| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193212150
Identifier: 193212150
GI number: 193212150
Start: 513648
End: 514106
Strand: Direct
Name: 193212150
Synonym: Cpar_0481
Alternate gene names: NA
Gene position: 513648-514106 (Clockwise)
Preceding gene: 193212149
Following gene: 193212159
Centisome position: 22.44
GC content: 55.34
Gene sequence:
>459_bases ATGAGAGACCACACGCCGAATTTCAAAATGCTCGAACTTTCCGACGAGAGCAAGCGACTCATCAAAGATACGGTCACCCA GCTTTTGGAAAAGCTTTCCGGCGATGGTCAGCTTACTCCGGATGCGCGTCTTGAGTTCTGGGTCGAGATCCCCGGCGTGA AGCATCCCCGCGGGACCTTCCGGGGCGGCTGCCTCATGCCCGACAGCTATCTCTGTCTCTCAGACTGGTTCAAGGCTGGA ACTCCGGCAATCGAAGCTGGTGAGGAGTATGCCGAGAAAGAGCATCCGCTCGACGAGGCTTGGGCTGACCTGCTTGACGA GTTGTACTACCAGATCGAAATTTTCACCTCGATGGCCACAGCCAATCAGGGGATTACGATCGAACTCTGGGCTGGTACCC GGAATCGCCCTGAGTGCGAGTGGCTTTATGCCGTGGATAAAAAGATCGAGTTGCCGTAA
Upstream 100 bases:
>100_bases GATATTTCCGAATGATCGCTTCTCAGAGGTTGAAGCGCAACCAGCAGCGCCGTATATTGATACCAGAAATCGTTTTAGCA ACCGCTAACCTCCTCCAGCC
Downstream 100 bases:
>100_bases GAGAAAGAAGCGAACAAAAGAATGGAAAAGAGCGCTTGTTGCTCTTGACGGCAAGGGCGACCAGTTGGTCGCCCTTGATG TTTTGTGACTACGAAAGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MRDHTPNFKMLELSDESKRLIKDTVTQLLEKLSGDGQLTPDARLEFWVEIPGVKHPRGTFRGGCLMPDSYLCLSDWFKAG TPAIEAGEEYAEKEHPLDEAWADLLDELYYQIEIFTSMATANQGITIELWAGTRNRPECEWLYAVDKKIELP
Sequences:
>Translated_152_residues MRDHTPNFKMLELSDESKRLIKDTVTQLLEKLSGDGQLTPDARLEFWVEIPGVKHPRGTFRGGCLMPDSYLCLSDWFKAG TPAIEAGEEYAEKEHPLDEAWADLLDELYYQIEIFTSMATANQGITIELWAGTRNRPECEWLYAVDKKIELP >Mature_152_residues MRDHTPNFKMLELSDESKRLIKDTVTQLLEKLSGDGQLTPDARLEFWVEIPGVKHPRGTFRGGCLMPDSYLCLSDWFKAG TPAIEAGEEYAEKEHPLDEAWADLLDELYYQIEIFTSMATANQGITIELWAGTRNRPECEWLYAVDKKIELP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17408; Mature: 17408
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDHTPNFKMLELSDESKRLIKDTVTQLLEKLSGDGQLTPDARLEFWVEIPGVKHPRGTF CCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCC RGGCLMPDSYLCLSDWFKAGTPAIEAGEEYAEKEHPLDEAWADLLDELYYQIEIFTSMAT CCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH ANQGITIELWAGTRNRPECEWLYAVDKKIELP CCCCEEEEEECCCCCCCCCEEEEEECCEECCC >Mature Secondary Structure MRDHTPNFKMLELSDESKRLIKDTVTQLLEKLSGDGQLTPDARLEFWVEIPGVKHPRGTF CCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCC RGGCLMPDSYLCLSDWFKAGTPAIEAGEEYAEKEHPLDEAWADLLDELYYQIEIFTSMAT CCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH ANQGITIELWAGTRNRPECEWLYAVDKKIELP CCCCEEEEEECCCCCCCCCEEEEEECCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA