Click here to switch to the map view.

The map label for this gene is bchB [H]

Identifier: 193211894

GI number: 193211894

Start: 220231

End: 221838

Strand: Direct

Name: bchB [H]

Synonym: Cpar_0220

Alternate gene names: 193211894

Gene position: 220231-221838 (Clockwise)

Preceding gene: 193211893

Following gene: 193211895

Centisome position: 9.62

GC content: 61.44

Gene sequence:

>1608_bases
ATGCGTTTAGCTTTCTGGCTCTATGAAGGGACCGCGCTGCACGGCGTAAGCCGGGTGACCAACAGCATGAAAGGGGTCCA
TACCGTTTATCATGCCCCGCAGGGTGACGACTACATCACGGCGACCTACACCATGCTCGAAAGGACGCCCGAGTTCCCGA
AGCTTTCCATCAGCGTTGTGCGCGGCCAGGATCTGGCTCGTGGCACCTCGCGACTGCCCGGCACGGTCGAGCAGGTCGCA
AAGCACTACAATCCCGAACTGATCGTGGTGGCTCCGAGTTGCAGCACGGCGCTGCTTCAGGAGGATTTGGGCCAGATGGC
GCGCGCGTCCGGGATTGACGAAAACAAGATCATGGTCTATGCGGTCAACCCGTTCCGCGTGGCCGAAACCGAGGCCGCCG
AAGGACTCTTCACCGAACTCGTGAAGCGCTTCGCCGCCGAACAGCCGAAAACTGAAAAGCCTTCGGTGAACCTGCTCGGC
TTCACCTCCCTCGGCTTCCACCTTCGCTCCAACCTCACCAGCCTTCGCCGGATGCTCAAGACGCTCGGCATCGAGGTGAA
CGTGGTGGCTCCGTGGGGCGCAGGCATCGACGATCTGAAGAAGCTGCCCGCTGCATGGGTCAACATCGCGCCGTTCCGTG
AGCTTGGCTGCCAGGCTGCCGGATACCTCAAGGAGAATTTTGGTATGCCCTCGATCACCGAAGCACCGCTGGGCGTCAAC
GCAACGCTGCGCTGGCTCAGGGCGATTATTGCCGAGGTGAACAAAATCGGCGCTGAAAAAGGAATGGCTCCGATCGAGAT
GCCGGAGATGCGGGACTTTTCGCTCGACGGCCAGAGCGCTCCGAGCGGCGTGCCGTGGTTCGCGCGGACGGCGGACATGG
AGAGCTTCAGCAACAAGCGCGCGTTCGTGTTTGGCGACGCCACGCAGGTTGTCGGCGTGACGAAGTTCCTCAAGGACGAA
CTCGGCATGAAGATCATCGGCGCGGGCACCTACCTGCCGAAGCAGGCGGACTGGGTGCGCGAGCAGCTCGAAGGCTACCT
GCCGGGCGAGCTGATGGTGACCGACAAATTCCAGGAGGTTTCGGCTTTCATCGAGGAGGAGATGCCGGAGCTGGTCTGCG
GTACCCAGATGGAGCGGCACAGTTGCCGCAAGCTCGACGTGCCCTGCATGGTCATTTCGACGCCGACCCATATCGAGAAC
CACCTGCTCGGCTACTACCCCTTCTTCGGTTTCGACGGCGCGGATGTGATGGCCGACAGGGTTTACACCTCGGCCAAGCT
TGGTCTGGAGAAGCACCTGATCGACTTCTTCGGCGATGCCGGTCTCGAATACGAGGAGGAGGAGCCGGAAGTGTTCACCG
AACCGGCGATGTCCGGCAATGGCACTGTGACTTCGTCCGCGGAGGCTCCGGCGGAAGCCGCGGTCGCGACCGCAACGGCA
ACCGGCGAACTGAGCTGGACTGCCGAGGCCGAGAAGATGCTCGGCAAGGTTCCGTTCTTCGTGCGCAAGAAGGTTCGCAA
GAACACCGATAACTATGCCCGCGAAATCGGGGAACAGGTTATCACGGCGGATGTATTCCGGAAGGCGAAGGAGCATCTCG
GCGGGTAA

Upstream 100 bases:

>100_bases
CTGCGCCGCGAGAGCCTGCCTGAGTTCGACGAATCGGTGTGGCTCGAAGGGGTGATGCCCAGCGCTCAGTAACTTTCAAG
ACGAAAACCAACGAACCAAC

Downstream 100 bases:

>100_bases
CGGGAAAATCTGAAAAATCAACAAACCAATTGACCTCTATCATACCATGAGTTTAGTATTGGCCGTTTACGGAAAAGGCG
GGATCGGCAAGAGCACGACC

Product: light-independent protochlorophyllide reductase subunit B

Products: NA

Alternate protein names: DPOR subunit B; LI-POR subunit B [H]

Number of amino acids: Translated: 535; Mature: 535

Protein sequence:

>535_residues
MRLAFWLYEGTALHGVSRVTNSMKGVHTVYHAPQGDDYITATYTMLERTPEFPKLSISVVRGQDLARGTSRLPGTVEQVA
KHYNPELIVVAPSCSTALLQEDLGQMARASGIDENKIMVYAVNPFRVAETEAAEGLFTELVKRFAAEQPKTEKPSVNLLG
FTSLGFHLRSNLTSLRRMLKTLGIEVNVVAPWGAGIDDLKKLPAAWVNIAPFRELGCQAAGYLKENFGMPSITEAPLGVN
ATLRWLRAIIAEVNKIGAEKGMAPIEMPEMRDFSLDGQSAPSGVPWFARTADMESFSNKRAFVFGDATQVVGVTKFLKDE
LGMKIIGAGTYLPKQADWVREQLEGYLPGELMVTDKFQEVSAFIEEEMPELVCGTQMERHSCRKLDVPCMVISTPTHIEN
HLLGYYPFFGFDGADVMADRVYTSAKLGLEKHLIDFFGDAGLEYEEEEPEVFTEPAMSGNGTVTSSAEAPAEAAVATATA
TGELSWTAEAEKMLGKVPFFVRKKVRKNTDNYAREIGEQVITADVFRKAKEHLGG

Sequences:

>Translated_535_residues
MRLAFWLYEGTALHGVSRVTNSMKGVHTVYHAPQGDDYITATYTMLERTPEFPKLSISVVRGQDLARGTSRLPGTVEQVA
KHYNPELIVVAPSCSTALLQEDLGQMARASGIDENKIMVYAVNPFRVAETEAAEGLFTELVKRFAAEQPKTEKPSVNLLG
FTSLGFHLRSNLTSLRRMLKTLGIEVNVVAPWGAGIDDLKKLPAAWVNIAPFRELGCQAAGYLKENFGMPSITEAPLGVN
ATLRWLRAIIAEVNKIGAEKGMAPIEMPEMRDFSLDGQSAPSGVPWFARTADMESFSNKRAFVFGDATQVVGVTKFLKDE
LGMKIIGAGTYLPKQADWVREQLEGYLPGELMVTDKFQEVSAFIEEEMPELVCGTQMERHSCRKLDVPCMVISTPTHIEN
HLLGYYPFFGFDGADVMADRVYTSAKLGLEKHLIDFFGDAGLEYEEEEPEVFTEPAMSGNGTVTSSAEAPAEAAVATATA
TGELSWTAEAEKMLGKVPFFVRKKVRKNTDNYAREIGEQVITADVFRKAKEHLGG
>Mature_535_residues
MRLAFWLYEGTALHGVSRVTNSMKGVHTVYHAPQGDDYITATYTMLERTPEFPKLSISVVRGQDLARGTSRLPGTVEQVA
KHYNPELIVVAPSCSTALLQEDLGQMARASGIDENKIMVYAVNPFRVAETEAAEGLFTELVKRFAAEQPKTEKPSVNLLG
FTSLGFHLRSNLTSLRRMLKTLGIEVNVVAPWGAGIDDLKKLPAAWVNIAPFRELGCQAAGYLKENFGMPSITEAPLGVN
ATLRWLRAIIAEVNKIGAEKGMAPIEMPEMRDFSLDGQSAPSGVPWFARTADMESFSNKRAFVFGDATQVVGVTKFLKDE
LGMKIIGAGTYLPKQADWVREQLEGYLPGELMVTDKFQEVSAFIEEEMPELVCGTQMERHSCRKLDVPCMVISTPTHIEN
HLLGYYPFFGFDGADVMADRVYTSAKLGLEKHLIDFFGDAGLEYEEEEPEVFTEPAMSGNGTVTSSAEAPAEAAVATATA
TGELSWTAEAEKMLGKVPFFVRKKVRKNTDNYAREIGEQVITADVFRKAKEHLGG

Specific function: Uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent [H]

COG id: COG2710

COG function: function code C; Nitrogenase molybdenum-iron protein, alpha and beta chains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ChlB/BchB/BchZ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000510
- InterPro:   IPR013580
- InterPro:   IPR005969
- InterPro:   IPR016209 [H]

Pfam domain/function: PF00148 Oxidored_nitro; PF08369 PCP_red [H]

EC number: 1.18.-.-

Molecular weight: Translated: 58857; Mature: 58857

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLAFWLYEGTALHGVSRVTNSMKGVHTVYHAPQGDDYITATYTMLERTPEFPKLSISVV
CEEEEEEECCCHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEHHHHHCCCCCCCEEEEEE
RGQDLARGTSRLPGTVEQVAKHYNPELIVVAPSCSTALLQEDLGQMARASGIDENKIMVY
CCCHHHCCCCCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEE
AVNPFRVAETEAAEGLFTELVKRFAAEQPKTEKPSVNLLGFTSLGFHLRSNLTSLRRMLK
EECCEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHH
TLGIEVNVVAPWGAGIDDLKKLPAAWVNIAPFRELGCQAAGYLKENFGMPSITEAPLGVN
HHCCEEEEEECCCCCHHHHHHCCHHHHCCCCHHHHCCHHHHHHHHHCCCCCCCCCCCCCH
ATLRWLRAIIAEVNKIGAEKGMAPIEMPEMRDFSLDGQSAPSGVPWFARTADMESFSNKR
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHCCCC
AFVFGDATQVVGVTKFLKDELGMKIIGAGTYLPKQADWVREQLEGYLPGELMVTDKFQEV
EEEEECHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHCCCCCCCEEEECCHHHH
SAFIEEEMPELVCGTQMERHSCRKLDVPCMVISTPTHIENHLLGYYPFFGFDGADVMADR
HHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEEECCCHHHHCCEEECCCCCCCCHHHHHHH
VYTSAKLGLEKHLIDFFGDAGLEYEEEEPEVFTEPAMSGNGTVTSSAEAPAEAAVATATA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCEECCCCCCHHHHHEEEEC
TGELSWTAEAEKMLGKVPFFVRKKVRKNTDNYAREIGEQVITADVFRKAKEHLGG
CCCEEEHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRLAFWLYEGTALHGVSRVTNSMKGVHTVYHAPQGDDYITATYTMLERTPEFPKLSISVV
CEEEEEEECCCHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEHHHHHCCCCCCCEEEEEE
RGQDLARGTSRLPGTVEQVAKHYNPELIVVAPSCSTALLQEDLGQMARASGIDENKIMVY
CCCHHHCCCCCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEE
AVNPFRVAETEAAEGLFTELVKRFAAEQPKTEKPSVNLLGFTSLGFHLRSNLTSLRRMLK
EECCEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHH
TLGIEVNVVAPWGAGIDDLKKLPAAWVNIAPFRELGCQAAGYLKENFGMPSITEAPLGVN
HHCCEEEEEECCCCCHHHHHHCCHHHHCCCCHHHHCCHHHHHHHHHCCCCCCCCCCCCCH
ATLRWLRAIIAEVNKIGAEKGMAPIEMPEMRDFSLDGQSAPSGVPWFARTADMESFSNKR
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHCCCC
AFVFGDATQVVGVTKFLKDELGMKIIGAGTYLPKQADWVREQLEGYLPGELMVTDKFQEV
EEEEECHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHCCCCCCCEEEECCHHHH
SAFIEEEMPELVCGTQMERHSCRKLDVPCMVISTPTHIENHLLGYYPFFGFDGADVMADR
HHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEEECCCHHHHCCEEECCCCCCCCHHHHHHH
VYTSAKLGLEKHLIDFFGDAGLEYEEEEPEVFTEPAMSGNGTVTSSAEAPAEAAVATATA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCEECCCCCCHHHHHEEEEC
TGELSWTAEAEKMLGKVPFFVRKKVRKNTDNYAREIGEQVITADVFRKAKEHLGG
CCCEEEHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10976061; 12093901 [H]