| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
Click here to switch to the map view.
The map label for this gene is 193214463
Identifier: 193214463
GI number: 193214463
Start: 878459
End: 879298
Strand: Direct
Name: 193214463
Synonym: Ctha_0746
Alternate gene names: NA
Gene position: 878459-879298 (Clockwise)
Preceding gene: 193214458
Following gene: 193214464
Centisome position: 26.67
GC content: 45.48
Gene sequence:
>840_bases ATGCGGAAATTATTAACTCTCTTATCGCTGTATATAGTTTTTTCTACCCTTCTCATTTCAGGATGCGGCGGCTCAAAAGA AGCACAAGATGGCGACGGGCTCGACTCGCTGGCTCAGGCTTCAGCGCTGGATTCTTTAGCCATGCTGGCTGACTCTTTAC GCGGCGACTCTCTTGGTAGCTCAGTAGCCATCGGCGAGTTGGATTCCGTGACGATCACAACAGACACGCGCATCGATCCA GTTGCAGCCTTTCGAAGCGGAAACCTTTCGGCTAAAGCCGTTGGTGCTGAACTGATCGAGGAAAAAGGCCTGGGCTGTAA ATATTATCTGCCTAAAACCTGGCAAACGTCTCGCAGGGATTATAAAAACCTTGTGAATTATTTTTATGATGGCCGCATCA GCGTTACCATCTCGGTCGCAAACTCTGTGTTTGACTCTTTAAGTTTTTGGGCGCAAGTTCAGGAAGCCATTACTTATGGA AAAAATCAAATTCCAAAATTGCATTGGCGATTTGATCCACCCGTTGAACAAAATGCCGCAGCCGCTCAAACCTACCTTGG CCGCTATGAGTTTGGCGGAAAACAGTACAACACCGCGTACTATTTTCATGGCAAATATCAATTTCACATCATTGTAAGCC ACAAAGTCGATGCGTTAACTGACAGCGACGCGCAAGTCATTAATTATTTGATGGCTTCGTTTGTTGCAGAAGAACCTACG GTTGAAATTCCAAAACCGGTTACTATCAGCGATTCGCAAGAAGAAACGCCGGAAGAAAAGCCAAATACAACGCCAGAGCC AAAAGCCAAACCAAAGGCAAAAGTGAAAAAATCAAAATAA
Upstream 100 bases:
>100_bases GTTTTTAAATAGTGATTACTTAAATTTTGCTCGGAATTTTTAAGGCGGCACGCACTTCGCTTTCAAAAGAATCGAATAGA TAAACCCAAAGCATAATGAC
Downstream 100 bases:
>100_bases GGGCTCGCCTTCCGCTGTTGACATTGATGAAAACAGCTTTTTCCTGAAACAACTCTTGCACGCGCTTTTAGGAAATCATT TGGCGTTCAACACTTTTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MRKLLTLLSLYIVFSTLLISGCGGSKEAQDGDGLDSLAQASALDSLAMLADSLRGDSLGSSVAIGELDSVTITTDTRIDP VAAFRSGNLSAKAVGAELIEEKGLGCKYYLPKTWQTSRRDYKNLVNYFYDGRISVTISVANSVFDSLSFWAQVQEAITYG KNQIPKLHWRFDPPVEQNAAAAQTYLGRYEFGGKQYNTAYYFHGKYQFHIIVSHKVDALTDSDAQVINYLMASFVAEEPT VEIPKPVTISDSQEETPEEKPNTTPEPKAKPKAKVKKSK
Sequences:
>Translated_279_residues MRKLLTLLSLYIVFSTLLISGCGGSKEAQDGDGLDSLAQASALDSLAMLADSLRGDSLGSSVAIGELDSVTITTDTRIDP VAAFRSGNLSAKAVGAELIEEKGLGCKYYLPKTWQTSRRDYKNLVNYFYDGRISVTISVANSVFDSLSFWAQVQEAITYG KNQIPKLHWRFDPPVEQNAAAAQTYLGRYEFGGKQYNTAYYFHGKYQFHIIVSHKVDALTDSDAQVINYLMASFVAEEPT VEIPKPVTISDSQEETPEEKPNTTPEPKAKPKAKVKKSK >Mature_279_residues MRKLLTLLSLYIVFSTLLISGCGGSKEAQDGDGLDSLAQASALDSLAMLADSLRGDSLGSSVAIGELDSVTITTDTRIDP VAAFRSGNLSAKAVGAELIEEKGLGCKYYLPKTWQTSRRDYKNLVNYFYDGRISVTISVANSVFDSLSFWAQVQEAITYG KNQIPKLHWRFDPPVEQNAAAAQTYLGRYEFGGKQYNTAYYFHGKYQFHIIVSHKVDALTDSDAQVINYLMASFVAEEPT VEIPKPVTISDSQEETPEEKPNTTPEPKAKPKAKVKKSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30698; Mature: 30698
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLLTLLSLYIVFSTLLISGCGGSKEAQDGDGLDSLAQASALDSLAMLADSLRGDSLGS CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC SVAIGELDSVTITTDTRIDPVAAFRSGNLSAKAVGAELIEEKGLGCKYYLPKTWQTSRRD EEEECCCCEEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHH YKNLVNYFYDGRISVTISVANSVFDSLSFWAQVQEAITYGKNQIPKLHWRFDPPVEQNAA HHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHH AAQTYLGRYEFGGKQYNTAYYFHGKYQFHIIVSHKVDALTDSDAQVINYLMASFVAEEPT HHHHHHHHHHCCCEEECEEEEEECEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCC VEIPKPVTISDSQEETPEEKPNTTPEPKAKPKAKVKKSK CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRKLLTLLSLYIVFSTLLISGCGGSKEAQDGDGLDSLAQASALDSLAMLADSLRGDSLGS CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC SVAIGELDSVTITTDTRIDPVAAFRSGNLSAKAVGAELIEEKGLGCKYYLPKTWQTSRRD EEEECCCCEEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHH YKNLVNYFYDGRISVTISVANSVFDSLSFWAQVQEAITYGKNQIPKLHWRFDPPVEQNAA HHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHH AAQTYLGRYEFGGKQYNTAYYFHGKYQFHIIVSHKVDALTDSDAQVINYLMASFVAEEPT HHHHHHHHHHCCCEEECEEEEEECEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCC VEIPKPVTISDSQEETPEEKPNTTPEPKAKPKAKVKKSK CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA