| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193211982
Identifier: 193211982
GI number: 193211982
Start: 326990
End: 328462
Strand: Direct
Name: 193211982
Synonym: Cpar_0309
Alternate gene names: NA
Gene position: 326990-328462 (Clockwise)
Preceding gene: 193211981
Following gene: 193211983
Centisome position: 14.28
GC content: 57.77
Gene sequence:
>1473_bases ATGCGAACAGGCTTTTTCTCGCGATTCCTTGTTTCCGCCACCATTGCCGTGCTTGGCCTGCCATGCTTCTCCGCCGAGCT TCTTGCCCGTGCTGGTGGTGGAGGTGGCGGGGGCGGAATCGGTGATGGAGGTGGGTTTTCTGGCGGCGGTGGAAATGGTA TCGATTACGCTTTCAATGGTTCTCGTGGTTATGGGGCGCCCGGCCAGTTCGACTTTTCAGTGGTTTTCACCGTCTTTTTT ATTCTCTTTATCCTCTTCGCCTTCTTCAGCGTCGTCGCGAAATTTCGCAAAAAATCGAACGAGAACGCATTCGGCGAGCC GGTGCCTGAAGCAACGCCCGACGCGCGGATCGACAACACGCCACTCTTTCCCGGAGCACCTCCTGGCTTCGATCAATCCG CCTTTCTCGCCAAAGTCCGCAAAGCCTTTCTCGAAGTGCAGCGGGCCTGGTCGGCGCAGAGCACGGACATGATGCGCCGA TTTATTTCCGACGGCGTCTATCAGCGATTCAACACCCAGTTCAAAATGATGCGCCTGCTTCAGCAGGGCAATCCGCTCAG CAACATCAACATCTCGATGGCTTGGGTTGATCGGATCGAGCAGGATGGCCGGTATGACATTGTCCATGCCGGCATCAAGG CGAGCATGACCGACCGGTTCATCTGCGCCCTGAACCATGACCTTGACGAAGAGGGGACGAACGAATTTGTCGAATACTGG TCGTTCATTCGCAAGCGCGGCGCGGCAGGCAAGGATATGTATGAGACCGAACAGTGCCCCAACTGCGGCGCGCCGCTGCC GAAGGATATGGGCGAAGTCTGCAAGTGCAACTACTGCAACGCAACGATCAACTCCGGCGAATTCGACTGGGTGCTCGCCG AAATCACCCAGCAGGACGATTACCGGAGAGACGGTGATCGTGCAGAGAAGATGCCCGGCCTCGACGCGAAAGTGGCTGAA ATGGTGACGGTCTATGGCGATTTTTCCGTGCAGCTCGTCGAAGACAAGGCCTCAAACGCCTGGATGCAGATGATGACCGC CAAGGCCATGCATAATCCCGCGATCATGCGGCGGTTCGTTGCAGACGACCTGTTCCGGCAGCTTGCGCCGAAGTACGAAC AGAACCGGGAGATTTTCAACCGCATTTTCCTGAATCGTGTGACGCTCATCAAGGCCGAACAGCGAGACGGGAAAAACATT CTTACCTTCGCGCTGACCGCCTCGATCCAGCGGGCGTCGCTCACCGGCAACAGCGTTCGGCTCATCGATCCGGAGATCGT GGAGCGCGAGGAGATCATGACGCTCACGAGGGATGCTACCGCCGGAGCCGGAAAAGGCTCGATCTACCAGCACACCTGCC CAGCCTGCGGCGCGCCAGTCAAGGACACGCTCGACCTCAAATGCGCCTTCTGCGGCAGCACCCTCAACAGTACGGCGAAC GACTGGGTTGTGAGTGGGTTGACAGGACGTTGA
Upstream 100 bases:
>100_bases CAGCTGAAGCAGATGCTCGACAATCAGCTGATCAGCCAGGAAGAGTACGATGCGAAAAAGCAGCAGATTCTTTCGCAACT GTAACCGGGTAACCGTTGCC
Downstream 100 bases:
>100_bases TGTGGGCTTGTGTAACTCTTAGCATTAAATCTGAGAACCTCATGAAAACCCCTGCCAGATATTTCCTCAGCCTGTTCCTC CTGCTCGCTATGATGGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MRTGFFSRFLVSATIAVLGLPCFSAELLARAGGGGGGGGIGDGGGFSGGGGNGIDYAFNGSRGYGAPGQFDFSVVFTVFF ILFILFAFFSVVAKFRKKSNENAFGEPVPEATPDARIDNTPLFPGAPPGFDQSAFLAKVRKAFLEVQRAWSAQSTDMMRR FISDGVYQRFNTQFKMMRLLQQGNPLSNINISMAWVDRIEQDGRYDIVHAGIKASMTDRFICALNHDLDEEGTNEFVEYW SFIRKRGAAGKDMYETEQCPNCGAPLPKDMGEVCKCNYCNATINSGEFDWVLAEITQQDDYRRDGDRAEKMPGLDAKVAE MVTVYGDFSVQLVEDKASNAWMQMMTAKAMHNPAIMRRFVADDLFRQLAPKYEQNREIFNRIFLNRVTLIKAEQRDGKNI LTFALTASIQRASLTGNSVRLIDPEIVEREEIMTLTRDATAGAGKGSIYQHTCPACGAPVKDTLDLKCAFCGSTLNSTAN DWVVSGLTGR
Sequences:
>Translated_490_residues MRTGFFSRFLVSATIAVLGLPCFSAELLARAGGGGGGGGIGDGGGFSGGGGNGIDYAFNGSRGYGAPGQFDFSVVFTVFF ILFILFAFFSVVAKFRKKSNENAFGEPVPEATPDARIDNTPLFPGAPPGFDQSAFLAKVRKAFLEVQRAWSAQSTDMMRR FISDGVYQRFNTQFKMMRLLQQGNPLSNINISMAWVDRIEQDGRYDIVHAGIKASMTDRFICALNHDLDEEGTNEFVEYW SFIRKRGAAGKDMYETEQCPNCGAPLPKDMGEVCKCNYCNATINSGEFDWVLAEITQQDDYRRDGDRAEKMPGLDAKVAE MVTVYGDFSVQLVEDKASNAWMQMMTAKAMHNPAIMRRFVADDLFRQLAPKYEQNREIFNRIFLNRVTLIKAEQRDGKNI LTFALTASIQRASLTGNSVRLIDPEIVEREEIMTLTRDATAGAGKGSIYQHTCPACGAPVKDTLDLKCAFCGSTLNSTAN DWVVSGLTGR >Mature_490_residues MRTGFFSRFLVSATIAVLGLPCFSAELLARAGGGGGGGGIGDGGGFSGGGGNGIDYAFNGSRGYGAPGQFDFSVVFTVFF ILFILFAFFSVVAKFRKKSNENAFGEPVPEATPDARIDNTPLFPGAPPGFDQSAFLAKVRKAFLEVQRAWSAQSTDMMRR FISDGVYQRFNTQFKMMRLLQQGNPLSNINISMAWVDRIEQDGRYDIVHAGIKASMTDRFICALNHDLDEEGTNEFVEYW SFIRKRGAAGKDMYETEQCPNCGAPLPKDMGEVCKCNYCNATINSGEFDWVLAEITQQDDYRRDGDRAEKMPGLDAKVAE MVTVYGDFSVQLVEDKASNAWMQMMTAKAMHNPAIMRRFVADDLFRQLAPKYEQNREIFNRIFLNRVTLIKAEQRDGKNI LTFALTASIQRASLTGNSVRLIDPEIVEREEIMTLTRDATAGAGKGSIYQHTCPACGAPVKDTLDLKCAFCGSTLNSTAN DWVVSGLTGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53996; Mature: 53996
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTGFFSRFLVSATIAVLGLPCFSAELLARAGGGGGGGGIGDGGGFSGGGGNGIDYAFNG CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECC SRGYGAPGQFDFSVVFTVFFILFILFAFFSVVAKFRKKSNENAFGEPVPEATPDARIDNT CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC PLFPGAPPGFDQSAFLAKVRKAFLEVQRAWSAQSTDMMRRFISDGVYQRFNTQFKMMRLL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QQGNPLSNINISMAWVDRIEQDGRYDIVHAGIKASMTDRFICALNHDLDEEGTNEFVEYW HCCCCCCCCEEEHHHHHHHHCCCCEEEEECCCHHCCCCCEEEEECCCCCCCHHHHHHHHH SFIRKRGAAGKDMYETEQCPNCGAPLPKDMGEVCKCNYCNATINSGEFDWVLAEITQQDD HHHHHHCCCCCCCHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCC YRRDGDRAEKMPGLDAKVAEMVTVYGDFSVQLVEDKASNAWMQMMTAKAMHNPAIMRRFV CCCCCCHHHHCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHH ADDLFRQLAPKYEQNREIFNRIFLNRVTLIKAEQRDGKNILTFALTASIQRASLTGNSVR HHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEEEHHHHHHHCCCCCEEE LIDPEIVEREEIMTLTRDATAGAGKGSIYQHTCPACGAPVKDTLDLKCAFCGSTLNSTAN EECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHCCCCC DWVVSGLTGR CCEECCCCCC >Mature Secondary Structure MRTGFFSRFLVSATIAVLGLPCFSAELLARAGGGGGGGGIGDGGGFSGGGGNGIDYAFNG CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECC SRGYGAPGQFDFSVVFTVFFILFILFAFFSVVAKFRKKSNENAFGEPVPEATPDARIDNT CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC PLFPGAPPGFDQSAFLAKVRKAFLEVQRAWSAQSTDMMRRFISDGVYQRFNTQFKMMRLL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QQGNPLSNINISMAWVDRIEQDGRYDIVHAGIKASMTDRFICALNHDLDEEGTNEFVEYW HCCCCCCCCEEEHHHHHHHHCCCCEEEEECCCHHCCCCCEEEEECCCCCCCHHHHHHHHH SFIRKRGAAGKDMYETEQCPNCGAPLPKDMGEVCKCNYCNATINSGEFDWVLAEITQQDD HHHHHHCCCCCCCHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCC YRRDGDRAEKMPGLDAKVAEMVTVYGDFSVQLVEDKASNAWMQMMTAKAMHNPAIMRRFV CCCCCCHHHHCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHH ADDLFRQLAPKYEQNREIFNRIFLNRVTLIKAEQRDGKNILTFALTASIQRASLTGNSVR HHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEEEHHHHHHHCCCCCEEE LIDPEIVEREEIMTLTRDATAGAGKGSIYQHTCPACGAPVKDTLDLKCAFCGSTLNSTAN EECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHCCCCC DWVVSGLTGR CCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA