Definition Chloroherpeton thalassium ATCC 35110 chromosome, complete genome.
Accession NC_011026
Length 3,293,456

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The map label for this gene is yufQ [H]

Identifier: 193214416

GI number: 193214416

Start: 817579

End: 818445

Strand: Direct

Name: yufQ [H]

Synonym: Ctha_0699

Alternate gene names: 193214416

Gene position: 817579-818445 (Clockwise)

Preceding gene: 193214412

Following gene: 193214417

Centisome position: 24.82

GC content: 47.4

Gene sequence:

>867_bases
ATGCTTGCCGAAGCCATCGGATTTCTTTTTCAAGTTTTTAGAATTGGTGTTCCATACCTTCTAACTTCTCTGGGCGCAAC
GTATTCAGAACGGGGCGGCGTGATTAATCTCGCCCTGGACGGCTTAATTTTAGTTGGTGCGTTTGGGGCTACCGTTGGGC
AATTTTATACCGAATCGGCTTTTTTGGGTATATTTTTAGCGGTTTTACTGGGTTTGCTCATATCGCTGCTGCACGCCTAT
ATGACCATTACACTCAAGGCAAACCAAATCGTCAGTGGCGTTGCCATCAATATTTTAGTAGCCGGTTTAACCCAATTTTT
TCTCAAAGTCATTTTCAATAGTTCGTCGAACTCCGAGCGCATCGCAGGCATCGACGCGCCAAACGTGTTACTTAATCCCA
TTTTCATTTTTGCGATTGTTGCTGTTCCGCTTTCACACTACATTTTTTTCTACACGCCTTATGGCCTTCGGCTTCGCGCA
ACAGGCGAAAACGCCAAAGCGGTCGATTCGCTGGGCATTTCTGTTTCGCTCATGCGTTATAGCGGCGTGCTGATTTCTGG
CGTATTGGCGGCGTTGGCTGGCGCATTTCTTGCCTTCGAGCAGCATAGTTTTACAGATGGGATGTCTGCCGGGCGCGGCT
ACATTTCACTTGCTGCAATGATTATCGGGAAATGGCAACCGTTAGGCGCTGCTGCCGCCGGATTAATGTTTGCTGCCACC
GAGTCAATGGAACTTCGCCTTCAAAGCGAAGCCATTCCATCGCAATTGATACAAGCGCTGCCTTATTTAATTACAATTGT
CGTTTTAATTGGGTTTATCGGCAAATCCGTGCCGCCGCGCGAAGATGGCATTCCCTATGAAAAATAA

Upstream 100 bases:

>100_bases
GTGGTTAAGAGATTGTGTTCTTTTGTAAATTAAAGTCTTTTTGAAAAAACATTGCAGTGTGTTCAACCTAACACAATTTT
AATAAAAAACATAGCCATTT

Downstream 100 bases:

>100_bases
TTTTTTTGATCCGATTGCGTGGGTGATTTTTTTGAGAGGTTAATTGTGTTCCATAAAAATTTGGATATCTTTACAATCTG
TGTTTTATAAAAATTCTTTT

Product: inner-membrane translocator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MLAEAIGFLFQVFRIGVPYLLTSLGATYSERGGVINLALDGLILVGAFGATVGQFYTESAFLGIFLAVLLGLLISLLHAY
MTITLKANQIVSGVAINILVAGLTQFFLKVIFNSSSNSERIAGIDAPNVLLNPIFIFAIVAVPLSHYIFFYTPYGLRLRA
TGENAKAVDSLGISVSLMRYSGVLISGVLAALAGAFLAFEQHSFTDGMSAGRGYISLAAMIIGKWQPLGAAAAGLMFAAT
ESMELRLQSEAIPSQLIQALPYLITIVVLIGFIGKSVPPREDGIPYEK

Sequences:

>Translated_288_residues
MLAEAIGFLFQVFRIGVPYLLTSLGATYSERGGVINLALDGLILVGAFGATVGQFYTESAFLGIFLAVLLGLLISLLHAY
MTITLKANQIVSGVAINILVAGLTQFFLKVIFNSSSNSERIAGIDAPNVLLNPIFIFAIVAVPLSHYIFFYTPYGLRLRA
TGENAKAVDSLGISVSLMRYSGVLISGVLAALAGAFLAFEQHSFTDGMSAGRGYISLAAMIIGKWQPLGAAAAGLMFAAT
ESMELRLQSEAIPSQLIQALPYLITIVVLIGFIGKSVPPREDGIPYEK
>Mature_288_residues
MLAEAIGFLFQVFRIGVPYLLTSLGATYSERGGVINLALDGLILVGAFGATVGQFYTESAFLGIFLAVLLGLLISLLHAY
MTITLKANQIVSGVAINILVAGLTQFFLKVIFNSSSNSERIAGIDAPNVLLNPIFIFAIVAVPLSHYIFFYTPYGLRLRA
TGENAKAVDSLGISVSLMRYSGVLISGVLAALAGAFLAFEQHSFTDGMSAGRGYISLAAMIIGKWQPLGAAAAGLMFAAT
ESMELRLQSEAIPSQLIQALPYLITIVVLIGFIGKSVPPREDGIPYEK

Specific function: Part of the binding-protein-dependent transport system. Probably responsible for the translocation of the substrates across the membrane [H]

COG id: COG1079

COG function: function code R; Uncharacterized ABC-type transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 30606; Mature: 30606

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAEAIGFLFQVFRIGVPYLLTSLGATYSERGGVINLALDGLILVGAFGATVGQFYTESA
CHHHHHHHHHHHHHHCHHHHHHHHCCCHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
FLGIFLAVLLGLLISLLHAYMTITLKANQIVSGVAINILVAGLTQFFLKVIFNSSSNSER
HHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
IAGIDAPNVLLNPIFIFAIVAVPLSHYIFFYTPYGLRLRATGENAKAVDSLGISVSLMRY
EECCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCCCHHHHHCCCEEEHHHH
SGVLISGVLAALAGAFLAFEQHSFTDGMSAGRGYISLAAMIIGKWQPLGAAAAGLMFAAT
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHC
ESMELRLQSEAIPSQLIQALPYLITIVVLIGFIGKSVPPREDGIPYEK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLAEAIGFLFQVFRIGVPYLLTSLGATYSERGGVINLALDGLILVGAFGATVGQFYTESA
CHHHHHHHHHHHHHHCHHHHHHHHCCCHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
FLGIFLAVLLGLLISLLHAYMTITLKANQIVSGVAINILVAGLTQFFLKVIFNSSSNSER
HHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
IAGIDAPNVLLNPIFIFAIVAVPLSHYIFFYTPYGLRLRATGENAKAVDSLGISVSLMRY
EECCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCCCHHHHHCCCEEEHHHH
SGVLISGVLAALAGAFLAFEQHSFTDGMSAGRGYISLAAMIIGKWQPLGAAAAGLMFAAT
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHC
ESMELRLQSEAIPSQLIQALPYLITIVVLIGFIGKSVPPREDGIPYEK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]