| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193212420
Identifier: 193212420
GI number: 193212420
Start: 813962
End: 814477
Strand: Direct
Name: 193212420
Synonym: Cpar_0756
Alternate gene names: NA
Gene position: 813962-814477 (Clockwise)
Preceding gene: 193212418
Following gene: 193212421
Centisome position: 35.56
GC content: 54.65
Gene sequence:
>516_bases ATGACCGACCTTTTCCAGTACCCGATGTCCTTTCCCGGCTGGTGGCTCGATAACTACTACTACGTTACCTGGTTTCTGAG TATGCTGTTTCTGGGCGGCGGCTGGGCCCTTTTTTACCGCTACGGCAAGTTCAGTTACGGCGTTGATTTCGGATGTCTCT GGAAAACCACGCTGATGATTCTCATCACCACGATTGCTCTCGGCGTGCCGCAATATTACAACACCCGTTTCAGCGCCGAG CATGGCCGTGACGGTGATTCGGTGACGTTGACTCCGGATCGCATTGAATACGTCTCGCGCAAAGGTGAAAAGAAGATGTT CCTGTACAAGGACATCGTTTCGATTTACCAGGAGCAGATCACCTACAATCCTCCGCCGCAGGTGTTCATTGTGGCCAACA ATGCCGGTCTGCGCGATTCGATCACCGTCACCGACGGCAAGGACGGCCTGCCGGATGCTGGCAAGATGCTCTCAGAGCTG TCGAAGCGAAGCGGCGTGACCGTCAAGAGGCCGTAA
Upstream 100 bases:
>100_bases TTTGAATAATAAGAAACTTGGGCAGCTCTCAATAGCGTGATGATTCCGGTCTGCCGGGTCAATCCGTTTTCTGCGTTGCT CTTCAGACGGCTTTCCGCTC
Downstream 100 bases:
>100_bases TCCTGCTGTTTCCGGGAAACTTCCATGCAGAGTTCCAGAAGCGTTTCGACTGAGGCGTTCGTGCGGCTGGTCGTTGATAT CGGCAACACCACCACGACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MTDLFQYPMSFPGWWLDNYYYVTWFLSMLFLGGGWALFYRYGKFSYGVDFGCLWKTTLMILITTIALGVPQYYNTRFSAE HGRDGDSVTLTPDRIEYVSRKGEKKMFLYKDIVSIYQEQITYNPPPQVFIVANNAGLRDSITVTDGKDGLPDAGKMLSEL SKRSGVTVKRP
Sequences:
>Translated_171_residues MTDLFQYPMSFPGWWLDNYYYVTWFLSMLFLGGGWALFYRYGKFSYGVDFGCLWKTTLMILITTIALGVPQYYNTRFSAE HGRDGDSVTLTPDRIEYVSRKGEKKMFLYKDIVSIYQEQITYNPPPQVFIVANNAGLRDSITVTDGKDGLPDAGKMLSEL SKRSGVTVKRP >Mature_170_residues TDLFQYPMSFPGWWLDNYYYVTWFLSMLFLGGGWALFYRYGKFSYGVDFGCLWKTTLMILITTIALGVPQYYNTRFSAEH GRDGDSVTLTPDRIEYVSRKGEKKMFLYKDIVSIYQEQITYNPPPQVFIVANNAGLRDSITVTDGKDGLPDAGKMLSELS KRSGVTVKRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19629; Mature: 19498
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLFQYPMSFPGWWLDNYYYVTWFLSMLFLGGGWALFYRYGKFSYGVDFGCLWKTTLMI CCCCHHCCCCCCCEECCCCHHHHHHHHHHHHCCCHHEEEECCCCCCCCCHHHHHHHHHHH LITTIALGVPQYYNTRFSAEHGRDGDSVTLTPDRIEYVSRKGEKKMFLYKDIVSIYQEQI HHHHHHHCCCHHHCCCCCCCCCCCCCEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHC TYNPPPQVFIVANNAGLRDSITVTDGKDGLPDAGKMLSELSKRSGVTVKRP CCCCCCCEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEECC >Mature Secondary Structure TDLFQYPMSFPGWWLDNYYYVTWFLSMLFLGGGWALFYRYGKFSYGVDFGCLWKTTLMI CCCHHCCCCCCCEECCCCHHHHHHHHHHHHCCCHHEEEECCCCCCCCCHHHHHHHHHHH LITTIALGVPQYYNTRFSAEHGRDGDSVTLTPDRIEYVSRKGEKKMFLYKDIVSIYQEQI HHHHHHHCCCHHHCCCCCCCCCCCCCEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHC TYNPPPQVFIVANNAGLRDSITVTDGKDGLPDAGKMLSELSKRSGVTVKRP CCCCCCCEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA