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The map label for this gene is fccB [H]

Identifier: 193211686

GI number: 193211686

Start: 12167

End: 13453

Strand: Direct

Name: fccB [H]

Synonym: Cpar_0010

Alternate gene names: 193211686

Gene position: 12167-13453 (Clockwise)

Preceding gene: 193211685

Following gene: 193211687

Centisome position: 0.53

GC content: 57.73

Gene sequence:

>1287_bases
ATGAGTATTTCACGACGCGATTTCAATAAACTGCTTCTTTCCGGTGCGGCCGGTTCCATGTTTGGCCTGTTGGGTGCCAG
TGGCAAGGCGTTTGCCGGCACGAAACGGGTTGTGGTGGTCGGCGGCGGTTTCGGTGGCGCCTCCACAGCCAAATATCTCC
GAAAACTCGATCCTTCGATTTCAGTCACGCTGGTCGAGCCGAAGGCGGCTTTCGTTACCTGCCCCTTCAGCAACTGGGTG
CTGGGCGGCTTGAGGACGATGGCCGATATTACCCATAACTTCAATGCGCTTCAAAACACCTACGGCGTTACGGTGATTGC
CGACAAGGTTGTGTCGATCAATCCGGGCAAGCACGAAATCATGCTCGGCAGTGGCAAGCGGTTAGGGTATGACCGGCTTG
TCGTTTCACCCGGTATCGATTTCAAGTGGGAAGCCATTCCGGGCTACAGTCAGCAAATTGCTGAATCGTCTATGCCGCAC
GCATGGCAGGCCGGCGCTCAGACTGTTCTTCTCCACAAGCAGCTTCAGGCGATGAAAAACGGCGGCACCGTGCTGCTCTG
TCCGCCCGGAAATCCGTTCCGCTGCCCTCCCGGCCCTTACGAGCGCGCAAGCCTTATTGCCCATTACCTGAAACAGCACA
AGCCGAAGTCGAAGGTCGTGATCCTCGATGCCAAGGACAAGTTCTCAAAGCAGGGCCTGTTCACGAAGGGCTGGGAGCGG
CTCTATCCGGGCATGATCGAGTGGCACGCAGCATCGAGCGGTGGCAAGGTGCTCGGTGTTGATGCCAAGGCAATGACTGT
CGAGACCGATTTCGGGCCGGTTAAGGGTGATGTGATCAACGTCATCCCGCCACAGAAGGCCGGAAAACTGGCCTTTGACG
CAGGGCTGACCAACGAAAGCGGCTGGTGTCCGGTTGATCCCTCTTCGTTCGAATCCACGATTCATCCCGGCATTCACGTC
ATCGGCGACTCCTGTATTGCCGGCGCGATGCCCAAGTCCGGATTTGCAGCCAGCAGCCAGGGCAAGGTTGCTGCGGCGGC
GATTATCAACCTGCTGAACGGTCACAAGCCGGTGCCTCCATCGCTGGTGAATACCTGCTACAGCCTCATCGGAACGAATT
ACGGCGTCTCGGTCGCCGCGGTGTATGAGCTGTCCGACAAGGGAATCGTCAGCATTCCGGGTTCCGGAGGTCTCACTCCT
GCCGACGCCAGCGACGATCAGCTAGCACAGGAGGCGATGTTCGCTGAAGGGTGGTACACCAATATCAGCAAAGATATCTG
GGGGTGA

Upstream 100 bases:

>100_bases
GGGGCGTCATGCCAAAGGGTATTCCGACGAGGAGATTCACCAGATCGCCGAGTACTTTGGATCGCTTTCAACCATGAACA
ATTAATCCGGGGAGGCAGCT

Downstream 100 bases:

>100_bases
CCCGGAAAACATTGAGGCGTGATCGTCACGCTTCGCCGTCACTGCAAATGCCGCGATGACCATCATCATCGCGGCATTTG
TTTTGATGGTTTTTCACCCA

Product: Flavocytochrome c sulfide dehydrogenase

Products: NA

Alternate protein names: FCSD; Flavocytochrome c flavoprotein subunit; FC [H]

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MSISRRDFNKLLLSGAAGSMFGLLGASGKAFAGTKRVVVVGGGFGGASTAKYLRKLDPSISVTLVEPKAAFVTCPFSNWV
LGGLRTMADITHNFNALQNTYGVTVIADKVVSINPGKHEIMLGSGKRLGYDRLVVSPGIDFKWEAIPGYSQQIAESSMPH
AWQAGAQTVLLHKQLQAMKNGGTVLLCPPGNPFRCPPGPYERASLIAHYLKQHKPKSKVVILDAKDKFSKQGLFTKGWER
LYPGMIEWHAASSGGKVLGVDAKAMTVETDFGPVKGDVINVIPPQKAGKLAFDAGLTNESGWCPVDPSSFESTIHPGIHV
IGDSCIAGAMPKSGFAASSQGKVAAAAIINLLNGHKPVPPSLVNTCYSLIGTNYGVSVAAVYELSDKGIVSIPGSGGLTP
ADASDDQLAQEAMFAEGWYTNISKDIWG

Sequences:

>Translated_428_residues
MSISRRDFNKLLLSGAAGSMFGLLGASGKAFAGTKRVVVVGGGFGGASTAKYLRKLDPSISVTLVEPKAAFVTCPFSNWV
LGGLRTMADITHNFNALQNTYGVTVIADKVVSINPGKHEIMLGSGKRLGYDRLVVSPGIDFKWEAIPGYSQQIAESSMPH
AWQAGAQTVLLHKQLQAMKNGGTVLLCPPGNPFRCPPGPYERASLIAHYLKQHKPKSKVVILDAKDKFSKQGLFTKGWER
LYPGMIEWHAASSGGKVLGVDAKAMTVETDFGPVKGDVINVIPPQKAGKLAFDAGLTNESGWCPVDPSSFESTIHPGIHV
IGDSCIAGAMPKSGFAASSQGKVAAAAIINLLNGHKPVPPSLVNTCYSLIGTNYGVSVAAVYELSDKGIVSIPGSGGLTP
ADASDDQLAQEAMFAEGWYTNISKDIWG
>Mature_427_residues
SISRRDFNKLLLSGAAGSMFGLLGASGKAFAGTKRVVVVGGGFGGASTAKYLRKLDPSISVTLVEPKAAFVTCPFSNWVL
GGLRTMADITHNFNALQNTYGVTVIADKVVSINPGKHEIMLGSGKRLGYDRLVVSPGIDFKWEAIPGYSQQIAESSMPHA
WQAGAQTVLLHKQLQAMKNGGTVLLCPPGNPFRCPPGPYERASLIAHYLKQHKPKSKVVILDAKDKFSKQGLFTKGWERL
YPGMIEWHAASSGGKVLGVDAKAMTVETDFGPVKGDVINVIPPQKAGKLAFDAGLTNESGWCPVDPSSFESTIHPGIHVI
GDSCIAGAMPKSGFAASSQGKVAAAAIINLLNGHKPVPPSLVNTCYSLIGTNYGVSVAAVYELSDKGIVSIPGSGGLTPA
DASDDQLAQEAMFAEGWYTNISKDIWG

Specific function: Unknown

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016156
- InterPro:   IPR013027
- InterPro:   IPR015323
- InterPro:   IPR015904
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09242 FCSD-flav_bind; PF07992 Pyr_redox_2 [H]

EC number: NA

Molecular weight: Translated: 45144; Mature: 45013

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISRRDFNKLLLSGAAGSMFGLLGASGKAFAGTKRVVVVGGGFGGASTAKYLRKLDPSI
CCCCHHHHHHHHHHCCCCHHHHHHCCCCCEECCCCEEEEEECCCCCHHHHHHHHHCCCCE
SVTLVEPKAAFVTCPFSNWVLGGLRTMADITHNFNALQNTYGVTVIADKVVSINPGKHEI
EEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCEEE
MLGSGKRLGYDRLVVSPGIDFKWEAIPGYSQQIAESSMPHAWQAGAQTVLLHKQLQAMKN
EEECCCCCCCCEEEECCCCCEEEECCCCHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHC
GGTVLLCPPGNPFRCPPGPYERASLIAHYLKQHKPKSKVVILDAKDKFSKQGLFTKGWER
CCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCCCCHHCHHH
LYPGMIEWHAASSGGKVLGVDAKAMTVETDFGPVKGDVINVIPPQKAGKLAFDAGLTNES
HCCCCEEEEECCCCCEEEEECCEEEEEECCCCCCCCCEEEECCCCCCCCEEEECCCCCCC
GWCPVDPSSFESTIHPGIHVIGDSCIAGAMPKSGFAASSQGKVAAAAIINLLNGHKPVPP
CCCCCCCHHHHHHCCCCEEEECCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCH
SLVNTCYSLIGTNYGVSVAAVYELSDKGIVSIPGSGGLTPADASDDQLAQEAMFAEGWYT
HHHHHHHHHHCCCCCEEEEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCC
NISKDIWG
CCHHHHCC
>Mature Secondary Structure 
SISRRDFNKLLLSGAAGSMFGLLGASGKAFAGTKRVVVVGGGFGGASTAKYLRKLDPSI
CCCHHHHHHHHHHCCCCHHHHHHCCCCCEECCCCEEEEEECCCCCHHHHHHHHHCCCCE
SVTLVEPKAAFVTCPFSNWVLGGLRTMADITHNFNALQNTYGVTVIADKVVSINPGKHEI
EEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCEEE
MLGSGKRLGYDRLVVSPGIDFKWEAIPGYSQQIAESSMPHAWQAGAQTVLLHKQLQAMKN
EEECCCCCCCCEEEECCCCCEEEECCCCHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHC
GGTVLLCPPGNPFRCPPGPYERASLIAHYLKQHKPKSKVVILDAKDKFSKQGLFTKGWER
CCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCCCCHHCHHH
LYPGMIEWHAASSGGKVLGVDAKAMTVETDFGPVKGDVINVIPPQKAGKLAFDAGLTNES
HCCCCEEEEECCCCCEEEEECCEEEEEECCCCCCCCCEEEECCCCCCCCEEEECCCCCCC
GWCPVDPSSFESTIHPGIHVIGDSCIAGAMPKSGFAASSQGKVAAAAIINLLNGHKPVPP
CCCCCCCHHHHHHCCCCEEEECCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCH
SLVNTCYSLIGTNYGVSVAAVYELSDKGIVSIPGSGGLTPADASDDQLAQEAMFAEGWYT
HHHHHHHHHHCCCCCEEEEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCC
NISKDIWG
CCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8390993; 1649169; 7939681 [H]