCTCAGCCGCCGGAACGTCCGCTGAAGAGGGGGCAAGGGTTCTGAGTCAGGATGACCTTGAACGTTTCGGCGTG
TCTCAAGTTTCAATCACTTAA

Upstream 100 bases:

>100_bases
AATTTCAGGCAGGACGACCTTGTTTCGATATCTGAACATGCCACCTCTTTTTTCATCCGTTTGCTGCATTGATACCGGAG
CCGGTTCCGGCCGGTTCAAC

Downstream 100 bases:

>100_bases
TGTTTTTCCATCATGCCCAACGGTTCCGCCAACAAACTGCCTCACGTTACGACCCGCAGGATGCTCGATATGAAAGAGCG
CGGCGAAAAGATTGCCGTTC

Product: biotin/lipoate A/B protein ligase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MELDLWLMQAMADDSFQRLFGANGCLWRFYSWSPSAISLGKNQNPEEIDRERCRADGVDVVVRPTGGRAVFHADELTYSF
FAATELPNETIYRMVHETLQQALAGVGVEAEFCRTQPDFRARYASADSVSCFTASARYELQVDGRKLVGSAQRRHGNVIL
QHGSLPLSSRHRQISRYLAGASRELVEAVDAGMAEKTASLDEFTDAGYAELVPLIVSAAGTSAEEGARVLSQDDLERFGV
SQVSIT

Sequences:

>Translated_246_residues
MELDLWLMQAMADDSFQRLFGANGCLWRFYSWSPSAISLGKNQNPEEIDRERCRADGVDVVVRPTGGRAVFHADELTYSF
FAATELPNETIYRMVHETLQQALAGVGVEAEFCRTQPDFRARYASADSVSCFTASARYELQVDGRKLVGSAQRRHGNVIL
QHGSLPLSSRHRQISRYLAGASRELVEAVDAGMAEKTASLDEFTDAGYAELVPLIVSAAGTSAEEGARVLSQDDLERFGV
SQVSIT
>Mature_246_residues
MELDLWLMQAMADDSFQRLFGANGCLWRFYSWSPSAISLGKNQNPEEIDRERCRADGVDVVVRPTGGRAVFHADELTYSF
FAATELPNETIYRMVHETLQQALAGVGVEAEFCRTQPDFRARYASADSVSCFTASARYELQVDGRKLVGSAQRRHGNVIL
QHGSLPLSSRHRQISRYLAGASRELVEAVDAGMAEKTASLDEFTDAGYAELVPLIVSAAGTSAEEGARVLSQDDLERFGV
SQVSIT

Specific function: Unknown

COG id: COG0095

COG function: function code H; Lipoate-protein ligase A

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004143 [H]

Pfam domain/function: PF03099 BPL_LipA_LipB [H]

EC number: NA

Molecular weight: Translated: 27076; Mature: 27076

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELDLWLMQAMADDSFQRLFGANGCLWRFYSWSPSAISLGKNQNPEEIDRERCRADGVDV
CCHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCCCEEECCCCCCHHHHHHHHHCCCCCEE
VVRPTGGRAVFHADELTYSFFAATELPNETIYRMVHETLQQALAGVGVEAEFCRTQPDFR
EEECCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHH
ARYASADSVSCFTASARYELQVDGRKLVGSAQRRHGNVILQHGSLPLSSRHRQISRYLAG
HHHCCCCCCEEEEECCEEEEEECCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHC
ASRELVEAVDAGMAEKTASLDEFTDAGYAELVPLIVSAAGTSAEEGARVLSQDDLERFGV
CHHHHHHHHHCCHHHHHCCHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
SQVSIT
CEEECC
>Mature Secondary Structure
MELDLWLMQAMADDSFQRLFGANGCLWRFYSWSPSAISLGKNQNPEEIDRERCRADGVDV
CCHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCCCEEECCCCCCHHHHHHHHHCCCCCEE
VVRPTGGRAVFHADELTYSFFAATELPNETIYRMVHETLQQALAGVGVEAEFCRTQPDFR
EEECCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHH
ARYASADSVSCFTASARYELQVDGRKLVGSAQRRHGNVILQHGSLPLSSRHRQISRYLAG
HHHCCCCCCEEEEECCEEEEEECCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHC
ASRELVEAVDAGMAEKTASLDEFTDAGYAELVPLIVSAAGTSAEEGARVLSQDDLERFGV
CHHHHHHHHHCCHHHHHCCHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
SQVSIT
CEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]