| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is chlL
Identifier: 193211895
GI number: 193211895
Start: 221885
End: 222715
Strand: Direct
Name: chlL
Synonym: Cpar_0221
Alternate gene names: 193211895
Gene position: 221885-222715 (Clockwise)
Preceding gene: 193211894
Following gene: 193211896
Centisome position: 9.69
GC content: 59.81
Gene sequence:
>831_bases ATGAGTTTAGTATTGGCCGTTTACGGAAAAGGCGGGATCGGCAAGAGCACGACCAGCGCGAACATTTCGGCAGCGCTGGC GCTCAAGGGAGCCAAGGTGCTTCAGATCGGCTGCGACCCGAAGCACGACAGTACCTTCCCGATTACCGGAAAGCTCCAGA AAACCGTCATCGAGGCTCTTGAAGAGGTCGATTTCCACCACGAGGAGCTTTCGCCTGAAGACATCGTCGAAACCGGTTTC GCGGGCATCGACGGCCTCGAAGCGGGTGGCCCGCCAGCGGGCAGTGGCTGCGGCGGTTACGTCGTCGGCGAGTCGGTCAC GCTGTTGCAGGAGATGGGGCTGTACGACAAGTACGACGTCATTCTTTTCGACGTGCTCGGTGACGTGGTGTGCGGCGGCT TCAGCGCCCCGCTGAACTACGCCGACTACGCGGTCATCATCGCCACCAACGACTTCGACAGCATCTTCGCGGCCAACCGA CTCTGCATGGCCATTCAGCAGAAGAGCGTGCGCTACAAGGTACAGCTCGCAGGCATCGTGGCCAACCGCGTGGACTACAC CAAAGGCGGCGGCACCAACATGCTCGACCAGTTCGCCGAACAGGTCGGTACGCGCCTGCTCGCCAAGGTTCCGTATCATG AGTTGATCCGCAAAAGCCGTTTTGCAGGCAAGACCCTGTTTGCAATGGACGAGAACGAGCCGGAGCTTGCCGACTGCCTC GCGCCATACAACGAGATTGCCGAGCAGATTCTCTCCAAAACGCCAATCGCCTCGGTACCGAAACCGATCGGTGACCGCGA AATCTTCGACATCGTCGGCGGCTGGCAGTAA
Upstream 100 bases:
>100_bases CAGGTTATCACGGCGGATGTATTCCGGAAGGCGAAGGAGCATCTCGGCGGGTAACGGGAAAATCTGAAAAATCAACAAAC CAATTGACCTCTATCATACC
Downstream 100 bases:
>100_bases GTACGGCTGTTCTATAGTTTTGTACCGAAGGAGCGCGAACGCGCTCCTTCGGCGTTTATAGCGGGTTTTTCAATGGGTGA AATGGGCATGGTGAATGGTC
Product: protochlorophyllide reductase iron-sulfur ATP-binding protein
Products: NA
Alternate protein names: DPOR subunit L; LI-POR subunit L
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MSLVLAVYGKGGIGKSTTSANISAALALKGAKVLQIGCDPKHDSTFPITGKLQKTVIEALEEVDFHHEELSPEDIVETGF AGIDGLEAGGPPAGSGCGGYVVGESVTLLQEMGLYDKYDVILFDVLGDVVCGGFSAPLNYADYAVIIATNDFDSIFAANR LCMAIQQKSVRYKVQLAGIVANRVDYTKGGGTNMLDQFAEQVGTRLLAKVPYHELIRKSRFAGKTLFAMDENEPELADCL APYNEIAEQILSKTPIASVPKPIGDREIFDIVGGWQ
Sequences:
>Translated_276_residues MSLVLAVYGKGGIGKSTTSANISAALALKGAKVLQIGCDPKHDSTFPITGKLQKTVIEALEEVDFHHEELSPEDIVETGF AGIDGLEAGGPPAGSGCGGYVVGESVTLLQEMGLYDKYDVILFDVLGDVVCGGFSAPLNYADYAVIIATNDFDSIFAANR LCMAIQQKSVRYKVQLAGIVANRVDYTKGGGTNMLDQFAEQVGTRLLAKVPYHELIRKSRFAGKTLFAMDENEPELADCL APYNEIAEQILSKTPIASVPKPIGDREIFDIVGGWQ >Mature_275_residues SLVLAVYGKGGIGKSTTSANISAALALKGAKVLQIGCDPKHDSTFPITGKLQKTVIEALEEVDFHHEELSPEDIVETGFA GIDGLEAGGPPAGSGCGGYVVGESVTLLQEMGLYDKYDVILFDVLGDVVCGGFSAPLNYADYAVIIATNDFDSIFAANRL CMAIQQKSVRYKVQLAGIVANRVDYTKGGGTNMLDQFAEQVGTRLLAKVPYHELIRKSRFAGKTLFAMDENEPELADCLA PYNEIAEQILSKTPIASVPKPIGDREIFDIVGGWQ
Specific function: Uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent
COG id: COG1348
COG function: function code P; Nitrogenase subunit NifH (ATPase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NifH/BchL/ChlL family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): BCHL_CHLP8 (B3QQZ4)
Other databases:
- EMBL: CP001099 - RefSeq: YP_001997848.1 - ProteinModelPortal: B3QQZ4 - GeneID: 6419129 - GenomeReviews: CP001099_GR - KEGG: cpc:Cpar_0221 - HOGENOM: HBG488165 - OMA: IPTIIDT - ProtClustDB: PRK13185 - HAMAP: MF_00355 - InterPro: IPR000392 - InterPro: IPR005971 - PIRSF: PIRSF000363 - PRINTS: PR00091 - TIGRFAMs: TIGR01281
Pfam domain/function: PF00142 Fer4_NifH
EC number: 1.18.-.-
Molecular weight: Translated: 29512; Mature: 29381
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: PS00746 NIFH_FRXC_1; PS00692 NIFH_FRXC_2; PS51026 NIFH_FRXC_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLVLAVYGKGGIGKSTTSANISAALALKGAKVLQIGCDPKHDSTFPITGKLQKTVIEAL CCEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHH EEVDFHHEELSPEDIVETGFAGIDGLEAGGPPAGSGCGGYVVGESVTLLQEMGLYDKYDV HHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHCCCCCCHHH ILFDVLGDVVCGGFSAPLNYADYAVIIATNDFDSIFAANRLCMAIQQKSVRYKVQLAGIV HHHHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEEEHHH ANRVDYTKGGGTNMLDQFAEQVGTRLLAKVPYHELIRKSRFAGKTLFAMDENEPELADCL HHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCHHHHHH APYNEIAEQILSKTPIASVPKPIGDREIFDIVGGWQ CCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCC >Mature Secondary Structure SLVLAVYGKGGIGKSTTSANISAALALKGAKVLQIGCDPKHDSTFPITGKLQKTVIEAL CEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHH EEVDFHHEELSPEDIVETGFAGIDGLEAGGPPAGSGCGGYVVGESVTLLQEMGLYDKYDV HHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHCCCCCCHHH ILFDVLGDVVCGGFSAPLNYADYAVIIATNDFDSIFAANRLCMAIQQKSVRYKVQLAGIV HHHHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEEEHHH ANRVDYTKGGGTNMLDQFAEQVGTRLLAKVPYHELIRKSRFAGKTLFAMDENEPELADCL HHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCHHHHHH APYNEIAEQILSKTPIASVPKPIGDREIFDIVGGWQ CCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA