| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193214458
Identifier: 193214458
GI number: 193214458
Start: 870352
End: 870819
Strand: Direct
Name: 193214458
Synonym: Ctha_0741
Alternate gene names: NA
Gene position: 870352-870819 (Clockwise)
Preceding gene: 193214457
Following gene: 193214463
Centisome position: 26.43
GC content: 46.37
Gene sequence:
>468_bases ATGAAAAAAACTTTGCTAATCATTGTGGCGGTGCTCATTGGCGCACAGCTTATTCCGGTTGAGCGTAGCAATCCGCCGGT TCAGGCCGATTTCAACGAGAATGACGAAGTGAAAAAAGTTTTCAAGCGCGCTTGTTACGATTGCCATTCGAATGAAACGG TTTGGCCTTTGTATTCTTATGTGGCGCCTGTTTCTTGGATGGTTTCCGCTCACGTAGAAGAAGGACGCGAAGAGCTGAAC TTTTCGGATTGGAATCATTACACCGACAAGAAAAAACGCAAGAAAGCTGAAGAAGCTTTGGAGGAAATTGAAAAAGGAAA AATGCCAATGCCTGGCTATACGATGATTCACAAGGAGGCTGCGCTTTCCGAGCAAGACATTCAGCTCGTTCGGAGATGGG CAAATGAAACTTATGGCAGTAGCCTAAGCGAGCCTCATGAAGAAGCCCGTCCTGCTGCGCAAGATTAA
Upstream 100 bases:
>100_bases ACCGAATTTTACTTGGTGTTTTTCTGCTTGCCATGCTTTCGATGGGAAAACTTGAAGCATTTTAGCGACTTCTTTTTTGA AGAATCAATAGGAATAGAAA
Downstream 100 bases:
>100_bases ACCATTCAATCCTTTTCCCTTGTAAAAATCAAAAAGCCGTGCGTTGATTCATGCACGGCTTTTTTTGATCATCTAAAATT TAGCGTTCCCTTTTCAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MKKTLLIIVAVLIGAQLIPVERSNPPVQADFNENDEVKKVFKRACYDCHSNETVWPLYSYVAPVSWMVSAHVEEGREELN FSDWNHYTDKKKRKKAEEALEEIEKGKMPMPGYTMIHKEAALSEQDIQLVRRWANETYGSSLSEPHEEARPAAQD
Sequences:
>Translated_155_residues MKKTLLIIVAVLIGAQLIPVERSNPPVQADFNENDEVKKVFKRACYDCHSNETVWPLYSYVAPVSWMVSAHVEEGREELN FSDWNHYTDKKKRKKAEEALEEIEKGKMPMPGYTMIHKEAALSEQDIQLVRRWANETYGSSLSEPHEEARPAAQD >Mature_155_residues MKKTLLIIVAVLIGAQLIPVERSNPPVQADFNENDEVKKVFKRACYDCHSNETVWPLYSYVAPVSWMVSAHVEEGREELN FSDWNHYTDKKKRKKAEEALEEIEKGKMPMPGYTMIHKEAALSEQDIQLVRRWANETYGSSLSEPHEEARPAAQD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17833; Mature: 17833
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTLLIIVAVLIGAQLIPVERSNPPVQADFNENDEVKKVFKRACYDCHSNETVWPLYSY CCHHHHHHHHHHHCCEECCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH VAPVSWMVSAHVEEGREELNFSDWNHYTDKKKRKKAEEALEEIEKGKMPMPGYTMIHKEA HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH ALSEQDIQLVRRWANETYGSSLSEPHEEARPAAQD HCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCC >Mature Secondary Structure MKKTLLIIVAVLIGAQLIPVERSNPPVQADFNENDEVKKVFKRACYDCHSNETVWPLYSY CCHHHHHHHHHHHCCEECCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH VAPVSWMVSAHVEEGREELNFSDWNHYTDKKKRKKAEEALEEIEKGKMPMPGYTMIHKEA HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH ALSEQDIQLVRRWANETYGSSLSEPHEEARPAAQD HCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA