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The map label for this gene is omp16 [H]

Identifier: 193212309

GI number: 193212309

Start: 687481

End: 687990

Strand: Direct

Name: omp16 [H]

Synonym: Cpar_0642

Alternate gene names: 193212309

Gene position: 687481-687990 (Clockwise)

Preceding gene: 193212308

Following gene: 193212310

Centisome position: 30.03

GC content: 50.78

Gene sequence:

>510_bases
ATGAGACACACATTACCTGGTTTTATCGGTGCTGCCATGATTATTCTGGCGGGTTGTTCTTCGAAAAGTGCGGTATCGAC
CTCTGGAGACGCTTCAGGTGCCGGGTATGGAGCTGGGGCTGACGGTGCCACATCGGGTGTAACCGTTGAGAATCTTTCGG
GTGACAACGCTGTTGCCGGTGCAGTTATTGGGGATATTTTCTTTGATTTCGACAGTTCAGCCCTGAGTGACGAAGCTCAA
GAGCAATTGAAGCAGAATGCCGCATGGATGGAGAAAAATCCTCTGGTCAATGCAACCATCCAGGGACATTGCGACGAACG
TGGTACCGATGAATACAACCTGGCGCTCGGCGAACGCCGTGCCACTGCTGCTAAAGAGTATCTGATTACTGCCGGTGTCA
GCGCAGGCCGTCTTACAGCGGTAAGTTTTGGCGAGGAAATGCCTTTTGATCCCGGCCACAATGAAGAGGCTTGGGCTAAA
AATAGACGGGATCATTTCATTACGAAATAA

Upstream 100 bases:

>100_bases
ATTTCGTAGAGAAATAATGATTTGATGTTGATTATCCGGAGAGTCTGCGGGCTCTCCGGTTTTTTTGCTGATAAACGCTC
AACAAATTGAGAGGAACAGT

Downstream 100 bases:

>100_bases
CCGTCTCATCGAATCTTCTTACCGGAGACCGGGCATTGCCCGGTGCCCCGGTATTTACTTTTATAGATGAACCAATGTTG
GATCTATGATGAAAAAACGA

Product: peptidoglycan-associated lipoprotein

Products: NA

Alternate protein names: 16.5 kDa minor OMP; 16 kDa OMP; Minor outer membrane protein omp16 [H]

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MRHTLPGFIGAAMIILAGCSSKSAVSTSGDASGAGYGAGADGATSGVTVENLSGDNAVAGAVIGDIFFDFDSSALSDEAQ
EQLKQNAAWMEKNPLVNATIQGHCDERGTDEYNLALGERRATAAKEYLITAGVSAGRLTAVSFGEEMPFDPGHNEEAWAK
NRRDHFITK

Sequences:

>Translated_169_residues
MRHTLPGFIGAAMIILAGCSSKSAVSTSGDASGAGYGAGADGATSGVTVENLSGDNAVAGAVIGDIFFDFDSSALSDEAQ
EQLKQNAAWMEKNPLVNATIQGHCDERGTDEYNLALGERRATAAKEYLITAGVSAGRLTAVSFGEEMPFDPGHNEEAWAK
NRRDHFITK
>Mature_169_residues
MRHTLPGFIGAAMIILAGCSSKSAVSTSGDASGAGYGAGADGATSGVTVENLSGDNAVAGAVIGDIFFDFDSSALSDEAQ
EQLKQNAAWMEKNPLVNATIQGHCDERGTDEYNLALGERRATAAKEYLITAGVSAGRLTAVSFGEEMPFDPGHNEEAWAK
NRRDHFITK

Specific function: Thought To Play A Role In Bacterial Envelope Integrity. Very Strongly Associated With The Peptidoglycan. [C]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1786962, Length=166, Percent_Identity=36.7469879518072, Blast_Score=110, Evalue=6e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 17644; Mature: 17644

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHTLPGFIGAAMIILAGCSSKSAVSTSGDASGAGYGAGADGATSGVTVENLSGDNAVAG
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHH
AVIGDIFFDFDSSALSDEAQEQLKQNAAWMEKNPLVNATIQGHCDERGTDEYNLALGERR
HHHHHHHHCCCCHHCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCHH
ATAAKEYLITAGVSAGRLTAVSFGEEMPFDPGHNEEAWAKNRRDHFITK
HHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCC
>Mature Secondary Structure
MRHTLPGFIGAAMIILAGCSSKSAVSTSGDASGAGYGAGADGATSGVTVENLSGDNAVAG
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHH
AVIGDIFFDFDSSALSDEAQEQLKQNAAWMEKNPLVNATIQGHCDERGTDEYNLALGERR
HHHHHHHHCCCCHHCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCHH
ATAAKEYLITAGVSAGRLTAVSFGEEMPFDPGHNEEAWAKNRRDHFITK
HHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8063379; 10456959 [H]