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The map label for this gene is 193211757

Identifier: 193211757

GI number: 193211757

Start: 95072

End: 95386

Strand: Direct

Name: 193211757

Synonym: Cpar_0082

Alternate gene names: NA

Gene position: 95072-95386 (Clockwise)

Preceding gene: 193211756

Following gene: 193211758

Centisome position: 4.15

GC content: 36.51

Gene sequence:

>315_bases
ATGGATAAGACAACAAAATCTAAAGAAACTGCCATTATCGAGCTGGAAACGCTCACCCCTCTCTTCATTAAAGGCAAAGA
CCCCGACTATGGCGAGGGAATGTATTTTTTCCCAAATGAAAACAAAGCCTATCTCCTCGATAACGATAAGTTGTGTAAAT
TTATTTATGATAAAACGTATGATAAAGATGGTAATATCTTAGTGGATGGAAAAGATTATGTTGCATTGTATAGTGAATTA
TTGGCGAATGAAGGTGGCGAAAAAGAGATTGCTGGTTTGTATGATAAATTTTCTCGGTTCCAGGCTCAAAGATAG

Upstream 100 bases:

>100_bases
CCCGCCTCCACAAAAACACCTGATTGGACAGGCCAACATCCGGTTTATCGTTACGGATATGCGTTCTCAGTACCAATCAA
GATCACCTTCGAGGATTGAG

Downstream 100 bases:

>100_bases
ATTCTAGTTTAGACGATATTCCTAAGCAAGATAAAGAACGTTTGAAGGGTAAGTCTATTCAGTATTTTCTTGACAATCTT
GACTTGTTAGAAAAAAATAA

Product: Csm5 family CRISPR-associated RAMP protein

Products: NA

Alternate protein names: CRISPR-Associated RAMP Csm5 Family Protein

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MDKTTKSKETAIIELETLTPLFIKGKDPDYGEGMYFFPNENKAYLLDNDKLCKFIYDKTYDKDGNILVDGKDYVALYSEL
LANEGGEKEIAGLYDKFSRFQAQR

Sequences:

>Translated_104_residues
MDKTTKSKETAIIELETLTPLFIKGKDPDYGEGMYFFPNENKAYLLDNDKLCKFIYDKTYDKDGNILVDGKDYVALYSEL
LANEGGEKEIAGLYDKFSRFQAQR
>Mature_104_residues
MDKTTKSKETAIIELETLTPLFIKGKDPDYGEGMYFFPNENKAYLLDNDKLCKFIYDKTYDKDGNILVDGKDYVALYSEL
LANEGGEKEIAGLYDKFSRFQAQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11970; Mature: 11970

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKTTKSKETAIIELETLTPLFIKGKDPDYGEGMYFFPNENKAYLLDNDKLCKFIYDKTY
CCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCEEEEECCCEEEEECCCCEEEEECCCCC
DKDGNILVDGKDYVALYSELLANEGGEKEIAGLYDKFSRFQAQR
CCCCCEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDKTTKSKETAIIELETLTPLFIKGKDPDYGEGMYFFPNENKAYLLDNDKLCKFIYDKTY
CCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCEEEEECCCEEEEECCCCEEEEECCCCC
DKDGNILVDGKDYVALYSELLANEGGEKEIAGLYDKFSRFQAQR
CCCCCEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA