| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193214439
Identifier: 193214439
GI number: 193214439
Start: 847363
End: 848133
Strand: Direct
Name: 193214439
Synonym: Ctha_0722
Alternate gene names: NA
Gene position: 847363-848133 (Clockwise)
Preceding gene: 193214438
Following gene: 193214447
Centisome position: 25.73
GC content: 50.45
Gene sequence:
>771_bases ATGAGCGCGAAAAATCAGGTTTTTGAGAAATTGTTGGCGGCCAAAGCGCGAAAAGGCGCAGGGTTTTTGCTTTTAATCGA CCCCGATAAATATGATGCGTCGGGGTTGGAGCAGGTCGTTAAAAACGCAACAGCTTTTGGCGCGGATGGCTTTTTGATTG GCGGCAGCCTACTTTTCTCAAACCGATTTGATGCGTATGTTCAGCAAATCAAATCTGCGACAGATTTACCCGTCATTCTT TTTCCCGGCCATTCGGTTCAAATTTCGCCCTCAGCAGACGCCATTTTATTTCTTTCGCTTTTGAGCGGACGAAATCCTGA ATTTCTCATCGGCCATCATGTAACGGCTGCGCCGAGCATCAAGGCATTCGGACTTGAATCCATGCCGACGGCCTACTTGC TCGTGGAATCTGGCCGAAAAACTGCCGTTGAATTTATGAGCAACACCGAACCAATTCCACGCCACAAACCTGAGCTTGCT GCGGTTCATGCGCTCGCAGCCGAATATTTAGGCATGAAAATGATTTATCTCGAAGCTGGCAGCGGCGCGGACGAATCCGT GCCGGAGGAAATGGTTGAGCTGGTTTGTCAAACGGTCAGTTTGCCCGTGATTGTCGGCGGCGGTATCCGTTCAGCGCAAG CGGTGCGAAGCAAAGTAGATGCGGGCGCAAGCTTCGTGGTCGTTGGCAACGCATTTGAAACACGAAACGACGCGAATTAT CTGAAAACCATGATTGACGCCGCGCACCCCAATTTGCCCAAAGCGATTTGA
Upstream 100 bases:
>100_bases TTTTTGCGGATGACGAAAAAGCGACGGCGTGCTACGAGGCAATGAGAAAACGCTACCCAACCTCGCTGACGCCAAAGTCC TTCAAAATGAAGTGACCCGA
Downstream 100 bases:
>100_bases GCCAGTCTTCAAAATGCTATAAAATCGATTCTAATTTTTCCGAAACGGTTTTCGAAAAGCTGACTGGCACGAACACCTCT TCCGAGTACAAATAATTTTC
Product: geranylgeranylglyceryl phosphate synthase-like protein
Products: NA
Alternate protein names: GGGP synthase; GGGPS; (S)-3-O-geranylgeranylglyceryl phosphate synthase; Phosphoglycerol geranylgeranyltransferase [H]
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MSAKNQVFEKLLAAKARKGAGFLLLIDPDKYDASGLEQVVKNATAFGADGFLIGGSLLFSNRFDAYVQQIKSATDLPVIL FPGHSVQISPSADAILFLSLLSGRNPEFLIGHHVTAAPSIKAFGLESMPTAYLLVESGRKTAVEFMSNTEPIPRHKPELA AVHALAAEYLGMKMIYLEAGSGADESVPEEMVELVCQTVSLPVIVGGGIRSAQAVRSKVDAGASFVVVGNAFETRNDANY LKTMIDAAHPNLPKAI
Sequences:
>Translated_256_residues MSAKNQVFEKLLAAKARKGAGFLLLIDPDKYDASGLEQVVKNATAFGADGFLIGGSLLFSNRFDAYVQQIKSATDLPVIL FPGHSVQISPSADAILFLSLLSGRNPEFLIGHHVTAAPSIKAFGLESMPTAYLLVESGRKTAVEFMSNTEPIPRHKPELA AVHALAAEYLGMKMIYLEAGSGADESVPEEMVELVCQTVSLPVIVGGGIRSAQAVRSKVDAGASFVVVGNAFETRNDANY LKTMIDAAHPNLPKAI >Mature_255_residues SAKNQVFEKLLAAKARKGAGFLLLIDPDKYDASGLEQVVKNATAFGADGFLIGGSLLFSNRFDAYVQQIKSATDLPVILF PGHSVQISPSADAILFLSLLSGRNPEFLIGHHVTAAPSIKAFGLESMPTAYLLVESGRKTAVEFMSNTEPIPRHKPELAA VHALAAEYLGMKMIYLEAGSGADESVPEEMVELVCQTVSLPVIVGGGIRSAQAVRSKVDAGASFVVVGNAFETRNDANYL KTMIDAAHPNLPKAI
Specific function: Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). This reaction is the first ether-bond-formation step in the biosynthesis of archaeal membr
COG id: COG1646
COG function: function code R; Predicted phosphate-binding enzymes, TIM-barrel fold
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GGGP synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008205 - InterPro: IPR010946 [H]
Pfam domain/function: PF01884 PcrB [H]
EC number: =2.5.1.41 [H]
Molecular weight: Translated: 27216; Mature: 27084
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAKNQVFEKLLAAKARKGAGFLLLIDPDKYDASGLEQVVKNATAFGADGFLIGGSLLFS CCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEECCCCEEC NRFDAYVQQIKSATDLPVILFPGHSVQISPSADAILFLSLLSGRNPEFLIGHHVTAAPSI CHHHHHHHHHHCCCCCCEEEECCCEEEECCCCCHHHHHHHHCCCCCCEEEECCEECCCCC KAFGLESMPTAYLLVESGRKTAVEFMSNTEPIPRHKPELAAVHALAAEYLGMKMIYLEAG CCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCEEEEEEECC SGADESVPEEMVELVCQTVSLPVIVGGGIRSAQAVRSKVDAGASFVVVGNAFETRNDANY CCCCCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHH LKTMIDAAHPNLPKAI HHHHHHHCCCCCCCCC >Mature Secondary Structure SAKNQVFEKLLAAKARKGAGFLLLIDPDKYDASGLEQVVKNATAFGADGFLIGGSLLFS CHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEECCCCEEC NRFDAYVQQIKSATDLPVILFPGHSVQISPSADAILFLSLLSGRNPEFLIGHHVTAAPSI CHHHHHHHHHHCCCCCCEEEECCCEEEECCCCCHHHHHHHHCCCCCCEEEECCEECCCCC KAFGLESMPTAYLLVESGRKTAVEFMSNTEPIPRHKPELAAVHALAAEYLGMKMIYLEAG CCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCEEEEEEECC SGADESVPEEMVELVCQTVSLPVIVGGGIRSAQAVRSKVDAGASFVVVGNAFETRNDANY CCCCCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHH LKTMIDAAHPNLPKAI HHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA