| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
Click here to switch to the map view.
The map label for this gene is 193211707
Identifier: 193211707
GI number: 193211707
Start: 38241
End: 38681
Strand: Direct
Name: 193211707
Synonym: Cpar_0032
Alternate gene names: NA
Gene position: 38241-38681 (Clockwise)
Preceding gene: 193211706
Following gene: 193211708
Centisome position: 1.67
GC content: 58.73
Gene sequence:
>441_bases ATGACCAGAGCGTGGGAACAGAAAGTTAACGAAAACCGGGAGGTCGTGCTCGATCGGTGGGTGTCGTCCATCGTGGCGAT GCTGCCCGGATCGAAGAGCGGTGGTTCGCTTGTTGCTTCGGCCATTGCGGCCGAGCTTGGCGGGCTGCTGGATGCCGTCA CCGATCACTCCGCTTCGGCGGCAGAATCGATCGTGCGCATCACCCGTATCCTTGCCGTGCAGGAGATTCCTCCATCGAAA GCCCTTTCGATTCTTTTCCAGCTTCGTGGATTGATCGAAGCGTTGCCGGTCGAATGCGATCACCCGTGCCGCGACCGCCT CGAAGAGCTGACGCTGCAAGCGTTCGACAGCTACATGAAGCATCGCGAAACCATCTATCAGCTCAAATTCGATGAGGGCC GTCGCAAAATGCACATGGCGCTCAGGAGGGCCGAGGCATGA
Upstream 100 bases:
>100_bases CATGACAGTTTTTCATGCTGTCTTGAGAACGACGCTCTACCGCCGGTCCACAAAGTCCGGCGGTTTGCGGCTCTGCTAAA ACTCTTTATTCAGCACTCTT
Downstream 100 bases:
>100_bases GAAAAGTGCTGCAACCGCTGCTGCTGGTGCTCGTGCTCGCCCTGATTCCGTATGTCGGCGTCACCTACGGCAAGCTCGAC TACCTGTTCGGTATCATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MTRAWEQKVNENREVVLDRWVSSIVAMLPGSKSGGSLVASAIAAELGGLLDAVTDHSASAAESIVRITRILAVQEIPPSK ALSILFQLRGLIEALPVECDHPCRDRLEELTLQAFDSYMKHRETIYQLKFDEGRRKMHMALRRAEA
Sequences:
>Translated_146_residues MTRAWEQKVNENREVVLDRWVSSIVAMLPGSKSGGSLVASAIAAELGGLLDAVTDHSASAAESIVRITRILAVQEIPPSK ALSILFQLRGLIEALPVECDHPCRDRLEELTLQAFDSYMKHRETIYQLKFDEGRRKMHMALRRAEA >Mature_145_residues TRAWEQKVNENREVVLDRWVSSIVAMLPGSKSGGSLVASAIAAELGGLLDAVTDHSASAAESIVRITRILAVQEIPPSKA LSILFQLRGLIEALPVECDHPCRDRLEELTLQAFDSYMKHRETIYQLKFDEGRRKMHMALRRAEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16299; Mature: 16168
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRAWEQKVNENREVVLDRWVSSIVAMLPGSKSGGSLVASAIAAELGGLLDAVTDHSASA CCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH AESIVRITRILAVQEIPPSKALSILFQLRGLIEALPVECDHPCRDRLEELTLQAFDSYMK HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH HRETIYQLKFDEGRRKMHMALRRAEA HHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TRAWEQKVNENREVVLDRWVSSIVAMLPGSKSGGSLVASAIAAELGGLLDAVTDHSASA CCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH AESIVRITRILAVQEIPPSKALSILFQLRGLIEALPVECDHPCRDRLEELTLQAFDSYMK HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH HRETIYQLKFDEGRRKMHMALRRAEA HHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA