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The map label for this gene is rsgA

Identifier: 193212055

GI number: 193212055

Start: 410115

End: 411050

Strand: Direct

Name: rsgA

Synonym: Cpar_0385

Alternate gene names: 193212055

Gene position: 410115-411050 (Clockwise)

Preceding gene: 193212054

Following gene: 193212056

Centisome position: 17.91

GC content: 61.97

Gene sequence:

>936_bases
ATGAATGAAACCCTTTCCGGCGTGGTGACGCGGGTCACCGGTGCTACGTATATCGTTGAAACCGGCGATGGCCCGAAGGT
CAGGTGCAGAACCGTGCCCAGCACCGTCAGCGAAAACGAGGGGTCGAACCTCGTGGCGGTCGGCGATCGGGTCGAGTTCA
GGCCGAAAGCATCCGAGACCGAAATGGCGGAAGGCGTGATCGTCCGCGTCGAAGAGCGGCGTAGCGTGCTGGAGCGGCGG
CGGGAGGTGCGGCGCAACCGAAGCAAGGAGAAGGAGCAGGTCATCGCGGCCAATATCGACCAGATCGTCCTGATCACTTC
GTTCGATGATCCGCCGTTCAACAGCCGCCTGGTTGATCGCTACCTCGTGTTTGCCGAATCGGAGCACCTGCCGCTGCTGA
TCGTGGTCAACAAGATCGATCTCGACGAGGAGGGGATGGTCGAGGAGGATCTCGAAGTCTATCGAAATCTCGACTGCAAT
ATCTGCCTTGTCAGCGCGGAGGATGGCCGGGGCATCGAGGAGCTTCGCGAGCTGTTGCGCGACCGTTTGTCGGCTTTCAG
CGGCCACTCCGGCGTGGGCAAATCGACGCTCATCAACCTGCTCGTCGGGCGAGAGGAGCTGCGAACCGCCGAAACGAGCG
GCAAGACCGGCAAGGGTGTGCACACCACCACCAGCTCGGCGATGTTCCAGCTTCCGGGAGGCGGTTATGTGATCGACACG
CCGGGCATCCGCGAGTTCAACCTTGCCGGCATCACCCGCGAGAACCTGCGGTTTTACTATACCGAGTTCCTGCGCTTCAT
GCCGGAGTGCGCTTTCTCGTCATGCAGCCACACGGTCGAGCCGGGGTGTGCCGTGATCGCGGCAGTCGAATCGGGCCGCA
TCGATGCCGAACGCTACGAGAGCTACCTGGCGCTGCTCGACTCGCTCGATGAGTGA

Upstream 100 bases:

>100_bases
TGAATTGTTTATATTTCAAGCTTTGCGCTCCTGCCTCGTCGCATCCTGCCGAAGTTCGACAGTTCTGCGTAGTCGGGGAT
AATTCGTACCGCTTTGTTGC

Downstream 100 bases:

>100_bases
GTTGCCGTCTCCTTTTATTGCATATCTATTCGGAACCCATAAAGAACGCTTAGCTATGATCGTTACCATTAATCCAGCAA
CCGGCGAGAGGCTCGCCGAA

Product: ribosome small subunit-dependent GTPase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MNETLSGVVTRVTGATYIVETGDGPKVRCRTVPSTVSENEGSNLVAVGDRVEFRPKASETEMAEGVIVRVEERRSVLERR
REVRRNRSKEKEQVIAANIDQIVLITSFDDPPFNSRLVDRYLVFAESEHLPLLIVVNKIDLDEEGMVEEDLEVYRNLDCN
ICLVSAEDGRGIEELRELLRDRLSAFSGHSGVGKSTLINLLVGREELRTAETSGKTGKGVHTTTSSAMFQLPGGGYVIDT
PGIREFNLAGITRENLRFYYTEFLRFMPECAFSSCSHTVEPGCAVIAAVESGRIDAERYESYLALLDSLDE

Sequences:

>Translated_311_residues
MNETLSGVVTRVTGATYIVETGDGPKVRCRTVPSTVSENEGSNLVAVGDRVEFRPKASETEMAEGVIVRVEERRSVLERR
REVRRNRSKEKEQVIAANIDQIVLITSFDDPPFNSRLVDRYLVFAESEHLPLLIVVNKIDLDEEGMVEEDLEVYRNLDCN
ICLVSAEDGRGIEELRELLRDRLSAFSGHSGVGKSTLINLLVGREELRTAETSGKTGKGVHTTTSSAMFQLPGGGYVIDT
PGIREFNLAGITRENLRFYYTEFLRFMPECAFSSCSHTVEPGCAVIAAVESGRIDAERYESYLALLDSLDE
>Mature_311_residues
MNETLSGVVTRVTGATYIVETGDGPKVRCRTVPSTVSENEGSNLVAVGDRVEFRPKASETEMAEGVIVRVEERRSVLERR
REVRRNRSKEKEQVIAANIDQIVLITSFDDPPFNSRLVDRYLVFAESEHLPLLIVVNKIDLDEEGMVEEDLEVYRNLDCN
ICLVSAEDGRGIEELRELLRDRLSAFSGHSGVGKSTLINLLVGREELRTAETSGKTGKGVHTTTSSAMFQLPGGGYVIDT
PGIREFNLAGITRENLRFYYTEFLRFMPECAFSSCSHTVEPGCAVIAAVESGRIDAERYESYLALLDSLDE

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain

Homologues:

Organism=Escherichia coli, GI87082381, Length=312, Percent_Identity=39.1025641025641, Blast_Score=201, Evalue=6e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSGA_CHLP8 (B3QL20)

Other databases:

- EMBL:   CP001099
- RefSeq:   YP_001998008.1
- GeneID:   6419299
- GenomeReviews:   CP001099_GR
- KEGG:   cpc:Cpar_0385
- HOGENOM:   HBG652450
- OMA:   CLVAAYD
- HAMAP:   MF_01820
- InterPro:   IPR010914
- InterPro:   IPR016027
- InterPro:   IPR004881
- TIGRFAMs:   TIGR00157

Pfam domain/function: PF03193 DUF258; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 34590; Mature: 34590

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNETLSGVVTRVTGATYIVETGDGPKVRCRTVPSTVSENEGSNLVAVGDRVEFRPKASET
CCCHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCEEEECCCEEECCCCCCH
EMAEGVIVRVEERRSVLERRREVRRNRSKEKEQVIAANIDQIVLITSFDDPPFNSRLVDR
HHHCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHH
YLVFAESEHLPLLIVVNKIDLDEEGMVEEDLEVYRNLDCNICLVSAEDGRGIEELRELLR
HHEEECCCCCEEEEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHH
DRLSAFSGHSGVGKSTLINLLVGREELRTAETSGKTGKGVHTTTSSAMFQLPGGGYVIDT
HHHHHCCCCCCCCHHHHHHHHHCHHHHHHHHCCCCCCCCEEEECCCEEEECCCCCEEECC
PGIREFNLAGITRENLRFYYTEFLRFMPECAFSSCSHTVEPGCAVIAAVESGRIDAERYE
CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHH
SYLALLDSLDE
HHHHHHHHCCC
>Mature Secondary Structure
MNETLSGVVTRVTGATYIVETGDGPKVRCRTVPSTVSENEGSNLVAVGDRVEFRPKASET
CCCHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCEEEECCCEEECCCCCCH
EMAEGVIVRVEERRSVLERRREVRRNRSKEKEQVIAANIDQIVLITSFDDPPFNSRLVDR
HHHCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHH
YLVFAESEHLPLLIVVNKIDLDEEGMVEEDLEVYRNLDCNICLVSAEDGRGIEELRELLR
HHEEECCCCCEEEEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHH
DRLSAFSGHSGVGKSTLINLLVGREELRTAETSGKTGKGVHTTTSSAMFQLPGGGYVIDT
HHHHHCCCCCCCCHHHHHHHHHCHHHHHHHHCCCCCCCCEEEECCCEEEECCCCCEEECC
PGIREFNLAGITRENLRFYYTEFLRFMPECAFSSCSHTVEPGCAVIAAVESGRIDAERYE
CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHH
SYLALLDSLDE
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA