| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193212273
Identifier: 193212273
GI number: 193212273
Start: 649949
End: 650593
Strand: Direct
Name: 193212273
Synonym: Cpar_0606
Alternate gene names: NA
Gene position: 649949-650593 (Clockwise)
Preceding gene: 193212272
Following gene: 193212274
Centisome position: 28.39
GC content: 54.73
Gene sequence:
>645_bases ATGACTTGGTTCAAGAGAAGCTTGCAGGCGTTGGTGCCGGTGGTGATGATCCTGATCGTCATGGCGGTGATGAACGGGTC GGCGAAAGAGGAGCCAGCGCCGAACGCCCTTGCCTTGCACATCGATGAGCAAGCGGTTGAAAACGGTGACATGATTTTTC GCCGTGGCGTGGGATTGGTGAGCGATTTTGTCGTTTCGGTTGACCAAGCATCCCGGTTCTCCCATGTCGGGATTATCTGC AAACAGGACGGGCAGACCTATGTGATCCATATTCTTCCCGATGAAGGGCGTGGTGATGACGATTCCGTGCGAATGGAACC TCTTTCTCTTTTCCTGTCGCCCGCCAATGCTTCCGGTTTTGCCGTATGCCGCTTGTCCGGCAAGCATCGCGCAGTTGCGC AGCGTGCTGCCAGCCAGGCGCTCGCCTTTTGGAAAAAACAGGTATGTTACGACTACGACCTCGATGCCTCCAATGCTCGA CGCCTCTATTGCTCGGAACTGGTCTGGCAGGCATACAAAATGGCCGGGATCGACCTTACCGACGGCGTGTTGCAACGGGT GACCATTCCGTTCTATCAGGGGCGATATGTCCTGATTTCGAGGTTGCTGAACAGCCGCTGGCTTGAAACTCTACAACAAC AATAA
Upstream 100 bases:
>100_bases CCCCGATTTGTGGGATGAGGATATTGCCGGTAATGAGTGAAAAACTGATGAGAGCGGCAGGGCATTGCGTCCGCTTCAGA ACGCCAAGTGGAGCGTTTTC
Downstream 100 bases:
>100_bases AACAGGGAGGCGAGATGAAGCTGACATCTCTTCGTGCAACGGTGCTGGTTATGATGATGGCGTTACTGGCATCATGCGGT TTGTTCAAACCGGGGCCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MTWFKRSLQALVPVVMILIVMAVMNGSAKEEPAPNALALHIDEQAVENGDMIFRRGVGLVSDFVVSVDQASRFSHVGIIC KQDGQTYVIHILPDEGRGDDDSVRMEPLSLFLSPANASGFAVCRLSGKHRAVAQRAASQALAFWKKQVCYDYDLDASNAR RLYCSELVWQAYKMAGIDLTDGVLQRVTIPFYQGRYVLISRLLNSRWLETLQQQ
Sequences:
>Translated_214_residues MTWFKRSLQALVPVVMILIVMAVMNGSAKEEPAPNALALHIDEQAVENGDMIFRRGVGLVSDFVVSVDQASRFSHVGIIC KQDGQTYVIHILPDEGRGDDDSVRMEPLSLFLSPANASGFAVCRLSGKHRAVAQRAASQALAFWKKQVCYDYDLDASNAR RLYCSELVWQAYKMAGIDLTDGVLQRVTIPFYQGRYVLISRLLNSRWLETLQQQ >Mature_213_residues TWFKRSLQALVPVVMILIVMAVMNGSAKEEPAPNALALHIDEQAVENGDMIFRRGVGLVSDFVVSVDQASRFSHVGIICK QDGQTYVIHILPDEGRGDDDSVRMEPLSLFLSPANASGFAVCRLSGKHRAVAQRAASQALAFWKKQVCYDYDLDASNARR LYCSELVWQAYKMAGIDLTDGVLQRVTIPFYQGRYVLISRLLNSRWLETLQQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23954; Mature: 23823
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWFKRSLQALVPVVMILIVMAVMNGSAKEEPAPNALALHIDEQAVENGDMIFRRGVGLV CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECHHHHCCCCEEEHHCCHHH SDFVVSVDQASRFSHVGIICKQDGQTYVIHILPDEGRGDDDSVRMEPLSLFLSPANASGF HHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCCCCEEEEEEEEEEECCCCCCE AVCRLSGKHRAVAQRAASQALAFWKKQVCYDYDLDASNARRLYCSELVWQAYKMAGIDLT EEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCH DGVLQRVTIPFYQGRYVLISRLLNSRWLETLQQQ HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TWFKRSLQALVPVVMILIVMAVMNGSAKEEPAPNALALHIDEQAVENGDMIFRRGVGLV CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECHHHHCCCCEEEHHCCHHH SDFVVSVDQASRFSHVGIICKQDGQTYVIHILPDEGRGDDDSVRMEPLSLFLSPANASGF HHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCCCCEEEEEEEEEEECCCCCCE AVCRLSGKHRAVAQRAASQALAFWKKQVCYDYDLDASNARRLYCSELVWQAYKMAGIDLT EEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCH DGVLQRVTIPFYQGRYVLISRLLNSRWLETLQQQ HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA