| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is folD [H]
Identifier: 193212353
GI number: 193212353
Start: 732555
End: 733445
Strand: Direct
Name: folD [H]
Synonym: Cpar_0686
Alternate gene names: 193212353
Gene position: 732555-733445 (Clockwise)
Preceding gene: 193212351
Following gene: 193212354
Centisome position: 32.0
GC content: 57.91
Gene sequence:
>891_bases ATGAAAGCACTTGACCCGAGCCCAATCGCCGCCGCATTTCGTGATGCCGTCCGCCGGGAGATCAGCGATGAAAAGCTGAG CATCAATATCGTCGGCATTCTGGCCTCCGATGATCCCGCATCGGCAACCTACGCAGACTACACTCGGGCGGGGTGTGAGG ATGTCGGCATCAGCTTCGATCTGCGCAAAACCAGTCCCGAATCGGTCAGGAACATGCTTGAATCGGCCAATGCGGATTCA GACGTTCACGGCATTTTCGTCTATTATCCGATCTGGGGCGACAGCCGCGATGCCGAGCTTCGTGACCTGATTTCGCCGCA CAAGGATGTCGAGGGGCTCTGTCCGCACTGGATCAGCAAGCTCTACGCCAACGAGCGTTTCGACGATGAGGCGCGAAAGT TCAAGGCGATTCTGCCCTGCACACCGCTGGCCATCCTCAAGCTGCTCGAAGAGACCGAGGCCTACATTCCCTACGGCTTG CCGTTCGGCGGTCAGCAGATCACCATTTTCAACCGTTCGGAAGTGGTCGGCAGGCCGCTCGCCTACATGCTCTCAAACGA CGGTGCGAGGGTCTATTCGTTCGACATCGACGGCGGCTTCGTGGTTGATGTCAACGATCCCGGCCACGAGCGCGTGCCAG TTACCCGCGAGGAGGCGTTGAGACAGTCGGACATCGTGATTACCGGCGTGCCTTCAAAAGTGTTCGACAAGATCAAAGCC GATGAGCTGAAGTCGGGCGCAGTTTGCCTGAACTTCTCTTCAATCCAGAATTTCGAGCCGGATGCCAAGGAATCGGCCGG GCTCTACATTCCGAGGGTCGGCCCCATGACGGTGGCCATGTGCATGCGCAACGCCCTGCAACTCTATCGCAACTACCATC ATGAAGCCTGA
Upstream 100 bases:
>100_bases CGTTTCGGAAGCATTTCGGACAAAGCGCAGCGTGCTCCGTCGGAGTCACCATCCCTCTCTTTTGCCCGTACAGATTTGTC ACACACAGCCTTGTTGATTC
Downstream 100 bases:
>100_bases CGGTACGCTTGAATCGACCACCATTGCCGCCTACCTCGGTCGGCTCGCCAGCGGTGATCCCACGCCGGGTGGTGGGGCGG CAGCGGCAGTGACGGCCGCA
Product: tetrahydrofolate dehydrogenase/cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase [H]
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MKALDPSPIAAAFRDAVRREISDEKLSINIVGILASDDPASATYADYTRAGCEDVGISFDLRKTSPESVRNMLESANADS DVHGIFVYYPIWGDSRDAELRDLISPHKDVEGLCPHWISKLYANERFDDEARKFKAILPCTPLAILKLLEETEAYIPYGL PFGGQQITIFNRSEVVGRPLAYMLSNDGARVYSFDIDGGFVVDVNDPGHERVPVTREEALRQSDIVITGVPSKVFDKIKA DELKSGAVCLNFSSIQNFEPDAKESAGLYIPRVGPMTVAMCMRNALQLYRNYHHEA
Sequences:
>Translated_296_residues MKALDPSPIAAAFRDAVRREISDEKLSINIVGILASDDPASATYADYTRAGCEDVGISFDLRKTSPESVRNMLESANADS DVHGIFVYYPIWGDSRDAELRDLISPHKDVEGLCPHWISKLYANERFDDEARKFKAILPCTPLAILKLLEETEAYIPYGL PFGGQQITIFNRSEVVGRPLAYMLSNDGARVYSFDIDGGFVVDVNDPGHERVPVTREEALRQSDIVITGVPSKVFDKIKA DELKSGAVCLNFSSIQNFEPDAKESAGLYIPRVGPMTVAMCMRNALQLYRNYHHEA >Mature_296_residues MKALDPSPIAAAFRDAVRREISDEKLSINIVGILASDDPASATYADYTRAGCEDVGISFDLRKTSPESVRNMLESANADS DVHGIFVYYPIWGDSRDAELRDLISPHKDVEGLCPHWISKLYANERFDDEARKFKAILPCTPLAILKLLEETEAYIPYGL PFGGQQITIFNRSEVVGRPLAYMLSNDGARVYSFDIDGGFVVDVNDPGHERVPVTREEALRQSDIVITGVPSKVFDKIKA DELKSGAVCLNFSSIQNFEPDAKESAGLYIPRVGPMTVAMCMRNALQLYRNYHHEA
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate [H]
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family [H]
Homologues:
Organism=Homo sapiens, GI222136639, Length=326, Percent_Identity=26.9938650306748, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI94721354, Length=310, Percent_Identity=26.7741935483871, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI222418558, Length=276, Percent_Identity=26.4492753623188, Blast_Score=71, Evalue=1e-12, Organism=Escherichia coli, GI1786741, Length=278, Percent_Identity=27.6978417266187, Blast_Score=89, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17568735, Length=237, Percent_Identity=28.2700421940928, Blast_Score=75, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6322933, Length=304, Percent_Identity=39.4736842105263, Blast_Score=219, Evalue=6e-58, Organism=Saccharomyces cerevisiae, GI6319558, Length=311, Percent_Identity=25.4019292604502, Blast_Score=71, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6321643, Length=314, Percent_Identity=26.7515923566879, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI17136818, Length=286, Percent_Identity=25.8741258741259, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI17136816, Length=286, Percent_Identity=25.8741258741259, Blast_Score=76, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 [H]
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C [H]
EC number: =1.5.1.5; =3.5.4.9 [H]
Molecular weight: Translated: 32881; Mature: 32881
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALDPSPIAAAFRDAVRREISDEKLSINIVGILASDDPASATYADYTRAGCEDVGISFD CCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCHHHHHHCCHHHCCCEEE LRKTSPESVRNMLESANADSDVHGIFVYYPIWGDSRDAELRDLISPHKDVEGLCPHWISK ECCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHHHCCCCCCHHHCCHHHHHH LYANERFDDEARKFKAILPCTPLAILKLLEETEAYIPYGLPFGGQQITIFNRSEVVGRPL HHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHCCCC AYMLSNDGARVYSFDIDGGFVVDVNDPGHERVPVTREEALRQSDIVITGVPSKVFDKIKA EEEECCCCCEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHCCEEEECCCHHHHHHHHH DELKSGAVCLNFSSIQNFEPDAKESAGLYIPRVGPMTVAMCMRNALQLYRNYHHEA HHCCCCEEEEEEHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKALDPSPIAAAFRDAVRREISDEKLSINIVGILASDDPASATYADYTRAGCEDVGISFD CCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCHHHHHHCCHHHCCCEEE LRKTSPESVRNMLESANADSDVHGIFVYYPIWGDSRDAELRDLISPHKDVEGLCPHWISK ECCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHHHCCCCCCHHHCCHHHHHH LYANERFDDEARKFKAILPCTPLAILKLLEETEAYIPYGLPFGGQQITIFNRSEVVGRPL HHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHCCCC AYMLSNDGARVYSFDIDGGFVVDVNDPGHERVPVTREEALRQSDIVITGVPSKVFDKIKA EEEECCCCCEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHCCEEEECCCHHHHHHHHH DELKSGAVCLNFSSIQNFEPDAKESAGLYIPRVGPMTVAMCMRNALQLYRNYHHEA HHCCCCEEEEEEHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA