| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193212250
Identifier: 193212250
GI number: 193212250
Start: 627147
End: 627698
Strand: Direct
Name: 193212250
Synonym: Cpar_0583
Alternate gene names: NA
Gene position: 627147-627698 (Clockwise)
Preceding gene: 193212249
Following gene: 193212251
Centisome position: 27.4
GC content: 57.79
Gene sequence:
>552_bases ATGGGATTGAACTGGCTGTTTACGACGATCATCTCCGTGCTGGTTCAGCCGGAGGCCTTCTGGAAAGACGCGAAGGAGCA GCTCGGCGAGGTCAATGCGATGCGCGATTACGCGACACCGCTGATTACGATTGCCCAGCTCTGCAAGCTGCCGTTCATCG GTGTTCCCCGGATGGCCATGCTGCTTGCCATCGCCGGATTTGTGATCGATGTCTCCGTGCTCTACCTCCTCTCCGGAGCG ATTGGATCGCTTGCCGGGCCTGACCGTTCTGATGCGTTGCACGTCGACGTAATGACCGTTCTCTGCTTTTCCCTCACGCC GGTCTGGCTTGCCGAACCGTTCTACATTCTCGGCGTTTGGCGCTGGCTGGTCATGGCTGCCGCGCTGCTTTACGCCGTGC TGATTGCCCGATTCGGCATGCACGCGCTGCTCGATCTCGAAAGCGCGAAGATCGAAGCACTGTCGAAAAAGTCCGGCGTC CTCATGGCCACGGCGACCTTTATTTCGTTTATGCTCATCGGCGGGCTGATCCGTTTTTTGACCTCTATATGA
Upstream 100 bases:
>100_bases GCAGCGATGCCGGAGGGAGGGTCGACGGTGCACTTCGAAATCTGGAAGGGCAAGGTAAAGCAGGATCCCCAGAAATGGCT CAGATAACAGGGAGAAGTTT
Downstream 100 bases:
>100_bases CGCTCCCTTTATGGAACCTCAAGACCTCCATCTCGATTACGGCCTGGTCGAATCGATTCTGATCCCTTTCATTCGCAACG AAATCAGGAAGTTCGGGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MGLNWLFTTIISVLVQPEAFWKDAKEQLGEVNAMRDYATPLITIAQLCKLPFIGVPRMAMLLAIAGFVIDVSVLYLLSGA IGSLAGPDRSDALHVDVMTVLCFSLTPVWLAEPFYILGVWRWLVMAAALLYAVLIARFGMHALLDLESAKIEALSKKSGV LMATATFISFMLIGGLIRFLTSI
Sequences:
>Translated_183_residues MGLNWLFTTIISVLVQPEAFWKDAKEQLGEVNAMRDYATPLITIAQLCKLPFIGVPRMAMLLAIAGFVIDVSVLYLLSGA IGSLAGPDRSDALHVDVMTVLCFSLTPVWLAEPFYILGVWRWLVMAAALLYAVLIARFGMHALLDLESAKIEALSKKSGV LMATATFISFMLIGGLIRFLTSI >Mature_182_residues GLNWLFTTIISVLVQPEAFWKDAKEQLGEVNAMRDYATPLITIAQLCKLPFIGVPRMAMLLAIAGFVIDVSVLYLLSGAI GSLAGPDRSDALHVDVMTVLCFSLTPVWLAEPFYILGVWRWLVMAAALLYAVLIARFGMHALLDLESAKIEALSKKSGVL MATATFISFMLIGGLIRFLTSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20009; Mature: 19878
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLNWLFTTIISVLVQPEAFWKDAKEQLGEVNAMRDYATPLITIAQLCKLPFIGVPRMAM CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH LLAIAGFVIDVSVLYLLSGAIGSLAGPDRSDALHVDVMTVLCFSLTPVWLAEPFYILGVW HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH RWLVMAAALLYAVLIARFGMHALLDLESAKIEALSKKSGVLMATATFISFMLIGGLIRFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH TSI HCC >Mature Secondary Structure GLNWLFTTIISVLVQPEAFWKDAKEQLGEVNAMRDYATPLITIAQLCKLPFIGVPRMAM CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH LLAIAGFVIDVSVLYLLSGAIGSLAGPDRSDALHVDVMTVLCFSLTPVWLAEPFYILGVW HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH RWLVMAAALLYAVLIARFGMHALLDLESAKIEALSKKSGVLMATATFISFMLIGGLIRFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH TSI HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA