| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193212083
Identifier: 193212083
GI number: 193212083
Start: 447677
End: 448699
Strand: Direct
Name: 193212083
Synonym: Cpar_0413
Alternate gene names: NA
Gene position: 447677-448699 (Clockwise)
Preceding gene: 193212082
Following gene: 193212085
Centisome position: 19.56
GC content: 57.77
Gene sequence:
>1023_bases ATGGACAGCGAGAAACTTCGTGCAGTAGCATCAGCTATTGTGTCGAACGGAAAAGGTGTTCTGGCGGCTGATGAGAGTAC CCCGACCATCAAAAAGCGGCTTGATTCGATCAATGTCGAGTCCACTGAGCCCACCCGGCGTCGGTATCGTGAACTTCTTT TTACCACCGATGGCATCGAGAGCTACATTGGTGGTGTAATCCTTTTCGATGAAACGATTCGCCAATCCACAATTGACGGT GTTCCTTTCGCGAGAGTGCTTTCCGAACGGGGGATTGTGCCCGGAATCAAGGTTGACAAAGGGGCAAAAGCGCTGGCACA GTATCCCGGCGAAAAGGTCACCGAGGGGCTGGATGGCCTGCGTGACCGGCTGATCGAGTATCGGGAACTTGGCGCAGGAT TTGCGAAGTGGCGGGCAGTGATCCAGATCGATGAACACGATATTCCGTCGCCGTCCGGCATCCGTGCGAATGCCCATGCG CTGGCTCGTTACGCCGCGCTTTGCCAGGAGCAGGACCTTGTGCCGATCGTCGAGCCCGAGGTGCTCATGGACGGCGCCCA CGGCATCGAGCGGTGCGAGGAGGTGACTTCAAGGGTGCTTGAGGCTGTGTTTTCCGAACTTGACGCGCATCGCGTACTGT TCGAGGGGATGTTGCTGAAGCCGAATATGGTGATCGCCGGCAAAAAATGCGCTCGCCAGAATAGCCCGGAAGAGGTTGCC GAAGCTACGATCCGCTGCTTGAACCGTTACGTTCCGGCTGCCGTGCCGGGCATCGTGTTTCTTTCCGGCGGTCAGAGCGC CGAGGAGGCCACCGCCAACCTGAATGCCATGAACGCGATGGGTTCGCATCCGTGGGAGGTCAGCTTCTCGTACGGACGCG CATTGCAGACCCCCGTGCTTGCTGCCTGGCAAGGACAGGAGAGAAATGTGGCCGCTGCACAGCAAGCGCTCTTCAAACGT AGCCGCCTGAACGGTCTTGCCCGATATGGCAAATACTCACAGGAGATGGAAGCTGAAGCGTGA
Upstream 100 bases:
>100_bases ATAACGGAGCTTTTCGGGAATCAAGGCGTATCGTTCATTGTTGGTGAAACGAATGGGGGAATTTCAGGATGTAAGGAATG CAAAACGAGAGGAGGAGTGT
Downstream 100 bases:
>100_bases ACTTGTTTTTTTATGTTCAACTTTCCCCTGTCGGTTCAGCAATGATCTGATTTTACCAGCCCGCCTCCAGCCCGAACGAG CTGGTCGTGCCGAGGTCAAG
Product: Fructose-bisphosphate aldolase
Products: NA
Alternate protein names: Fructose-biphosphate aldolase class I; FBP aldolase [H]
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MDSEKLRAVASAIVSNGKGVLAADESTPTIKKRLDSINVESTEPTRRRYRELLFTTDGIESYIGGVILFDETIRQSTIDG VPFARVLSERGIVPGIKVDKGAKALAQYPGEKVTEGLDGLRDRLIEYRELGAGFAKWRAVIQIDEHDIPSPSGIRANAHA LARYAALCQEQDLVPIVEPEVLMDGAHGIERCEEVTSRVLEAVFSELDAHRVLFEGMLLKPNMVIAGKKCARQNSPEEVA EATIRCLNRYVPAAVPGIVFLSGGQSAEEATANLNAMNAMGSHPWEVSFSYGRALQTPVLAAWQGQERNVAAAQQALFKR SRLNGLARYGKYSQEMEAEA
Sequences:
>Translated_340_residues MDSEKLRAVASAIVSNGKGVLAADESTPTIKKRLDSINVESTEPTRRRYRELLFTTDGIESYIGGVILFDETIRQSTIDG VPFARVLSERGIVPGIKVDKGAKALAQYPGEKVTEGLDGLRDRLIEYRELGAGFAKWRAVIQIDEHDIPSPSGIRANAHA LARYAALCQEQDLVPIVEPEVLMDGAHGIERCEEVTSRVLEAVFSELDAHRVLFEGMLLKPNMVIAGKKCARQNSPEEVA EATIRCLNRYVPAAVPGIVFLSGGQSAEEATANLNAMNAMGSHPWEVSFSYGRALQTPVLAAWQGQERNVAAAQQALFKR SRLNGLARYGKYSQEMEAEA >Mature_340_residues MDSEKLRAVASAIVSNGKGVLAADESTPTIKKRLDSINVESTEPTRRRYRELLFTTDGIESYIGGVILFDETIRQSTIDG VPFARVLSERGIVPGIKVDKGAKALAQYPGEKVTEGLDGLRDRLIEYRELGAGFAKWRAVIQIDEHDIPSPSGIRANAHA LARYAALCQEQDLVPIVEPEVLMDGAHGIERCEEVTSRVLEAVFSELDAHRVLFEGMLLKPNMVIAGKKCARQNSPEEVA EATIRCLNRYVPAAVPGIVFLSGGQSAEEATANLNAMNAMGSHPWEVSFSYGRALQTPVLAAWQGQERNVAAAQQALFKR SRLNGLARYGKYSQEMEAEA
Specific function: Unknown
COG id: COG3588
COG function: function code G; Fructose-1,6-bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class I fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Homo sapiens, GI4885063, Length=331, Percent_Identity=52.8700906344411, Blast_Score=343, Evalue=1e-94, Organism=Homo sapiens, GI34577112, Length=339, Percent_Identity=52.8023598820059, Blast_Score=340, Evalue=8e-94, Organism=Homo sapiens, GI34577110, Length=339, Percent_Identity=52.8023598820059, Blast_Score=340, Evalue=8e-94, Organism=Homo sapiens, GI4557305, Length=339, Percent_Identity=52.8023598820059, Blast_Score=340, Evalue=8e-94, Organism=Homo sapiens, GI193794814, Length=339, Percent_Identity=52.8023598820059, Blast_Score=340, Evalue=8e-94, Organism=Homo sapiens, GI40354205, Length=331, Percent_Identity=52.5679758308157, Blast_Score=340, Evalue=1e-93, Organism=Caenorhabditis elegans, GI71983985, Length=330, Percent_Identity=53.6363636363636, Blast_Score=348, Evalue=2e-96, Organism=Caenorhabditis elegans, GI25150450, Length=333, Percent_Identity=51.6516516516517, Blast_Score=343, Evalue=9e-95, Organism=Caenorhabditis elegans, GI71983990, Length=236, Percent_Identity=51.271186440678, Blast_Score=238, Evalue=4e-63, Organism=Drosophila melanogaster, GI24650282, Length=331, Percent_Identity=54.0785498489426, Blast_Score=343, Evalue=1e-94, Organism=Drosophila melanogaster, GI24650280, Length=331, Percent_Identity=54.0785498489426, Blast_Score=343, Evalue=1e-94, Organism=Drosophila melanogaster, GI24650278, Length=331, Percent_Identity=54.0785498489426, Blast_Score=343, Evalue=1e-94, Organism=Drosophila melanogaster, GI221459619, Length=332, Percent_Identity=53.6144578313253, Blast_Score=342, Evalue=3e-94, Organism=Drosophila melanogaster, GI24650288, Length=332, Percent_Identity=53.6144578313253, Blast_Score=342, Evalue=3e-94, Organism=Drosophila melanogaster, GI45553577, Length=331, Percent_Identity=53.4743202416918, Blast_Score=338, Evalue=4e-93, Organism=Drosophila melanogaster, GI24650304, Length=331, Percent_Identity=45.9214501510574, Blast_Score=305, Evalue=2e-83,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000741 - InterPro: IPR013785 [H]
Pfam domain/function: PF00274 Glycolytic [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 37154; Mature: 37154
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: PS00158 ALDOLASE_CLASS_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSEKLRAVASAIVSNGKGVLAADESTPTIKKRLDSINVESTEPTRRRYRELLFTTDGIE CCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHH SYIGGVILFDETIRQSTIDGVPFARVLSERGIVPGIKVDKGAKALAQYPGEKVTEGLDGL HHHCCEEEEHHHHHHHHCCCCHHHHHHHHCCCCCCCEECCCHHHHHHCCCHHHHHHHHHH RDRLIEYRELGAGFAKWRAVIQIDEHDIPSPSGIRANAHALARYAALCQEQDLVPIVEPE HHHHHHHHHHCCCHHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHH VLMDGAHGIERCEEVTSRVLEAVFSELDAHRVLFEGMLLKPNMVIAGKKCARQNSPEEVA HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCEEEECHHHHCCCCHHHHH EATIRCLNRYVPAAVPGIVFLSGGQSAEEATANLNAMNAMGSHPWEVSFSYGRALQTPVL HHHHHHHHHHCCHHCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEHHCCHHCCCHH AAWQGQERNVAAAQQALFKRSRLNGLARYGKYSQEMEAEA HHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCC >Mature Secondary Structure MDSEKLRAVASAIVSNGKGVLAADESTPTIKKRLDSINVESTEPTRRRYRELLFTTDGIE CCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHH SYIGGVILFDETIRQSTIDGVPFARVLSERGIVPGIKVDKGAKALAQYPGEKVTEGLDGL HHHCCEEEEHHHHHHHHCCCCHHHHHHHHCCCCCCCEECCCHHHHHHCCCHHHHHHHHHH RDRLIEYRELGAGFAKWRAVIQIDEHDIPSPSGIRANAHALARYAALCQEQDLVPIVEPE HHHHHHHHHHCCCHHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHH VLMDGAHGIERCEEVTSRVLEAVFSELDAHRVLFEGMLLKPNMVIAGKKCARQNSPEEVA HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCEEEECHHHHCCCCHHHHH EATIRCLNRYVPAAVPGIVFLSGGQSAEEATANLNAMNAMGSHPWEVSFSYGRALQTPVL HHHHHHHHHHCCHHCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEHHCCHHCCCHH AAWQGQERNVAAAQQALFKRSRLNGLARYGKYSQEMEAEA HHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]