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The map label for this gene is fadF [H]

Identifier: 193211775

GI number: 193211775

Start: 120480

End: 122468

Strand: Direct

Name: fadF [H]

Synonym: Cpar_0100

Alternate gene names: 193211775

Gene position: 120480-122468 (Clockwise)

Preceding gene: 193211774

Following gene: 193211776

Centisome position: 5.26

GC content: 59.63

Gene sequence:

>1989_bases
ATGGAAGCAACCAGAGAAATCTACTGGAATATCGATCACGGGACGGTTGCTCTCATGTACCTGATGGCGTTGGCGGCTGT
TGCCGTGATGGTTTATGGATTCAGGGAGCGGATCGCCCTCTGGCAAAAAGGAAAGTCGCTGGATCGCTTTGATCATCTTC
AGCAGCGTTTGGCACACTTCATTACCGACGCCCTGAGCCAGCGAAAGGTGCTGAACGTGATGCAGGGTGGGTTGCCTCAT
GCGTTGCTGTTCTGGGGCTTTCTGCTGCTCTTCATCGGCACCGTGCTGGTGATGCTGCAGGCCGACCTGCTGGCTCCTCT
TTTCAGCGTGAACCTGCTCTCCGGCGACTTCTACCGGCTCTATTCGTTTGTGCTCGACCTTGCCGGGCTTGCGGCCATGC
TGGCGCTCGCAGCGCTGGCTGTTCGGCGATTCATCATCAAGCCTGCCGGGCTGGAAACTTCTTCTGCTGATGTTGCCATT
CACCTGCTGCTGTTCGCTATCCTTTTTTCCGGCTTTCTGATCGAAGGCGCCCGGATGGCCGTCACCGAAGTGCGTGACAA
TCCGGCGCTGGCGGCATGGTCGCCGGTCGGTGCGGTGTTCGCCCGTCCGTTTCTCGGTATGGATGAGCACCTTGTCAGAG
GGGCGCATAAAGGCTTCTGGCTGCTTCATCTGCTGTTCGGACTTGGCTTCCTGGCCGTCATTCCCCGCACGAAGCTGCGC
CACCTTGCCACCACGAGCGGTGGTAGCTTGCTCGAACCGCATGAGCCGACGGGGACCTATTCCGCGATCGATCTGGAAGA
TGAGCATATCGAGCAGTTCGGTGCATCGGTGGTCAGCGATCTCAGCTGGAAAGATCTGTTCGATACCGATGCCTGCATGC
AGTGTGGCCGCTGCCAGCAGCGTTGCCCGGCCCACCTGACCGGCAAGCCGCTTTCGCCGATGAAGGTGATTACGGACATC
GGCGAGCTGGCCGGCAACGAAAACGGCAAAGGGCTGGTAGAAAAAGTCTCTCGCGATGCTCTCTGGTCGTGCACGACCTG
CCGCGCTTGCGAGCAGATTTGTCCGGCAAGCATCGAGCATATCGGCAAGATCATCGAAATGCGGCGCAGCCTTGCGCTCA
TGGAGGGCGAGTTCCCCGGCGACGAAGCCCGTCGAGCCTGCGAGGCGATCGAGGTGAACGGCAATCCCTTCGGCCTCTCC
GCCACGTCGCGGGGTGACTGGGCCAAAGGCCTACCAGTGAGTATCATCAAAGGGAAGTGCGATGCGGATATTCTCTATTT
CACCGGCTGCTACGCTTCGCACGACCCGCGCAATCGCAAGGTGGCTGAAAGCTTTGTACGAATCTGCGAGGCGGCGGGTG
TGACGGTGGCTATTCTCGGTGGTGCGGAGCGCTGCTGCGGCGAGCCAGCGAGGAAGCTTGGCAACGAGTACCTCTACCGG
ATGGTGGCCGACAGCAACATCGAGGCCATCCGGGCATCCGGAGCGCGGCGCATCGTGACCGCCTGCCCGCACTGCTTCAA
CACCCTCGCGCGGGATTACCGTGAACTCGGCCTCGATCTGCCGGTTGAGCACCACTCGACTTTCATTGCGCGATTGATCA
ATGACGGAAAGCTCAAGCTGAAGCCTGAGCGCTTTACGGCGACTTTCCACGATTCCTGCTATCTTGCCCGTTATCAGGAG
ATTGCCGAAGAGCCGCGTGAGGTTGTTCGTGCTGCCGGTATCAAGCTCGTCGAGATGGCAGCATTCGGCAAGAATGGCTT
CTGCTGCGGGGCTGGCGGCGGGCGCATTCTCGCCGAAGAGAAGCTCGGCACGCCGATTGTCGATGAGCGGTTGCGGCAGG
CACGTCAAACTGGCGCCAAGAGCCTCGTTTCGGCCTGTCCGTTCTGCCTGAGCATGTTCGAAGATGGTCTCAAACGCGCG
GATAGCCGTGAACCAATCAAGGCATACGATCTTGCCGAAATCGTCGCGCGCAGCATCGATCGAAAATGA

Upstream 100 bases:

>100_bases
GCGGGACGTTCCGGTTTCCGCCCTTAACTTTTATATTGGCGATTCAGGGATGGGCTTGCTCATCCGGATTGTTCAACCCC
ATCAAGCTATTCCTGACTGA

Downstream 100 bases:

>100_bases
GGGATCAGCTGTTTTTCCAACGTTAAAATGAGACGCATGTTGGTTACTCGCACCGAAATCAAAGAACGCACCACGCGCCT
GCAAGCGCGTCTTGCAGCGG

Product: hypothetical protein

Products: FADH2; dihydroxy-acetone-phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 662; Mature: 662

Protein sequence:

>662_residues
MEATREIYWNIDHGTVALMYLMALAAVAVMVYGFRERIALWQKGKSLDRFDHLQQRLAHFITDALSQRKVLNVMQGGLPH
ALLFWGFLLLFIGTVLVMLQADLLAPLFSVNLLSGDFYRLYSFVLDLAGLAAMLALAALAVRRFIIKPAGLETSSADVAI
HLLLFAILFSGFLIEGARMAVTEVRDNPALAAWSPVGAVFARPFLGMDEHLVRGAHKGFWLLHLLFGLGFLAVIPRTKLR
HLATTSGGSLLEPHEPTGTYSAIDLEDEHIEQFGASVVSDLSWKDLFDTDACMQCGRCQQRCPAHLTGKPLSPMKVITDI
GELAGNENGKGLVEKVSRDALWSCTTCRACEQICPASIEHIGKIIEMRRSLALMEGEFPGDEARRACEAIEVNGNPFGLS
ATSRGDWAKGLPVSIIKGKCDADILYFTGCYASHDPRNRKVAESFVRICEAAGVTVAILGGAERCCGEPARKLGNEYLYR
MVADSNIEAIRASGARRIVTACPHCFNTLARDYRELGLDLPVEHHSTFIARLINDGKLKLKPERFTATFHDSCYLARYQE
IAEEPREVVRAAGIKLVEMAAFGKNGFCCGAGGGRILAEEKLGTPIVDERLRQARQTGAKSLVSACPFCLSMFEDGLKRA
DSREPIKAYDLAEIVARSIDRK

Sequences:

>Translated_662_residues
MEATREIYWNIDHGTVALMYLMALAAVAVMVYGFRERIALWQKGKSLDRFDHLQQRLAHFITDALSQRKVLNVMQGGLPH
ALLFWGFLLLFIGTVLVMLQADLLAPLFSVNLLSGDFYRLYSFVLDLAGLAAMLALAALAVRRFIIKPAGLETSSADVAI
HLLLFAILFSGFLIEGARMAVTEVRDNPALAAWSPVGAVFARPFLGMDEHLVRGAHKGFWLLHLLFGLGFLAVIPRTKLR
HLATTSGGSLLEPHEPTGTYSAIDLEDEHIEQFGASVVSDLSWKDLFDTDACMQCGRCQQRCPAHLTGKPLSPMKVITDI
GELAGNENGKGLVEKVSRDALWSCTTCRACEQICPASIEHIGKIIEMRRSLALMEGEFPGDEARRACEAIEVNGNPFGLS
ATSRGDWAKGLPVSIIKGKCDADILYFTGCYASHDPRNRKVAESFVRICEAAGVTVAILGGAERCCGEPARKLGNEYLYR
MVADSNIEAIRASGARRIVTACPHCFNTLARDYRELGLDLPVEHHSTFIARLINDGKLKLKPERFTATFHDSCYLARYQE
IAEEPREVVRAAGIKLVEMAAFGKNGFCCGAGGGRILAEEKLGTPIVDERLRQARQTGAKSLVSACPFCLSMFEDGLKRA
DSREPIKAYDLAEIVARSIDRK
>Mature_662_residues
MEATREIYWNIDHGTVALMYLMALAAVAVMVYGFRERIALWQKGKSLDRFDHLQQRLAHFITDALSQRKVLNVMQGGLPH
ALLFWGFLLLFIGTVLVMLQADLLAPLFSVNLLSGDFYRLYSFVLDLAGLAAMLALAALAVRRFIIKPAGLETSSADVAI
HLLLFAILFSGFLIEGARMAVTEVRDNPALAAWSPVGAVFARPFLGMDEHLVRGAHKGFWLLHLLFGLGFLAVIPRTKLR
HLATTSGGSLLEPHEPTGTYSAIDLEDEHIEQFGASVVSDLSWKDLFDTDACMQCGRCQQRCPAHLTGKPLSPMKVITDI
GELAGNENGKGLVEKVSRDALWSCTTCRACEQICPASIEHIGKIIEMRRSLALMEGEFPGDEARRACEAIEVNGNPFGLS
ATSRGDWAKGLPVSIIKGKCDADILYFTGCYASHDPRNRKVAESFVRICEAAGVTVAILGGAERCCGEPARKLGNEYLYR
MVADSNIEAIRASGARRIVTACPHCFNTLARDYRELGLDLPVEHHSTFIARLINDGKLKLKPERFTATFHDSCYLARYQE
IAEEPREVVRAAGIKLVEMAAFGKNGFCCGAGGGRILAEEKLGTPIVDERLRQARQTGAKSLVSACPFCLSMFEDGLKRA
DSREPIKAYDLAEIVARSIDRK

Specific function: Electron Transfer Protein; May Also Function As The Membrane Anchor For The Glpab Dimer. [C]

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 72754; Mature: 72754

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEATREIYWNIDHGTVALMYLMALAAVAVMVYGFRERIALWQKGKSLDRFDHLQQRLAHF
CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
ITDALSQRKVLNVMQGGLPHALLFWGFLLLFIGTVLVMLQADLLAPLFSVNLLSGDFYRL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
YSFVLDLAGLAAMLALAALAVRRFIIKPAGLETSSADVAIHLLLFAILFSGFLIEGARMA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHH
VTEVRDNPALAAWSPVGAVFARPFLGMDEHLVRGAHKGFWLLHLLFGLGFLAVIPRTKLR
HHHHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHH
HLATTSGGSLLEPHEPTGTYSAIDLEDEHIEQFGASVVSDLSWKDLFDTDACMQCGRCQQ
HHHCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHH
RCPAHLTGKPLSPMKVITDIGELAGNENGKGLVEKVSRDALWSCTTCRACEQICPASIEH
HCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCHHHHH
IGKIIEMRRSLALMEGEFPGDEARRACEAIEVNGNPFGLSATSRGDWAKGLPVSIIKGKC
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEECCCEECCCCCCCCCCCCCCCHHEECCCC
DADILYFTGCYASHDPRNRKVAESFVRICEAAGVTVAILGGAERCCGEPARKLGNEYLYR
CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHCCCHHHHHHHHHHHH
MVADSNIEAIRASGARRIVTACPHCFNTLARDYRELGLDLPVEHHSTFIARLINDGKLKL
HHHCCCHHHHHHCCCHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEE
KPERFTATFHDSCYLARYQEIAEEPREVVRAAGIKLVEMAAFGKNGFCCGAGGGRILAEE
CHHHHEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEECCCCCCEEEHH
KLGTPIVDERLRQARQTGAKSLVSACPFCLSMFEDGLKRADSREPIKAYDLAEIVARSID
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHC
RK
CC
>Mature Secondary Structure
MEATREIYWNIDHGTVALMYLMALAAVAVMVYGFRERIALWQKGKSLDRFDHLQQRLAHF
CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
ITDALSQRKVLNVMQGGLPHALLFWGFLLLFIGTVLVMLQADLLAPLFSVNLLSGDFYRL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
YSFVLDLAGLAAMLALAALAVRRFIIKPAGLETSSADVAIHLLLFAILFSGFLIEGARMA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHH
VTEVRDNPALAAWSPVGAVFARPFLGMDEHLVRGAHKGFWLLHLLFGLGFLAVIPRTKLR
HHHHCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHH
HLATTSGGSLLEPHEPTGTYSAIDLEDEHIEQFGASVVSDLSWKDLFDTDACMQCGRCQQ
HHHCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHH
RCPAHLTGKPLSPMKVITDIGELAGNENGKGLVEKVSRDALWSCTTCRACEQICPASIEH
HCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCHHHHH
IGKIIEMRRSLALMEGEFPGDEARRACEAIEVNGNPFGLSATSRGDWAKGLPVSIIKGKC
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEECCCEECCCCCCCCCCCCCCCHHEECCCC
DADILYFTGCYASHDPRNRKVAESFVRICEAAGVTVAILGGAERCCGEPARKLGNEYLYR
CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHCCCHHHHHHHHHHHH
MVADSNIEAIRASGARRIVTACPHCFNTLARDYRELGLDLPVEHHSTFIARLINDGKLKL
HHHCCCHHHHHHCCCHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEE
KPERFTATFHDSCYLARYQEIAEEPREVVRAAGIKLVEMAAFGKNGFCCGAGGGRILAEE
CHHHHEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEECCCCCCEEEHH
KLGTPIVDERLRQARQTGAKSLVSACPFCLSMFEDGLKRADSREPIKAYDLAEIVARSID
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHC
RK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: FAD; glycerol-3-phosphate [C]

Specific reaction: FAD + glycerol-3-phosphate = FADH2 + dihydroxy-acetone-phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]