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The map label for this gene is 193211758

Identifier: 193211758

GI number: 193211758

Start: 95428

End: 96921

Strand: Direct

Name: 193211758

Synonym: Cpar_0083

Alternate gene names: NA

Gene position: 95428-96921 (Clockwise)

Preceding gene: 193211757

Following gene: 193211759

Centisome position: 4.17

GC content: 41.57

Gene sequence:

>1494_bases
TTGAAGGGTAAGTCTATTCAGTATTTTCTTGACAATCTTGACTTGTTAGAAAAAAATAAAAAATCCGAGATCGAGCGTCT
TTCCAGGGGGGTTACTACACTCCACTTATCAAACAAGAACAAAAAGTTTATTCAGAATGGATGTGGTGAGCGTTTCCTGC
CAGGCAGCTCCATCAAAGGAGCAATAAGAAATGCACTTTTATGGAAAATGCTCAATGCTGATATGGGATTAAAACTCAAA
TTCTCAAAATTTGCTTACGATAAGTTTCAATGGTGTGAGGAGTGGACTCAAGCCAAAGTATTAGAATATATAAATGGCCT
ATCAGGGCTATCCCCTCAAAAACAAGAGGAGGAAAAAGAAAGATATAAGAAAAAGAAGCCGAGAGAGTTTGCTTCCCGCT
TTTCTCGAAAAGATGACGACGCACCAACTTCCTTGGCACAGGCATCGCTCGATTCTATAACCTTGGCAGCTTTCTCTCCA
GAGTTTGCAGGCAATAAAGCATTAGTCACGCCAAAGTATATCAAGGAATATAATGAGCAGTGGGGAAAAGCAACCGACAT
TCATCGAGATCTTTCCCGTATCATCAGAATTACGGATGCTAACTTTATCGAAAGAGCTAAATGGAAAAAAATCGATATAG
CAACATACAATTTAAGGGGTGAAAGGTTTCAGAAAAGAGATAATACATTTGCCAAACTTGAGGCTACTGATAAAACAACA
AAAGCTTGGTTCAGAATTACTCTTGATCACGATCTTGCGAGAGAATTTTTTGGAAATAGCATTCCGACATATCTCCAATC
AATTGAAAATATCTTGAAAACAGTGAGCGAGTTCTTTTATGCGGTAGCGAGAGAGGAACTCGACTTTTATGGAAAAGCAA
CTCACGTTGGTCCTGTGCATGCTGTGAAAAAGTGGTACGAAGAGTTACTGCGTTCTGCGGAGCTTGAGGGACAAGAGGGG
GCTCAGCTGTTTCGTCTGGGTTGGGGCGGTGGGATGATGACGAAAACCCAATTTCTCCATCTCGATGAGAAAGACAGAAA
ACGATCCAGAGACTTGATGAACCCTCGTGATGAAACGGTTGCACCACAATCGAGATGCTTGCAGACCGAAAAGGTAAATG
GGAATAACAACAGAAATCAAGAGGATAAAGCTCTTCACCCATTAGGCTGGTGCACGCTCCGTTATCTCGGAAGCAACATA
GCTAAAGCTAAAGATGCGTCGGCCAACGCTGAAGCCAAACGGCAAGCAACAGAACCTGCACCACCCGGTTGCGTTCGTGC
AACTATAATGGATGACGAAAGTTTTCCAATTAAGATCAAAATTGAAGAAGGTGAGTATCAGAACTCTAACACCAATCTGA
AAATCATGGAGCTTCAGGATCTCCAGAACACTCAATTCAAAAAAGGTGTGGTTGTGTTTGTGCAACTTAATGAACAACAA
GGGAAAAAAGGCAAGAAATCACTTAGGAATGCAACCTACAGAGGCAAACCATGA

Upstream 100 bases:

>100_bases
GCGAAAAAGAGATTGCTGGTTTGTATGATAAATTTTCTCGGTTCCAGGCTCAAAGATAGATTCTAGTTTAGACGATATTC
CTAAGCAAGATAAAGAACGT

Downstream 100 bases:

>100_bases
TTGACGCTATATATATCAATAGGCGAGTTGAAAAGCTTTCAAAAAACGAACCTGAAAAGGTTCAATGGCGGAACTTACTT
AGAAACCTTAGCGATGACCA

Product: Csm5 family CRISPR-associated RAMP protein

Products: NA

Alternate protein names: CRISPR-Associated RAMP Csm5 Family Protein

Number of amino acids: Translated: 497; Mature: 497

Protein sequence:

>497_residues
MKGKSIQYFLDNLDLLEKNKKSEIERLSRGVTTLHLSNKNKKFIQNGCGERFLPGSSIKGAIRNALLWKMLNADMGLKLK
FSKFAYDKFQWCEEWTQAKVLEYINGLSGLSPQKQEEEKERYKKKKPREFASRFSRKDDDAPTSLAQASLDSITLAAFSP
EFAGNKALVTPKYIKEYNEQWGKATDIHRDLSRIIRITDANFIERAKWKKIDIATYNLRGERFQKRDNTFAKLEATDKTT
KAWFRITLDHDLAREFFGNSIPTYLQSIENILKTVSEFFYAVAREELDFYGKATHVGPVHAVKKWYEELLRSAELEGQEG
AQLFRLGWGGGMMTKTQFLHLDEKDRKRSRDLMNPRDETVAPQSRCLQTEKVNGNNNRNQEDKALHPLGWCTLRYLGSNI
AKAKDASANAEAKRQATEPAPPGCVRATIMDDESFPIKIKIEEGEYQNSNTNLKIMELQDLQNTQFKKGVVVFVQLNEQQ
GKKGKKSLRNATYRGKP

Sequences:

>Translated_497_residues
MKGKSIQYFLDNLDLLEKNKKSEIERLSRGVTTLHLSNKNKKFIQNGCGERFLPGSSIKGAIRNALLWKMLNADMGLKLK
FSKFAYDKFQWCEEWTQAKVLEYINGLSGLSPQKQEEEKERYKKKKPREFASRFSRKDDDAPTSLAQASLDSITLAAFSP
EFAGNKALVTPKYIKEYNEQWGKATDIHRDLSRIIRITDANFIERAKWKKIDIATYNLRGERFQKRDNTFAKLEATDKTT
KAWFRITLDHDLAREFFGNSIPTYLQSIENILKTVSEFFYAVAREELDFYGKATHVGPVHAVKKWYEELLRSAELEGQEG
AQLFRLGWGGGMMTKTQFLHLDEKDRKRSRDLMNPRDETVAPQSRCLQTEKVNGNNNRNQEDKALHPLGWCTLRYLGSNI
AKAKDASANAEAKRQATEPAPPGCVRATIMDDESFPIKIKIEEGEYQNSNTNLKIMELQDLQNTQFKKGVVVFVQLNEQQ
GKKGKKSLRNATYRGKP
>Mature_497_residues
MKGKSIQYFLDNLDLLEKNKKSEIERLSRGVTTLHLSNKNKKFIQNGCGERFLPGSSIKGAIRNALLWKMLNADMGLKLK
FSKFAYDKFQWCEEWTQAKVLEYINGLSGLSPQKQEEEKERYKKKKPREFASRFSRKDDDAPTSLAQASLDSITLAAFSP
EFAGNKALVTPKYIKEYNEQWGKATDIHRDLSRIIRITDANFIERAKWKKIDIATYNLRGERFQKRDNTFAKLEATDKTT
KAWFRITLDHDLAREFFGNSIPTYLQSIENILKTVSEFFYAVAREELDFYGKATHVGPVHAVKKWYEELLRSAELEGQEG
AQLFRLGWGGGMMTKTQFLHLDEKDRKRSRDLMNPRDETVAPQSRCLQTEKVNGNNNRNQEDKALHPLGWCTLRYLGSNI
AKAKDASANAEAKRQATEPAPPGCVRATIMDDESFPIKIKIEEGEYQNSNTNLKIMELQDLQNTQFKKGVVVFVQLNEQQ
GKKGKKSLRNATYRGKP

Specific function: Unknown

COG id: COG1332

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57109; Mature: 57109

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGKSIQYFLDNLDLLEKNKKSEIERLSRGVTTLHLSNKNKKFIQNGCGERFLPGSSIKG
CCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCCHHHHHCCCCCCCCCCCCHHH
AIRNALLWKMLNADMGLKLKFSKFAYDKFQWCEEWTQAKVLEYINGLSGLSPQKQEEEKE
HHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
RYKKKKPREFASRFSRKDDDAPTSLAQASLDSITLAAFSPEFAGNKALVTPKYIKEYNEQ
HHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHEEEEEECCCCCCCCEEECHHHHHHHHHH
WGKATDIHRDLSRIIRITDANFIERAKWKKIDIATYNLRGERFQKRDNTFAKLEATDKTT
HCCHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEEEECCCHHHHHCCCCEEEEECCCCCC
KAWFRITLDHDLAREFFGNSIPTYLQSIENILKTVSEFFYAVAREELDFYGKATHVGPVH
EEEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
AVKKWYEELLRSAELEGQEGAQLFRLGWGGGMMTKTQFLHLDEKDRKRSRDLMNPRDETV
HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHEEECCHHHHHHHHHHCCCCCCCC
APQSRCLQTEKVNGNNNRNQEDKALHPLGWCTLRYLGSNIAKAKDASANAEAKRQATEPA
CCHHHHCCHHCCCCCCCCCCHHHCCCCHHHHHHHHHHCHHHHCCCCCCCCHHHHHCCCCC
PPGCVRATIMDDESFPIKIKIEEGEYQNSNTNLKIMELQDLQNTQFKKGVVVFVQLNEQQ
CCCCEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCC
GKKGKKSLRNATYRGKP
CCHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKGKSIQYFLDNLDLLEKNKKSEIERLSRGVTTLHLSNKNKKFIQNGCGERFLPGSSIKG
CCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCCHHHHHCCCCCCCCCCCCHHH
AIRNALLWKMLNADMGLKLKFSKFAYDKFQWCEEWTQAKVLEYINGLSGLSPQKQEEEKE
HHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
RYKKKKPREFASRFSRKDDDAPTSLAQASLDSITLAAFSPEFAGNKALVTPKYIKEYNEQ
HHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHEEEEEECCCCCCCCEEECHHHHHHHHHH
WGKATDIHRDLSRIIRITDANFIERAKWKKIDIATYNLRGERFQKRDNTFAKLEATDKTT
HCCHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEEEECCCHHHHHCCCCEEEEECCCCCC
KAWFRITLDHDLAREFFGNSIPTYLQSIENILKTVSEFFYAVAREELDFYGKATHVGPVH
EEEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
AVKKWYEELLRSAELEGQEGAQLFRLGWGGGMMTKTQFLHLDEKDRKRSRDLMNPRDETV
HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHEEECCHHHHHHHHHHCCCCCCCC
APQSRCLQTEKVNGNNNRNQEDKALHPLGWCTLRYLGSNIAKAKDASANAEAKRQATEPA
CCHHHHCCHHCCCCCCCCCCHHHCCCCHHHHHHHHHHCHHHHCCCCCCCCHHHHHCCCCC
PPGCVRATIMDDESFPIKIKIEEGEYQNSNTNLKIMELQDLQNTQFKKGVVVFVQLNEQQ
CCCCEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCC
GKKGKKSLRNATYRGKP
CCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA