| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is lpxA [H]
Identifier: 193214492
GI number: 193214492
Start: 923722
End: 924528
Strand: Direct
Name: lpxA [H]
Synonym: Ctha_0776
Alternate gene names: 193214492
Gene position: 923722-924528 (Clockwise)
Preceding gene: 193214491
Following gene: 193214493
Centisome position: 28.05
GC content: 49.81
Gene sequence:
>807_bases ATGAGTACCATTTCAGAAACAAAGATTCATCCATTAGCCAGCGTAAGTTCAACTGCTAAAATCGGAAACGGCGTAAAAAT ACACCCGTTTGCGGTTATCGAAGACGATGTAGAAATTGATGACGGCGCGATTATCGACCCGCACGCGGTGCTGCTGAGCG GCGTGCGAATTGGCAAAGATTGCCACATTCACTCCGGCGCGGTGCTTGGTGCAAAGCCGCAAGATTTGAAATTTCGCGGC GAAAAAACTTATGTATTTATCGGCGACCGCAGCGTTATTCGCGAGTGCGTCACCATTAATGTTGGCACAAAAGCCTCCGG CCAAACCATCATCGGTTCGGATTGTTTGCTCATGGCCTATGTTCATGTCGGACATGATTGCATCATCGGCAACCATGTGA TTATCGCCAACACGGTTCAATTTGGCGGCCATTGCGAGGTGGGCGATTATGTCGTGATTGGTGGCATGACGGGCTTGCAC CAGTTCGTGCGCGTCGGTCGGCATGTGATGCTCGGCGCCATGACGAAAAATGTGCATGACATTCCGCCGTATGTGACGAC ATCGCACGACCGCTACGAAGGCGTCAATGTCATTGGGCTGAAACGGCGCGGCTATTCCTCCGAAACGATTTCGCACATCC GTGACGTGTATCGCGTGATTTTCCAATCGGGCTTGCTTATTAAAAACGCTGTCGAAAAAGTTAAAGCCGAATTTCCGAAA ACGCCTGAAGTGGAAGAAATTCTCGCCTTCTTTGAAGCCGAAAGCAAACGAAAATACATCCGGCCATATATGGTGGGAAA AGCCTAA
Upstream 100 bases:
>100_bases AGCTTAATGAGATTCGACGCACTTTGGGAAGAAACACAACCGGAAATGACGCCAGTGCATCGGAGAGCTCACTTGATTCG ATCGAAAAAACTTTACAGCC
Downstream 100 bases:
>100_bases TTTTTCATTTTAGTTAATAGAGACGCGAATTTTTGCGTCTCTATTTGTTTACGTTCGGCCTTTAATTGAGATTTTGTCGA GCCGTTTTAGGCGAAGCATC
Product: UDP-N-acetylglucosamine acyltransferase
Products: NA
Alternate protein names: UDP-N-acetylglucosamine acyltransferase [H]
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MSTISETKIHPLASVSSTAKIGNGVKIHPFAVIEDDVEIDDGAIIDPHAVLLSGVRIGKDCHIHSGAVLGAKPQDLKFRG EKTYVFIGDRSVIRECVTINVGTKASGQTIIGSDCLLMAYVHVGHDCIIGNHVIIANTVQFGGHCEVGDYVVIGGMTGLH QFVRVGRHVMLGAMTKNVHDIPPYVTTSHDRYEGVNVIGLKRRGYSSETISHIRDVYRVIFQSGLLIKNAVEKVKAEFPK TPEVEEILAFFEAESKRKYIRPYMVGKA
Sequences:
>Translated_268_residues MSTISETKIHPLASVSSTAKIGNGVKIHPFAVIEDDVEIDDGAIIDPHAVLLSGVRIGKDCHIHSGAVLGAKPQDLKFRG EKTYVFIGDRSVIRECVTINVGTKASGQTIIGSDCLLMAYVHVGHDCIIGNHVIIANTVQFGGHCEVGDYVVIGGMTGLH QFVRVGRHVMLGAMTKNVHDIPPYVTTSHDRYEGVNVIGLKRRGYSSETISHIRDVYRVIFQSGLLIKNAVEKVKAEFPK TPEVEEILAFFEAESKRKYIRPYMVGKA >Mature_267_residues STISETKIHPLASVSSTAKIGNGVKIHPFAVIEDDVEIDDGAIIDPHAVLLSGVRIGKDCHIHSGAVLGAKPQDLKFRGE KTYVFIGDRSVIRECVTINVGTKASGQTIIGSDCLLMAYVHVGHDCIIGNHVIIANTVQFGGHCEVGDYVVIGGMTGLHQ FVRVGRHVMLGAMTKNVHDIPPYVTTSHDRYEGVNVIGLKRRGYSSETISHIRDVYRVIFQSGLLIKNAVEKVKAEFPKT PEVEEILAFFEAESKRKYIRPYMVGKA
Specific function: Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell [H]
COG id: COG1043
COG function: function code M; Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family. LpxA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786378, Length=257, Percent_Identity=44.3579766536965, Blast_Score=201, Evalue=5e-53, Organism=Escherichia coli, GI1786376, Length=192, Percent_Identity=30.2083333333333, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001451 - InterPro: IPR010137 - InterPro: IPR011004 [H]
Pfam domain/function: PF00132 Hexapep [H]
EC number: =2.3.1.129 [H]
Molecular weight: Translated: 29304; Mature: 29173
Theoretical pI: Translated: 7.98; Mature: 7.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTISETKIHPLASVSSTAKIGNGVKIHPFAVIEDDVEIDDGAIIDPHAVLLSGVRIGKD CCCCCCCCCCCHHHCCCHHHCCCCEEEEEEEEEECCCCCCCCCEECHHHHHHHCCEECCC CHIHSGAVLGAKPQDLKFRGEKTYVFIGDRSVIRECVTINVGTKASGQTIIGSDCLLMAY CEEECCEEECCCCCCCEEECCEEEEEECCHHHHHHHHEEECCCCCCCCEEECCCHHHHHH VHVGHDCIIGNHVIIANTVQFGGHCEVGDYVVIGGMTGLHQFVRVGRHVMLGAMTKNVHD HHCCCEEEECCEEEEEEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHEEHHHHCCCCC IPPYVTTSHDRYEGVNVIGLKRRGYSSETISHIRDVYRVIFQSGLLIKNAVEKVKAEFPK CCCCEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC TPEVEEILAFFEAESKRKYIRPYMVGKA CCCHHHHHHHHHHHCCHHHCCCEECCCC >Mature Secondary Structure STISETKIHPLASVSSTAKIGNGVKIHPFAVIEDDVEIDDGAIIDPHAVLLSGVRIGKD CCCCCCCCCCHHHCCCHHHCCCCEEEEEEEEEECCCCCCCCCEECHHHHHHHCCEECCC CHIHSGAVLGAKPQDLKFRGEKTYVFIGDRSVIRECVTINVGTKASGQTIIGSDCLLMAY CEEECCEEECCCCCCCEEECCEEEEEECCHHHHHHHHEEECCCCCCCCEEECCCHHHHHH VHVGHDCIIGNHVIIANTVQFGGHCEVGDYVVIGGMTGLHQFVRVGRHVMLGAMTKNVHD HHCCCEEEECCEEEEEEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHEEHHHHCCCCC IPPYVTTSHDRYEGVNVIGLKRRGYSSETISHIRDVYRVIFQSGLLIKNAVEKVKAEFPK CCCCEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC TPEVEEILAFFEAESKRKYIRPYMVGKA CCCHHHHHHHHHHHCCHHHCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA