Click here to switch to the map view.

The map label for this gene is yqgE [C]

Identifier: 193212329

GI number: 193212329

Start: 709631

End: 710194

Strand: Direct

Name: yqgE [C]

Synonym: Cpar_0662

Alternate gene names: 193212329

Gene position: 709631-710194 (Clockwise)

Preceding gene: 193212328

Following gene: 193212330

Centisome position: 31.0

GC content: 54.96

Gene sequence:

>564_bases
ATGGATAACGAATTTGAAATGCTCAAAGCGGGCAAGTTGCTGATTGCTTCGGCTAATCTGCTTGAATCCAATTTCAAGCG
GACCGTTCTGCTTATGTGCGAGCACAATGACGAGGGCTCTATCGGTTTCATTCTGAACAAACCGATGGAGTTCAAGGTCT
GCGAGGCCATCAGCGGCTTCGACGAGATCGATGAGCCGTTGCACATGGGTGGCCCGGTGCAGGTCGATACGGTACACTTT
CTGCACACCCGTGGCGATGTGATTGACGATGCTCAGGAAGTTCTGCCCGGACTGTTCTGGGGCGGCGACAAGGAGCAACT
CAGCTACCTGATCAACACTGGCGTCATCAGGCCGTCCGAAGTGCGCTTCTTTCTCGGTTACGCCGGCTGGAGCGCAGGTC
AGCTCAAGGATGAGTTCGAAGAGGGTTCATGGTACACTGCCGATGCGTCGAACGAGCAGGTTTTCACCGACGAGTACGAG
CGCATGTGGAGCCGAACCGTCCGATCCAAAGGCGGTGATTACTGCCTTGTTGCCAATTCTCCCGAGCTGCCGGGTATGAA
CTGA

Upstream 100 bases:

>100_bases
GATTGATGAACAGGGCGTTATCGAAAAGGTGTGGCCGAAGGTCAAACCGGAAATACATGCAGCGGAAGTGCTTGAGTGGT
TGCAGCAAAAAGCGTGATAC

Downstream 100 bases:

>100_bases
TTGAAAAAACGCATCAGGGGTGTATCCACAGATTCTGAAAGGGCAGTTCCAGCAAGTTGGGACTGCCCTCTCTGTTTTCA
GGCAAGCGCTTCAGATTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MDNEFEMLKAGKLLIASANLLESNFKRTVLLMCEHNDEGSIGFILNKPMEFKVCEAISGFDEIDEPLHMGGPVQVDTVHF
LHTRGDVIDDAQEVLPGLFWGGDKEQLSYLINTGVIRPSEVRFFLGYAGWSAGQLKDEFEEGSWYTADASNEQVFTDEYE
RMWSRTVRSKGGDYCLVANSPELPGMN

Sequences:

>Translated_187_residues
MDNEFEMLKAGKLLIASANLLESNFKRTVLLMCEHNDEGSIGFILNKPMEFKVCEAISGFDEIDEPLHMGGPVQVDTVHF
LHTRGDVIDDAQEVLPGLFWGGDKEQLSYLINTGVIRPSEVRFFLGYAGWSAGQLKDEFEEGSWYTADASNEQVFTDEYE
RMWSRTVRSKGGDYCLVANSPELPGMN
>Mature_187_residues
MDNEFEMLKAGKLLIASANLLESNFKRTVLLMCEHNDEGSIGFILNKPMEFKVCEAISGFDEIDEPLHMGGPVQVDTVHF
LHTRGDVIDDAQEVLPGLFWGGDKEQLSYLINTGVIRPSEVRFFLGYAGWSAGQLKDEFEEGSWYTADASNEQVFTDEYE
RMWSRTVRSKGGDYCLVANSPELPGMN

Specific function: Unknown

COG id: COG1678

COG function: function code K; Putative transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0301 (AlgH) family

Homologues:

Organism=Escherichia coli, GI87082187, Length=183, Percent_Identity=31.6939890710383, Blast_Score=80, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y662_CHLP8 (B3QMC9)

Other databases:

- EMBL:   CP001099
- RefSeq:   YP_001998282.1
- ProteinModelPortal:   B3QMC9
- GeneID:   6419580
- GenomeReviews:   CP001099_GR
- KEGG:   cpc:Cpar_0662
- HOGENOM:   HBG530212
- OMA:   LIAMPGM
- ProtClustDB:   CLSK637423
- HAMAP:   MF_00758
- InterPro:   IPR003774

Pfam domain/function: PF02622 DUF179

EC number: NA

Molecular weight: Translated: 21012; Mature: 21012

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNEFEMLKAGKLLIASANLLESNFKRTVLLMCEHNDEGSIGFILNKPMEFKVCEAISGF
CCCHHHHHHCCEEEEEEHHHHHCCCCEEEEEEEECCCCCCEEEEECCCCCHHHHHHHCCH
DEIDEPLHMGGPVQVDTVHFLHTRGDVIDDAQEVLPGLFWGGDKEQLSYLINTGVIRPSE
HHHCCCHHCCCCEEEEEEEEEECCCCCHHHHHHHHCHHHCCCCHHHHHHHHHCCCCCCCC
VRFFLGYAGWSAGQLKDEFEEGSWYTADASNEQVFTDEYERMWSRTVRSKGGDYCLVANS
EEEEEEECCCCCCCCHHHHHCCCEEEECCCCCCEEHHHHHHHHHHHHHCCCCCEEEEECC
PELPGMN
CCCCCCC
>Mature Secondary Structure
MDNEFEMLKAGKLLIASANLLESNFKRTVLLMCEHNDEGSIGFILNKPMEFKVCEAISGF
CCCHHHHHHCCEEEEEEHHHHHCCCCEEEEEEEECCCCCCEEEEECCCCCHHHHHHHCCH
DEIDEPLHMGGPVQVDTVHFLHTRGDVIDDAQEVLPGLFWGGDKEQLSYLINTGVIRPSE
HHHCCCHHCCCCEEEEEEEEEECCCCCHHHHHHHHCHHHCCCCHHHHHHHHHCCCCCCCC
VRFFLGYAGWSAGQLKDEFEEGSWYTADASNEQVFTDEYERMWSRTVRSKGGDYCLVANS
EEEEEEECCCCCCCCHHHHHCCCEEEECCCCCCEEHHHHHHHHHHHHHCCCCCEEEEECC
PELPGMN
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA