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The map label for this gene is glnB [H]

Identifier: 193211764

GI number: 193211764

Start: 102705

End: 103046

Strand: Direct

Name: glnB [H]

Synonym: Cpar_0089

Alternate gene names: 193211764

Gene position: 102705-103046 (Clockwise)

Preceding gene: 193211763

Following gene: 193211766

Centisome position: 4.49

GC content: 54.97

Gene sequence:

>342_bases
ATGAAACTTATTACCGCTATCATTCCTCCGGACAGGCTTGACCACGTTCGCGAAGCGCTGATACAGGCCGATATTACCAG
AATTACGGTCAGCCGCGTGAGCGGCCACGGCCGCCAGGAGGATATCGAGTATTATCGTGGCCAGAAAATCGCTCCGAACC
TTATTCCGAAGGTGCGTCTGGATATCGCCGTCAACGATCAATATGTCGATACCACCATCGATACCATCATCGAAGCCGCG
CGGCATGCCGCTGGCAAAATCGGCGACGGCAAGATTTTCGTTACGCCGCTGGAGCAGTGCATCAGGATCAGGACTGACGA
GCGCGGAGGAAGCGCTATCTGA

Upstream 100 bases:

>100_bases
GTTTGCGTATCGGCGAAAGCGATGAAATGTCCGGCCTTGACCACAGCATGCACGGTGAGCAGGGATACGGCCTTATCAAT
CCTAACTGATAGAAAACAGT

Downstream 100 bases:

>100_bases
GCCTTGATTCAGCACGGTTCGTGCACCGATTATCTAATGAAAGCAGAAGCCGCCGGGAGACAGACGTTCTCCGGCGGCTT
CTGCTTTTCAGCTCAAATGC

Product: nitrogen regulatory protein P-II

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MKLITAIIPPDRLDHVREALIQADITRITVSRVSGHGRQEDIEYYRGQKIAPNLIPKVRLDIAVNDQYVDTTIDTIIEAA
RHAAGKIGDGKIFVTPLEQCIRIRTDERGGSAI

Sequences:

>Translated_113_residues
MKLITAIIPPDRLDHVREALIQADITRITVSRVSGHGRQEDIEYYRGQKIAPNLIPKVRLDIAVNDQYVDTTIDTIIEAA
RHAAGKIGDGKIFVTPLEQCIRIRTDERGGSAI
>Mature_113_residues
MKLITAIIPPDRLDHVREALIQADITRITVSRVSGHGRQEDIEYYRGQKIAPNLIPKVRLDIAVNDQYVDTTIDTIIEAA
RHAAGKIGDGKIFVTPLEQCIRIRTDERGGSAI

Specific function: In nitrogen-limiting conditions, when the ratio of Gln to 2-ketoglutarate decreases, P-II is uridylylated to P-II-UMP. P- II-UMP allows the deadenylation of glutamine synthetase (GS), thus activating the enzyme. Conversely, in nitrogen excess P-II is deur

COG id: COG0347

COG function: function code E; Nitrogen regulatory protein PII

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the P(II) protein family [H]

Homologues:

Organism=Escherichia coli, GI1788904, Length=114, Percent_Identity=51.7543859649123, Blast_Score=100, Evalue=3e-23,
Organism=Escherichia coli, GI1786655, Length=114, Percent_Identity=48.2456140350877, Blast_Score=100, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002187
- InterPro:   IPR011322
- InterPro:   IPR015867
- InterPro:   IPR017918
- InterPro:   IPR002332 [H]

Pfam domain/function: PF00543 P-II [H]

EC number: NA

Molecular weight: Translated: 12587; Mature: 12587

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLITAIIPPDRLDHVREALIQADITRITVSRVSGHGRQEDIEYYRGQKIAPNLIPKVRL
CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCEEEE
DIAVNDQYVDTTIDTIIEAARHAAGKIGDGKIFVTPLEQCIRIRTDERGGSAI
EEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKLITAIIPPDRLDHVREALIQADITRITVSRVSGHGRQEDIEYYRGQKIAPNLIPKVRL
CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCEEEE
DIAVNDQYVDTTIDTIIEAARHAAGKIGDGKIFVTPLEQCIRIRTDERGGSAI
EEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]