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The map label for this gene is ycaC [H]

Identifier: 193212181

GI number: 193212181

Start: 551136

End: 551681

Strand: Direct

Name: ycaC [H]

Synonym: Cpar_0512

Alternate gene names: 193212181

Gene position: 551136-551681 (Clockwise)

Preceding gene: 193212179

Following gene: 193212184

Centisome position: 24.07

GC content: 52.93

Gene sequence:

>546_bases
ATGATCACTCCGAAAGAGACCCTGCTGCTCGTCATCGACATTCAAGGCAAGCTCGCCACTAGCGTTGTTCAGCCTGATCG
GCTCGTCAAAAACGTGAGCAAGCTTCTGAGAGCTTGCAATCTGCTTGAGGTTCCGGTGATCTACACCGAGCAGTATCCGA
AAGGTCTTGGCCCTACGGTTGGTGAGTTGAAAGAGCTTATCGGTCAGGAAACGCCATTCGAGAAGCTTTCGTTCAGTTGC
TGCGGCAATGATGATTTTATGAAGCGTCTGCGTTCGCTCGGTCGCAACGATATTCTCGTGGTCGGCATCGAGACTCATGT
GTGCGTTTATCAGACCTGCCGGGAGTTGCTTGAATTCGGCTACAATGTCCACCTGGTTACCGATGCCGTGTCGTCGAGAA
GTGAAGAGAACCGCGAGCTTGGCATCCGGTGCATCGAACGGGCCGGAGGTATGCCGACCAGCACCGAGATGGTGATTTTT
GAGCTGCAACGCATCGCCGAAGGGGAGACCTTCAAAGCGATCTCAAAGATCATTAAGGAGGACTGA

Upstream 100 bases:

>100_bases
ACCCCCTTGACAATCGTCATAATTGCTCTATTTTCAGAAACTTCAAAATTGTAGGAAATTGTCTCCAAGAAAAGCGTTAA
CTCTCTCATCAGCGACACCC

Downstream 100 bases:

>100_bases
GAGGCCAGTTTACGACTTTCGTTTCTAGCACCGAGAGCAGCCGTTTTTCAAGCTCTTCCGTGCCGTCGAGGAACTCCGGG
GCGATGGTCAGATAGCGGCA

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MITPKETLLLVIDIQGKLATSVVQPDRLVKNVSKLLRACNLLEVPVIYTEQYPKGLGPTVGELKELIGQETPFEKLSFSC
CGNDDFMKRLRSLGRNDILVVGIETHVCVYQTCRELLEFGYNVHLVTDAVSSRSEENRELGIRCIERAGGMPTSTEMVIF
ELQRIAEGETFKAISKIIKED

Sequences:

>Translated_181_residues
MITPKETLLLVIDIQGKLATSVVQPDRLVKNVSKLLRACNLLEVPVIYTEQYPKGLGPTVGELKELIGQETPFEKLSFSC
CGNDDFMKRLRSLGRNDILVVGIETHVCVYQTCRELLEFGYNVHLVTDAVSSRSEENRELGIRCIERAGGMPTSTEMVIF
ELQRIAEGETFKAISKIIKED
>Mature_181_residues
MITPKETLLLVIDIQGKLATSVVQPDRLVKNVSKLLRACNLLEVPVIYTEQYPKGLGPTVGELKELIGQETPFEKLSFSC
CGNDDFMKRLRSLGRNDILVVGIETHVCVYQTCRELLEFGYNVHLVTDAVSSRSEENRELGIRCIERAGGMPTSTEMVIF
ELQRIAEGETFKAISKIIKED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI209969695, Length=185, Percent_Identity=36.2162162162162, Blast_Score=103, Evalue=6e-23,
Organism=Homo sapiens, GI103471987, Length=178, Percent_Identity=34.2696629213483, Blast_Score=100, Evalue=5e-22,
Organism=Homo sapiens, GI13376007, Length=201, Percent_Identity=33.3333333333333, Blast_Score=94, Evalue=1e-19,
Organism=Escherichia coli, GI1787124, Length=165, Percent_Identity=28.4848484848485, Blast_Score=68, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17540156, Length=180, Percent_Identity=40.5555555555556, Blast_Score=134, Evalue=4e-32,
Organism=Drosophila melanogaster, GI19922924, Length=183, Percent_Identity=35.5191256830601, Blast_Score=114, Evalue=4e-26,
Organism=Drosophila melanogaster, GI21357489, Length=186, Percent_Identity=31.1827956989247, Blast_Score=89, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 20291; Mature: 20291

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITPKETLLLVIDIQGKLATSVVQPDRLVKNVSKLLRACNLLEVPVIYTEQYPKGLGPTV
CCCCCCEEEEEEECCCHHHHHHCCHHHHHHHHHHHHHHCCHHCCCEEECCCCCCCCCCCH
GELKELIGQETPFEKLSFSCCGNDDFMKRLRSLGRNDILVVGIETHVCVYQTCRELLEFG
HHHHHHHCCCCCHHHHEEECCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCC
YNVHLVTDAVSSRSEENRELGIRCIERAGGMPTSTEMVIFELQRIAEGETFKAISKIIKE
CCEEEEEHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCC
D
C
>Mature Secondary Structure
MITPKETLLLVIDIQGKLATSVVQPDRLVKNVSKLLRACNLLEVPVIYTEQYPKGLGPTV
CCCCCCEEEEEEECCCHHHHHHCCHHHHHHHHHHHHHHCCHHCCCEEECCCCCCCCCCCH
GELKELIGQETPFEKLSFSCCGNDDFMKRLRSLGRNDILVVGIETHVCVYQTCRELLEFG
HHHHHHHCCCCCHHHHEEECCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCC
YNVHLVTDAVSSRSEENRELGIRCIERAGGMPTSTEMVIFELQRIAEGETFKAISKIIKE
CCEEEEEHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]