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The map label for this gene is hmeC [H]

Identifier: 193211708

GI number: 193211708

Start: 38678

End: 39673

Strand: Direct

Name: hmeC [H]

Synonym: Cpar_0033

Alternate gene names: 193211708

Gene position: 38678-39673 (Clockwise)

Preceding gene: 193211707

Following gene: 193211709

Centisome position: 1.69

GC content: 58.43

Gene sequence:

>996_bases
ATGAGAAAAGTGCTGCAACCGCTGCTGCTGGTGCTCGTGCTCGCCCTGATTCCGTATGTCGGCGTCACCTACGGCAAGCT
CGACTACCTGTTCGGTATCATTATTCCCTACACGGCCGTCGCCATTCTGGTGCTCGGTATGCTTTGGCGGTTGATTGATT
GGGTTCGCCGCCCGGTGCCGTTCCGCATCCCGACCACCTGCGGTCAGGAGAAGTCGCTGGACTGGGTCAAAACCAATCCG
CTCGAAAGCCCCTCGAACCCCTTCATGGCGGCTATGCGGGTGCTCTCCGAGGTGTTCCTGTTCCGCTCGCTCTTCCGCAA
CACCAAGGCTGAACTGCACGGTGGGCCGAAGCTCGCATACGGTTCGCACAAGTGGCTGTGGCTGGGTGGCCTTGCGTTCC
ACTGGTCGCTGCTGATCATTGTTCTGCGTCATGCGCGCTTTTTCTTTATGACCACGCCCGCGCCTATCGAGATGATCGAA
ACCTTCGACCGCTTCCTCGATGTGACCGTGCCTGCGTTCTTCATCACCGATGCCATCGTGCTTGCCGCCATCACCTTCCT
GGTGCTGCGCCGTTTTTCGGACGAGAAGATGCGGCTGCTGTCGCTCTCGACCGACTACTTCCCGCTCTTTCTGATCGGGG
GGATCGTGACCGCCGGAATCAGTATGCGCTACGTGACCAAGGTGAATGTCATGCCGGTCAAAGGACTGGGGATGACGCTC
GCAAGCTTCGGTTTCACTGCGCCTGAGCCGATCGGCGCGCTGTTCTACGTCCACCTGTTCCTCGTCTGCGTGCTGCTGGC
TTACATCCCGTTCAGCAAGCTGGTGCACATGGGCGGCATCTTCATGAGCCCGACGCGCAACCTGCCCAACGATAGCCGCG
CAAAGCGCCACAAGAATCCGTGGAATCCCGACATCAAGTTCCGCTCCTATGCCGAATACGAGGATGAGTTCCGCGAGAAA
ATGAAAAAAGCTGGCATTCCGGTCGATAAGCAATAA

Upstream 100 bases:

>100_bases
AAGCGTTCGACAGCTACATGAAGCATCGCGAAACCATCTATCAGCTCAAATTCGATGAGGGCCGTCGCAAAATGCACATG
GCGCTCAGGAGGGCCGAGGC

Downstream 100 bases:

>100_bases
CGATATGTCCAAATACGCTCCAAAAACCGAAGAGCTCAAAAAAGAGTTCGAAGAGAAGAAGCCGCGGCTCCTGAAAGGGA
AATTCGACGGCATGGACTGG

Product: nitrate reductase subunit gamma

Products: NA

Alternate protein names: Hme subunit C [H]

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MRKVLQPLLLVLVLALIPYVGVTYGKLDYLFGIIIPYTAVAILVLGMLWRLIDWVRRPVPFRIPTTCGQEKSLDWVKTNP
LESPSNPFMAAMRVLSEVFLFRSLFRNTKAELHGGPKLAYGSHKWLWLGGLAFHWSLLIIVLRHARFFFMTTPAPIEMIE
TFDRFLDVTVPAFFITDAIVLAAITFLVLRRFSDEKMRLLSLSTDYFPLFLIGGIVTAGISMRYVTKVNVMPVKGLGMTL
ASFGFTAPEPIGALFYVHLFLVCVLLAYIPFSKLVHMGGIFMSPTRNLPNDSRAKRHKNPWNPDIKFRSYAEYEDEFREK
MKKAGIPVDKQ

Sequences:

>Translated_331_residues
MRKVLQPLLLVLVLALIPYVGVTYGKLDYLFGIIIPYTAVAILVLGMLWRLIDWVRRPVPFRIPTTCGQEKSLDWVKTNP
LESPSNPFMAAMRVLSEVFLFRSLFRNTKAELHGGPKLAYGSHKWLWLGGLAFHWSLLIIVLRHARFFFMTTPAPIEMIE
TFDRFLDVTVPAFFITDAIVLAAITFLVLRRFSDEKMRLLSLSTDYFPLFLIGGIVTAGISMRYVTKVNVMPVKGLGMTL
ASFGFTAPEPIGALFYVHLFLVCVLLAYIPFSKLVHMGGIFMSPTRNLPNDSRAKRHKNPWNPDIKFRSYAEYEDEFREK
MKKAGIPVDKQ
>Mature_331_residues
MRKVLQPLLLVLVLALIPYVGVTYGKLDYLFGIIIPYTAVAILVLGMLWRLIDWVRRPVPFRIPTTCGQEKSLDWVKTNP
LESPSNPFMAAMRVLSEVFLFRSLFRNTKAELHGGPKLAYGSHKWLWLGGLAFHWSLLIIVLRHARFFFMTTPAPIEMIE
TFDRFLDVTVPAFFITDAIVLAAITFLVLRRFSDEKMRLLSLSTDYFPLFLIGGIVTAGISMRYVTKVNVMPVKGLGMTL
ASFGFTAPEPIGALFYVHLFLVCVLLAYIPFSKLVHMGGIFMSPTRNLPNDSRAKRHKNPWNPDIKFRSYAEYEDEFREK
MKKAGIPVDKQ

Specific function: Has menaquinol-oxidizing activity. HmeC and hmeD subunits may together mediate electron transfer from menaquinol to an unidentified electron acceptor on the cytoplasmic side of the membrane [H]

COG id: COG2181

COG function: function code C; Nitrate reductase gamma subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003816 [H]

Pfam domain/function: PF02665 Nitrate_red_gam [H]

EC number: NA

Molecular weight: Translated: 37771; Mature: 37771

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKVLQPLLLVLVLALIPYVGVTYGKLDYLFGIIIPYTAVAILVLGMLWRLIDWVRRPVP
CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FRIPTTCGQEKSLDWVKTNPLESPSNPFMAAMRVLSEVFLFRSLFRNTKAELHGGPKLAY
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCC
GSHKWLWLGGLAFHWSLLIIVLRHARFFFMTTPAPIEMIETFDRFLDVTVPAFFITDAIV
CCCCEEEEHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAITFLVLRRFSDEKMRLLSLSTDYFPLFLIGGIVTAGISMRYVTKVNVMPVKGLGMTL
HHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCHHEEEEEEEEEEECCHHHHH
ASFGFTAPEPIGALFYVHLFLVCVLLAYIPFSKLVHMGGIFMSPTRNLPNDSRAKRHKNP
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHCCCC
WNPDIKFRSYAEYEDEFREKMKKAGIPVDKQ
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRKVLQPLLLVLVLALIPYVGVTYGKLDYLFGIIIPYTAVAILVLGMLWRLIDWVRRPVP
CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FRIPTTCGQEKSLDWVKTNPLESPSNPFMAAMRVLSEVFLFRSLFRNTKAELHGGPKLAY
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCC
GSHKWLWLGGLAFHWSLLIIVLRHARFFFMTTPAPIEMIETFDRFLDVTVPAFFITDAIV
CCCCEEEEHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAITFLVLRRFSDEKMRLLSLSTDYFPLFLIGGIVTAGISMRYVTKVNVMPVKGLGMTL
HHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCHHEEEEEEEEEEECCHHHHH
ASFGFTAPEPIGALFYVHLFLVCVLLAYIPFSKLVHMGGIFMSPTRNLPNDSRAKRHKNP
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHCCCC
WNPDIKFRSYAEYEDEFREKMKKAGIPVDKQ
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475; 11952791 [H]