| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193214472
Identifier: 193214472
GI number: 193214472
Start: 889289
End: 889915
Strand: Direct
Name: 193214472
Synonym: Ctha_0755
Alternate gene names: NA
Gene position: 889289-889915 (Clockwise)
Preceding gene: 193214471
Following gene: 193214476
Centisome position: 27.0
GC content: 40.35
Gene sequence:
>627_bases ATGCCAAGAAAAACAGCATCATCTGTATCAGCCAAACCGGCTTCTGAAAAAATTGAAGTGGTGTCTTCTGCCAATCATCA AACGGATTCATCAGCAGTTGATGCTTCAACAACGAAAACAGCGGCAAAGAATGTCAGCCAAGTTTTGAATTCTAAAACAA CAATCAGTTCCAGAAAAATGTCTGCTAAAACACGGAAAGTCTCCTCAGCACCTTCCATGGAAAATGAGAATTCAAAACAT GAGGAGCAGGATCGTTTGAGTGTTACTTATTTAAGTGCGAAAGAACTTAAACATTTTGAGCAGCTTTTGTTAAAAAAACG AGAGGAAGTACTGCGCGACTTGGAAATTTTGAAGTCGTCTTTTTCCGATGAAAACGAGGAAGATAGTGTCAACTCGAGCT ATTCGATGCATATGGCTGACCACGGCACCGAGACGATGGATCGGGAACAGCGCTTCTTATTTATCTCAAGAGACGAAAAA TACTTAAGCTATATTGATAAAGCGCTCGAACGGATTAAGAACAAAACTTACGGCATTTGTGCTATTTCTGGAAAGCCCAT TCCTAAAGCGCGATTAGAAGCGGTTCCTCATACAGGAGTAAGAATTGAGTATAAAAAACGCTCCTAA
Upstream 100 bases:
>100_bases ATCGGTGGCAAAAACGGAAGACATTAACGGCGAAATTTGCAGAATGGCATTGGAGAAAAAATAGCACCACTTCCGGCAGA AACTTTAAAACTTAAGTATC
Downstream 100 bases:
>100_bases AGAAAAGGTTGTATAACAAGGAAAAAGAGCCTGCCCACAGCTTTTTCCTTGTTATACTTTGATCGATTATTCAAGCCCCA TCTCAATCGTCATTTTCATA
Product: TraR/DksA family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TraR/DksA Family; TraR/DksA Family Transcriptional Regulator; Regulatory Protein; DNAk Suppressor Protein; Transcriptional Regulator Trar/Dksa Family
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MPRKTASSVSAKPASEKIEVVSSANHQTDSSAVDASTTKTAAKNVSQVLNSKTTISSRKMSAKTRKVSSAPSMENENSKH EEQDRLSVTYLSAKELKHFEQLLLKKREEVLRDLEILKSSFSDENEEDSVNSSYSMHMADHGTETMDREQRFLFISRDEK YLSYIDKALERIKNKTYGICAISGKPIPKARLEAVPHTGVRIEYKKRS
Sequences:
>Translated_208_residues MPRKTASSVSAKPASEKIEVVSSANHQTDSSAVDASTTKTAAKNVSQVLNSKTTISSRKMSAKTRKVSSAPSMENENSKH EEQDRLSVTYLSAKELKHFEQLLLKKREEVLRDLEILKSSFSDENEEDSVNSSYSMHMADHGTETMDREQRFLFISRDEK YLSYIDKALERIKNKTYGICAISGKPIPKARLEAVPHTGVRIEYKKRS >Mature_207_residues PRKTASSVSAKPASEKIEVVSSANHQTDSSAVDASTTKTAAKNVSQVLNSKTTISSRKMSAKTRKVSSAPSMENENSKHE EQDRLSVTYLSAKELKHFEQLLLKKREEVLRDLEILKSSFSDENEEDSVNSSYSMHMADHGTETMDREQRFLFISRDEKY LSYIDKALERIKNKTYGICAISGKPIPKARLEAVPHTGVRIEYKKRS
Specific function: Unknown
COG id: COG1734
COG function: function code T; DnaK suppressor protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23432; Mature: 23300
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: PS51128 ZF_DKSA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRKTASSVSAKPASEKIEVVSSANHQTDSSAVDASTTKTAAKNVSQVLNSKTTISSRKM CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHCHHHHHHHHH SAKTRKVSSAPSMENENSKHEEQDRLSVTYLSAKELKHFEQLLLKKREEVLRDLEILKSS HHHHHHHCCCCCCCCCCCCHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSDENEEDSVNSSYSMHMADHGTETMDREQRFLFISRDEKYLSYIDKALERIKNKTYGIC CCCCCCCCCCCCCEEEEECCCCCHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEE AISGKPIPKARLEAVPHTGVRIEYKKRS EECCCCCCHHHHHCCCCCCCEEEEECCC >Mature Secondary Structure PRKTASSVSAKPASEKIEVVSSANHQTDSSAVDASTTKTAAKNVSQVLNSKTTISSRKM CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHCHHHHHHHHH SAKTRKVSSAPSMENENSKHEEQDRLSVTYLSAKELKHFEQLLLKKREEVLRDLEILKSS HHHHHHHCCCCCCCCCCCCHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSDENEEDSVNSSYSMHMADHGTETMDREQRFLFISRDEKYLSYIDKALERIKNKTYGIC CCCCCCCCCCCCCEEEEECCCCCHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEE AISGKPIPKARLEAVPHTGVRIEYKKRS EECCCCCCHHHHHCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA