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The map label for this gene is yfhP [C]

Identifier: 193212159

GI number: 193212159

Start: 523366

End: 523794

Strand: Direct

Name: yfhP [C]

Synonym: Cpar_0490

Alternate gene names: 193212159

Gene position: 523366-523794 (Clockwise)

Preceding gene: 193212150

Following gene: 193212160

Centisome position: 22.86

GC content: 56.64

Gene sequence:

>429_bases
ATGAAAGTACTCAACAAAGAAACAGACTACGCCGTCCGGGCGCTCATCTCCCTTGGCATGAAATCCGATGGCTGGGTTTC
GGCGCGGGCGATTTCAGACGAGCAGGCGATACCCTACCAGTTCCTTCGCCGCATTCTGCAGGAGCTGATCCGCAACGGGC
TGGTGGAGTCGAAAGAGGGCGCTGGCGGCGGCGTGAAGCTCGCAAAAGAGCCCGGCGAAATCGGCGTGGCCGATGTGATC
GAAATCTTTCAGGGCAAGGTGCAGCTTTCGGAGTGCATGTTCCGCAAGCAGCTCTGCTCGAACCGCGCCAACTGCGTATT
GCGCCACGAAATCATGCGCATCGAAAAGATGGTGAATAACGAGTTTTCAAAGGTGACCATCGGCAAGCTGATCGATGATC
TGAAGGCGGTGGAAGCGATGAAGGGCTGA

Upstream 100 bases:

>100_bases
AGCGGAATTTTTTGCGAAAACAAAATCCACCGGGAATTTTTGCGATTCTGTTTGTTTTTCGATAAACTGATACTAAATTA
GTATCAGAAATTCAACGATT

Downstream 100 bases:

>100_bases
GTTACAGGTTCCCCGGCTTGAAAGCCGGGGCAATAAGAATGTAAGAGAGCTGAATGTCCGGAGGGTTGAAACCCTCCTGA
ATAAAAAAAAACAGGAAACA

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MKVLNKETDYAVRALISLGMKSDGWVSARAISDEQAIPYQFLRRILQELIRNGLVESKEGAGGGVKLAKEPGEIGVADVI
EIFQGKVQLSECMFRKQLCSNRANCVLRHEIMRIEKMVNNEFSKVTIGKLIDDLKAVEAMKG

Sequences:

>Translated_142_residues
MKVLNKETDYAVRALISLGMKSDGWVSARAISDEQAIPYQFLRRILQELIRNGLVESKEGAGGGVKLAKEPGEIGVADVI
EIFQGKVQLSECMFRKQLCSNRANCVLRHEIMRIEKMVNNEFSKVTIGKLIDDLKAVEAMKG
>Mature_142_residues
MKVLNKETDYAVRALISLGMKSDGWVSARAISDEQAIPYQFLRRILQELIRNGLVESKEGAGGGVKLAKEPGEIGVADVI
EIFQGKVQLSECMFRKQLCSNRANCVLRHEIMRIEKMVNNEFSKVTIGKLIDDLKAVEAMKG

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 15826; Mature: 15826

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLNKETDYAVRALISLGMKSDGWVSARAISDEQAIPYQFLRRILQELIRNGLVESKEG
CCCCCCHHHHHHHHHHHHCCCCCCCEEEHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
AGGGVKLAKEPGEIGVADVIEIFQGKVQLSECMFRKQLCSNRANCVLRHEIMRIEKMVNN
CCCCCEECCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
EFSKVTIGKLIDDLKAVEAMKG
CHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKVLNKETDYAVRALISLGMKSDGWVSARAISDEQAIPYQFLRRILQELIRNGLVESKEG
CCCCCCHHHHHHHHHHHHCCCCCCCEEEHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
AGGGVKLAKEPGEIGVADVIEIFQGKVQLSECMFRKQLCSNRANCVLRHEIMRIEKMVNN
CCCCCEECCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
EFSKVTIGKLIDDLKAVEAMKG
CHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]