| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193214491
Identifier: 193214491
GI number: 193214491
Start: 920966
End: 923725
Strand: Direct
Name: 193214491
Synonym: Ctha_0775
Alternate gene names: NA
Gene position: 920966-923725 (Clockwise)
Preceding gene: 193214490
Following gene: 193214492
Centisome position: 27.96
GC content: 49.86
Gene sequence:
>2760_bases ATGCACAAGAAAATAAATAGCAGCATTGCCGTTGTCGTTCTCATCATTGCGCAGATTTTGTATCTGCTAACCATGGCGCC GACATTCTCATTCTGGGATTGCGGCGAATTCATTGCGACCGCCTACACGCTCGGCGTCCCGCACCCGCCCGGCGCGCCAT TCTTCTTGATTGTCGGCAGGCTCTTTTCCATGATTCCCTTTTTTGAAGACATCGGCGCACGGGTCAATCTCATCAGTACG ATTTCCAGTTCCGTCACCGTGATGCTGACTTATTTAATTATCGTCCGCTTCATCATTCTTTACCGCGACAAAAACCCGAA CGACTGGTCGCTTTCCGAGAAAATTTCCGCTTATGGCTCGGGCGTCGTCGGCTCGCTCGCGCTGGCATTTTCCGATAGTT TTTGGTTCAACGCGGTGGAAACGGAAGTCTATGCCGCCTCGATTTTTTTCACGGCCATTGTGATTTGGCTAATTCTAAAA TGGAACGAAGAAGCTGATCAGGAAGGCAACGAACGCTGGCTCATGGTGCTGATGTACATGATGGGACTTTCTATCGGCGT TCACCTGTTGAACTTGCTGGCGATTTTCGCCATCGCGCTGGTTTATTATTATCACCGCTATGAAGTGAACGTGAAATCGT TCATTTGGCTTATCGTGATTTCGTCCGGCCTGTTTTTCCTGATTTATCCGGGCATCATTAAGTTTTTACCGGCATTGATG AACAGCGTCTCGCCGTGGATTGCCGTGGTTGCGGCAGCTGGACTCGGCTACGCGATTTATTACACGCAAAAAGAGCGGAT GCGCATCATGAACACCATTGTGGTGTCGCTCTTTTTGATTGTGCTGGGCTACACGACTTACACCGTCATTTTCATTCGTG CGCAGGCCGACCCACCGATTAACGAAAACGCGCCAACCACGATGAAAACTTTCCATTCGTACCTGAACCGCGAACAATAT GGCGACTTGCCGCTCTGGCCGCGCCGCTGGTCGAGCGACCCAACCCATCAAAGAAATTATAGCAAATACGACAGCGAGTT CGATTACTTCTGGAATTACCAATTAGTTCACATGTACGCGCGTTATTTCGGCTGGCAATTCATCGGGCGCGCAGGCGATG TGCAAGATAGCGGCGTCGATTGGTCAAAGCTTTGGGGATTGCCCTTTGTGCTGGGAATGTTCGGCATGTATCACCACTTC CGGCGACAATGGACAATGGGACTCGTTGTCGGCGCGCTCTTCATGGTGACGGGCTTTGCGCTGATTCTTTACCTAAACCA AACCGAGCCGCAACCGCGCGAACGAGATTATAGCTATGTCGGCAGCTTTTTCGCCTTCGCCATTTGGATTGGCATCGGCA TCGACGGGTTGTTTGAAGCTCTGCGCGAAAGCTTTCGGGACGAAAAAACGCTCGTGCCTGGCGCTGCGGCGCTTTGCCTC TGCGGATTGCTTTTTGTCGACGGGCGCATGCTTCAGGTCAATTATTACGACCACAGCCGTGCAAATAATTACAGCCCTTG GGATTATGCTTATAATCTTTTGCAAAGCTGCGACAAAGACGCTGTGCTTTTCACAAATGGCGACAACGACACTTTCCCGC TTTGGTATTTGCAGGAAGTCGCCCGCATCAGAACCGATGTGCGCGTGGTGAATTTAAGCCTTGCCAACACCGATTGGTAC ATTTTGCAACTCAAAAATGAATCTCCGCGCGGGGCGAAAAAAGTTAAGTTCCGACTTTCCGACGATCAAATTCGCCAGCT TTCCTACATGCGTTGGGATGCGAAGCGGATTTCGTTGCCCGTTCCGCAAAACAAAATAACGCCGCGCGGCGATCTGATTA CAAGCGAAACCGACACAACCGATATTCACGCACCCAAGCCGCCGGCTCAGCTTGTGGATAAAATTGAATGGACATTCAGC CCCGCGATTAGCGTTCCAGGACGCTCCGGCGAACAGCCGCAAGGCTTCATTCGCGCACAAGATGTGGTCGTTTATGAAGT GGTGGCAAACAATATTTGGGAGCGCCCTGTTTATTTTGCCATCACGGTTAGCGAAAGCAACATGATTGGCCTGAACCAAT ATCTGCGCTTGGACGGCTTGGCCTATAAAATCGTGCCGGTTAAATCCAGCAAAGCGTTTGATTATGTCGAGCCGGACATT TTGTACGGCAAGCTGATGAACACCTTTCAATATCGCAATCTCGGAAACGAAGATGTGTATTATGAGGAAACCACACGGCG CATGGTCAGCAACTACAAGAATATTTTCATGCGACTCGCCGCCGAATATGCCACTTCGCCAAACGCGTCTTCCGAAATTA AAACGGCGGACGGCAGCATGAAACGCGTTCAAAATAAAGATCTCGCGATCAAAGTATTGGATAAAGCAGAGGAAATTTTG CCGAATGAGCGCTACGAAATCGATTATCGGTTGCTGAGCGGCGTCATCAGTCTTTATGCAAACCTCGGCGAAAACAGCAA AGCGCGCGCGCTGTTGCCGGAACTTCAGGAAAAAGCGAATCAATACGATTCAGGTGGAGATCCCAGACCGAAGTTTGTGC TTGCACAGGCATATAAAGAAGTCGGTGCTTACGAACAAGCCGAAGCGCTCTACCAAGAACTTTACAGCAGATTTCAAGAT CCGATGCTCAAACAAGAGCTTAATGAGATTCGACGCACTTTGGGAAGAAACACAACCGGAAATGACGCCAGTGCATCGGA GAGCTCACTTGATTCGATCGAAAAAACTTTACAGCCATGA
Upstream 100 bases:
>100_bases CACTGGCCGATTCCATAGCTGAAACATTTATGGTTGAGTAATGGCCTTGCAAATGCAAATCAACACTGATCAGCGATTTA CAAACTGAAAGAAAGTTCTG
Downstream 100 bases:
>100_bases GTACCATTTCAGAAACAAAGATTCATCCATTAGCCAGCGTAAGTTCAACTGCTAAAATCGGAAACGGCGTAAAAATACAC CCGTTTGCGGTTATCGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 919; Mature: 919
Protein sequence:
>919_residues MHKKINSSIAVVVLIIAQILYLLTMAPTFSFWDCGEFIATAYTLGVPHPPGAPFFLIVGRLFSMIPFFEDIGARVNLIST ISSSVTVMLTYLIIVRFIILYRDKNPNDWSLSEKISAYGSGVVGSLALAFSDSFWFNAVETEVYAASIFFTAIVIWLILK WNEEADQEGNERWLMVLMYMMGLSIGVHLLNLLAIFAIALVYYYHRYEVNVKSFIWLIVISSGLFFLIYPGIIKFLPALM NSVSPWIAVVAAAGLGYAIYYTQKERMRIMNTIVVSLFLIVLGYTTYTVIFIRAQADPPINENAPTTMKTFHSYLNREQY GDLPLWPRRWSSDPTHQRNYSKYDSEFDYFWNYQLVHMYARYFGWQFIGRAGDVQDSGVDWSKLWGLPFVLGMFGMYHHF RRQWTMGLVVGALFMVTGFALILYLNQTEPQPRERDYSYVGSFFAFAIWIGIGIDGLFEALRESFRDEKTLVPGAAALCL CGLLFVDGRMLQVNYYDHSRANNYSPWDYAYNLLQSCDKDAVLFTNGDNDTFPLWYLQEVARIRTDVRVVNLSLANTDWY ILQLKNESPRGAKKVKFRLSDDQIRQLSYMRWDAKRISLPVPQNKITPRGDLITSETDTTDIHAPKPPAQLVDKIEWTFS PAISVPGRSGEQPQGFIRAQDVVVYEVVANNIWERPVYFAITVSESNMIGLNQYLRLDGLAYKIVPVKSSKAFDYVEPDI LYGKLMNTFQYRNLGNEDVYYEETTRRMVSNYKNIFMRLAAEYATSPNASSEIKTADGSMKRVQNKDLAIKVLDKAEEIL PNERYEIDYRLLSGVISLYANLGENSKARALLPELQEKANQYDSGGDPRPKFVLAQAYKEVGAYEQAEALYQELYSRFQD PMLKQELNEIRRTLGRNTTGNDASASESSLDSIEKTLQP
Sequences:
>Translated_919_residues MHKKINSSIAVVVLIIAQILYLLTMAPTFSFWDCGEFIATAYTLGVPHPPGAPFFLIVGRLFSMIPFFEDIGARVNLIST ISSSVTVMLTYLIIVRFIILYRDKNPNDWSLSEKISAYGSGVVGSLALAFSDSFWFNAVETEVYAASIFFTAIVIWLILK WNEEADQEGNERWLMVLMYMMGLSIGVHLLNLLAIFAIALVYYYHRYEVNVKSFIWLIVISSGLFFLIYPGIIKFLPALM NSVSPWIAVVAAAGLGYAIYYTQKERMRIMNTIVVSLFLIVLGYTTYTVIFIRAQADPPINENAPTTMKTFHSYLNREQY GDLPLWPRRWSSDPTHQRNYSKYDSEFDYFWNYQLVHMYARYFGWQFIGRAGDVQDSGVDWSKLWGLPFVLGMFGMYHHF RRQWTMGLVVGALFMVTGFALILYLNQTEPQPRERDYSYVGSFFAFAIWIGIGIDGLFEALRESFRDEKTLVPGAAALCL CGLLFVDGRMLQVNYYDHSRANNYSPWDYAYNLLQSCDKDAVLFTNGDNDTFPLWYLQEVARIRTDVRVVNLSLANTDWY ILQLKNESPRGAKKVKFRLSDDQIRQLSYMRWDAKRISLPVPQNKITPRGDLITSETDTTDIHAPKPPAQLVDKIEWTFS PAISVPGRSGEQPQGFIRAQDVVVYEVVANNIWERPVYFAITVSESNMIGLNQYLRLDGLAYKIVPVKSSKAFDYVEPDI LYGKLMNTFQYRNLGNEDVYYEETTRRMVSNYKNIFMRLAAEYATSPNASSEIKTADGSMKRVQNKDLAIKVLDKAEEIL PNERYEIDYRLLSGVISLYANLGENSKARALLPELQEKANQYDSGGDPRPKFVLAQAYKEVGAYEQAEALYQELYSRFQD PMLKQELNEIRRTLGRNTTGNDASASESSLDSIEKTLQP >Mature_919_residues MHKKINSSIAVVVLIIAQILYLLTMAPTFSFWDCGEFIATAYTLGVPHPPGAPFFLIVGRLFSMIPFFEDIGARVNLIST ISSSVTVMLTYLIIVRFIILYRDKNPNDWSLSEKISAYGSGVVGSLALAFSDSFWFNAVETEVYAASIFFTAIVIWLILK WNEEADQEGNERWLMVLMYMMGLSIGVHLLNLLAIFAIALVYYYHRYEVNVKSFIWLIVISSGLFFLIYPGIIKFLPALM NSVSPWIAVVAAAGLGYAIYYTQKERMRIMNTIVVSLFLIVLGYTTYTVIFIRAQADPPINENAPTTMKTFHSYLNREQY GDLPLWPRRWSSDPTHQRNYSKYDSEFDYFWNYQLVHMYARYFGWQFIGRAGDVQDSGVDWSKLWGLPFVLGMFGMYHHF RRQWTMGLVVGALFMVTGFALILYLNQTEPQPRERDYSYVGSFFAFAIWIGIGIDGLFEALRESFRDEKTLVPGAAALCL CGLLFVDGRMLQVNYYDHSRANNYSPWDYAYNLLQSCDKDAVLFTNGDNDTFPLWYLQEVARIRTDVRVVNLSLANTDWY ILQLKNESPRGAKKVKFRLSDDQIRQLSYMRWDAKRISLPVPQNKITPRGDLITSETDTTDIHAPKPPAQLVDKIEWTFS PAISVPGRSGEQPQGFIRAQDVVVYEVVANNIWERPVYFAITVSESNMIGLNQYLRLDGLAYKIVPVKSSKAFDYVEPDI LYGKLMNTFQYRNLGNEDVYYEETTRRMVSNYKNIFMRLAAEYATSPNASSEIKTADGSMKRVQNKDLAIKVLDKAEEIL PNERYEIDYRLLSGVISLYANLGENSKARALLPELQEKANQYDSGGDPRPKFVLAQAYKEVGAYEQAEALYQELYSRFQD PMLKQELNEIRRTLGRNTTGNDASASESSLDSIEKTLQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 105190; Mature: 105190
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKKINSSIAVVVLIIAQILYLLTMAPTFSFWDCGEFIATAYTLGVPHPPGAPFFLIVGR CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHH LFSMIPFFEDIGARVNLISTISSSVTVMLTYLIIVRFIILYRDKNPNDWSLSEKISAYGS HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCC GVVGSLALAFSDSFWFNAVETEVYAASIFFTAIVIWLILKWNEEADQEGNERWLMVLMYM CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHH MGLSIGVHLLNLLAIFAIALVYYYHRYEVNVKSFIWLIVISSGLFFLIYPGIIKFLPALM HHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH NSVSPWIAVVAAAGLGYAIYYTQKERMRIMNTIVVSLFLIVLGYTTYTVIFIRAQADPPI HCCCHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCC NENAPTTMKTFHSYLNREQYGDLPLWPRRWSSDPTHQRNYSKYDSEFDYFWNYQLVHMYA CCCCCHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH RYFGWQFIGRAGDVQDSGVDWSKLWGLPFVLGMFGMYHHFRRQWTMGLVVGALFMVTGFA HHHHHHHHCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILYLNQTEPQPRERDYSYVGSFFAFAIWIGIGIDGLFEALRESFRDEKTLVPGAAALCL HHEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHH CGLLFVDGRMLQVNYYDHSRANNYSPWDYAYNLLQSCDKDAVLFTNGDNDTFPLWYLQEV HHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH ARIRTDVRVVNLSLANTDWYILQLKNESPRGAKKVKFRLSDDQIRQLSYMRWDAKRISLP HHHHHCEEEEEEEEECCCEEEEEECCCCCCCCEEEEEEECHHHHHHHHHHHHCCHHCCCC VPQNKITPRGDLITSETDTTDIHAPKPPAQLVDKIEWTFSPAISVPGRSGEQPQGFIRAQ CCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCCEEHH DVVVYEVVANNIWERPVYFAITVSESNMIGLNQYLRLDGLAYKIVPVKSSKAFDYVEPDI HHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHCCCEEEEEEECCCCCCCCCCCHH LYGKLMNTFQYRNLGNEDVYYEETTRRMVSNYKNIFMRLAAEYATSPNASSEIKTADGSM HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH KRVQNKDLAIKVLDKAEEILPNERYEIDYRLLSGVISLYANLGENSKARALLPELQEKAN HHHCCCCCEEEEHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH QYDSGGDPRPKFVLAQAYKEVGAYEQAEALYQELYSRFQDPMLKQELNEIRRTLGRNTTG CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCC NDASASESSLDSIEKTLQP CCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MHKKINSSIAVVVLIIAQILYLLTMAPTFSFWDCGEFIATAYTLGVPHPPGAPFFLIVGR CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHH LFSMIPFFEDIGARVNLISTISSSVTVMLTYLIIVRFIILYRDKNPNDWSLSEKISAYGS HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCC GVVGSLALAFSDSFWFNAVETEVYAASIFFTAIVIWLILKWNEEADQEGNERWLMVLMYM CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHH MGLSIGVHLLNLLAIFAIALVYYYHRYEVNVKSFIWLIVISSGLFFLIYPGIIKFLPALM HHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH NSVSPWIAVVAAAGLGYAIYYTQKERMRIMNTIVVSLFLIVLGYTTYTVIFIRAQADPPI HCCCHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCC NENAPTTMKTFHSYLNREQYGDLPLWPRRWSSDPTHQRNYSKYDSEFDYFWNYQLVHMYA CCCCCHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH RYFGWQFIGRAGDVQDSGVDWSKLWGLPFVLGMFGMYHHFRRQWTMGLVVGALFMVTGFA HHHHHHHHCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILYLNQTEPQPRERDYSYVGSFFAFAIWIGIGIDGLFEALRESFRDEKTLVPGAAALCL HHEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHH CGLLFVDGRMLQVNYYDHSRANNYSPWDYAYNLLQSCDKDAVLFTNGDNDTFPLWYLQEV HHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH ARIRTDVRVVNLSLANTDWYILQLKNESPRGAKKVKFRLSDDQIRQLSYMRWDAKRISLP HHHHHCEEEEEEEEECCCEEEEEECCCCCCCCEEEEEEECHHHHHHHHHHHHCCHHCCCC VPQNKITPRGDLITSETDTTDIHAPKPPAQLVDKIEWTFSPAISVPGRSGEQPQGFIRAQ CCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCCEEHH DVVVYEVVANNIWERPVYFAITVSESNMIGLNQYLRLDGLAYKIVPVKSSKAFDYVEPDI HHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHCCCEEEEEEECCCCCCCCCCCHH LYGKLMNTFQYRNLGNEDVYYEETTRRMVSNYKNIFMRLAAEYATSPNASSEIKTADGSM HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH KRVQNKDLAIKVLDKAEEILPNERYEIDYRLLSGVISLYANLGENSKARALLPELQEKAN HHHCCCCCEEEEHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH QYDSGGDPRPKFVLAQAYKEVGAYEQAEALYQELYSRFQDPMLKQELNEIRRTLGRNTTG CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCC NDASASESSLDSIEKTLQP CCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA