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The map label for this gene is yfhC [C]

Identifier: 193212272

GI number: 193212272

Start: 649442

End: 649888

Strand: Direct

Name: yfhC [C]

Synonym: Cpar_0605

Alternate gene names: 193212272

Gene position: 649442-649888 (Clockwise)

Preceding gene: 193212271

Following gene: 193212273

Centisome position: 28.37

GC content: 61.3

Gene sequence:

>447_bases
ATGGACAGAGATCGGGAGTTTATGGCGCTGGCCCTCGAACAGGCGAGGAAAAGCTATGAAGAGGGCGGCGTGCCGGTCGG
GGCGGTGATGGTTGAAAATGGCAAGCTCATCGCCGCCGGCCATAACCAGCGCGTGCAGAACGCCGACCCGATTGCGCACG
GCGAGATGGACTGCATTCGGAAAGCGGGCCGCCGCGCCCGGTACGACACCGTGACGCTCTACACAACGCTTTCGCCCTGC
ATGATGTGCGCGGGTGCAATCGTGCAATTCGGCATCGGGCGGGTCGTTGTCGGGGAGGACAGGAACTTCAAGGGCAACGC
CGAATTCCTCCGCGAGCATGGCGTCGAAGTCACGCTTCTTGACGACGAAGGGTGCCGTGCCCTGATGGACACCTTCATAG
CCGAACGCCCCGATTTGTGGGATGAGGATATTGCCGGTAATGAGTGA

Upstream 100 bases:

>100_bases
AACGGCAAGAACATGACCTCGATTTTCCGGAAATCTCCGGTTCTCGGCTGGTACTTCTTCATCGCCCAAGAGGCCCAAGA
GGCCCAAGAGGTCAAGTAAG

Downstream 100 bases:

>100_bases
AAAACTGATGAGAGCGGCAGGGCATTGCGTCCGCTTCAGAACGCCAAGTGGAGCGTTTTCATGACTTGGTTCAAGAGAAG
CTTGCAGGCGTTGGTGCCGG

Product: zinc-binding CMP/dCMP deaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MDRDREFMALALEQARKSYEEGGVPVGAVMVENGKLIAAGHNQRVQNADPIAHGEMDCIRKAGRRARYDTVTLYTTLSPC
MMCAGAIVQFGIGRVVVGEDRNFKGNAEFLREHGVEVTLLDDEGCRALMDTFIAERPDLWDEDIAGNE

Sequences:

>Translated_148_residues
MDRDREFMALALEQARKSYEEGGVPVGAVMVENGKLIAAGHNQRVQNADPIAHGEMDCIRKAGRRARYDTVTLYTTLSPC
MMCAGAIVQFGIGRVVVGEDRNFKGNAEFLREHGVEVTLLDDEGCRALMDTFIAERPDLWDEDIAGNE
>Mature_148_residues
MDRDREFMALALEQARKSYEEGGVPVGAVMVENGKLIAAGHNQRVQNADPIAHGEMDCIRKAGRRARYDTVTLYTTLSPC
MMCAGAIVQFGIGRVVVGEDRNFKGNAEFLREHGVEVTLLDDEGCRALMDTFIAERPDLWDEDIAGNE

Specific function: Mutation In This Protein Makes E.Coli Resistant To The Toxic Proteins Encoded By The Gef Gene Family. [C]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Escherichia coli, GI145693172, Length=143, Percent_Identity=39.8601398601399, Blast_Score=89, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17554608, Length=97, Percent_Identity=41.2371134020619, Blast_Score=74, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17541138, Length=109, Percent_Identity=36.697247706422, Blast_Score=68, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6325319, Length=147, Percent_Identity=46.2585034013605, Blast_Score=133, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 16377; Mature: 16377

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRDREFMALALEQARKSYEEGGVPVGAVMVENGKLIAAGHNQRVQNADPIAHGEMDCIR
CCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEECCCCCCCCCCCCCCCHHHHHH
KAGRRARYDTVTLYTTLSPCMMCAGAIVQFGIGRVVVGEDRNFKGNAEFLREHGVEVTLL
HHCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHCCCEEEEE
DDEGCRALMDTFIAERPDLWDEDIAGNE
CCCCHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MDRDREFMALALEQARKSYEEGGVPVGAVMVENGKLIAAGHNQRVQNADPIAHGEMDCIR
CCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEECCCCCCCCCCCCCCCHHHHHH
KAGRRARYDTVTLYTTLSPCMMCAGAIVQFGIGRVVVGEDRNFKGNAEFLREHGVEVTLL
HHCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHCCCEEEEE
DDEGCRALMDTFIAERPDLWDEDIAGNE
CCCCHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10993077 [H]