| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193214412
Identifier: 193214412
GI number: 193214412
Start: 811784
End: 812407
Strand: Direct
Name: 193214412
Synonym: Ctha_0695
Alternate gene names: NA
Gene position: 811784-812407 (Clockwise)
Preceding gene: 193214411
Following gene: 193214416
Centisome position: 24.65
GC content: 48.08
Gene sequence:
>624_bases ATGATGAATAAGAACGGTCAAGAAATCATGGACAAATCGATGAGGCCGCACGAACAACATCGGGAAAATAAAGAGCGTGG AATTAGCCGTATTGATAGCAGCAATACACACGGCTGGTTTGTTCGAGTTTATCGCGATGAAGCGATTTATTCAAAACTAT TTAGCGATGGCCGACATGGCGGAAAACCGCAGGCATTGGAAGCTGCCGTCGATTACCGCAACGAGCTTGAAGCGCTTTTA GATAGCACCGATAATCGTCCAAGGCGCAATAATCGTTTGCCCCTTGCGCTTCGCAATAAGCGAAATAAAACGGGCGTCAT CGGGGTTTGCTACCGCGAACGCCGGCTGCCAAGCGGACGCGTTAGTAAATGTTACTCGGTGAGCTGGGCGCCAGAACCAA ATGTTCAAAAATGCACCTCATTTTCGATCACCAAGTATGGCAAAGAAGAGGCTTTTCGCCGAGCCTGTACGCTTCGCGAA CAAATGCTGAAAGAAATTGTAGGCGATGATTGCGATCTGCCAAAAAGCAGAAAAAAGCCAAAGCGCCGTAAATATGTTCG CGCCGAAAAGATCATGAAGAAACTCAAGAAAAAGCGCACCGACACAGAAGGCCTTGCCGCTTAG
Upstream 100 bases:
>100_bases CAGTGAATGTCCCGTAAAAAAAATGTGTTCTTTTGATAATTAAAACCGTTGAAAACAGGTTTTTCCTAATAGAAACCGTA ACAAAAGCAGTAACGACATT
Downstream 100 bases:
>100_bases TTTATTTGCAAGGCAGTTGCCGGTTATTCTTTCGAAATGAAAAAGCCGCCTATAAAAGGCGGCTTTTTATTTTGTTCTCA AAAGTCAATTATCCTTGAAC
Product: Pathogenesis-related transcriptional factor and ERF protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MMNKNGQEIMDKSMRPHEQHRENKERGISRIDSSNTHGWFVRVYRDEAIYSKLFSDGRHGGKPQALEAAVDYRNELEALL DSTDNRPRRNNRLPLALRNKRNKTGVIGVCYRERRLPSGRVSKCYSVSWAPEPNVQKCTSFSITKYGKEEAFRRACTLRE QMLKEIVGDDCDLPKSRKKPKRRKYVRAEKIMKKLKKKRTDTEGLAA
Sequences:
>Translated_207_residues MMNKNGQEIMDKSMRPHEQHRENKERGISRIDSSNTHGWFVRVYRDEAIYSKLFSDGRHGGKPQALEAAVDYRNELEALL DSTDNRPRRNNRLPLALRNKRNKTGVIGVCYRERRLPSGRVSKCYSVSWAPEPNVQKCTSFSITKYGKEEAFRRACTLRE QMLKEIVGDDCDLPKSRKKPKRRKYVRAEKIMKKLKKKRTDTEGLAA >Mature_207_residues MMNKNGQEIMDKSMRPHEQHRENKERGISRIDSSNTHGWFVRVYRDEAIYSKLFSDGRHGGKPQALEAAVDYRNELEALL DSTDNRPRRNNRLPLALRNKRNKTGVIGVCYRERRLPSGRVSKCYSVSWAPEPNVQKCTSFSITKYGKEEAFRRACTLRE QMLKEIVGDDCDLPKSRKKPKRRKYVRAEKIMKKLKKKRTDTEGLAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24130; Mature: 24130
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNKNGQEIMDKSMRPHEQHRENKERGISRIDSSNTHGWFVRVYRDEAIYSKLFSDGRHG CCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHCCCCC GKPQALEAAVDYRNELEALLDSTDNRPRRNNRLPLALRNKRNKTGVIGVCYRERRLPSGR CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCEEEEHHHHHCCCCCC VSKCYSVSWAPEPNVQKCTSFSITKYGKEEAFRRACTLREQMLKEIVGDDCDLPKSRKKP CCHHEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCH KRRKYVRAEKIMKKLKKKRTDTEGLAA HHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MMNKNGQEIMDKSMRPHEQHRENKERGISRIDSSNTHGWFVRVYRDEAIYSKLFSDGRHG CCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHCCCCC GKPQALEAAVDYRNELEALLDSTDNRPRRNNRLPLALRNKRNKTGVIGVCYRERRLPSGR CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCEEEEHHHHHCCCCCC VSKCYSVSWAPEPNVQKCTSFSITKYGKEEAFRRACTLREQMLKEIVGDDCDLPKSRKKP CCHHEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCH KRRKYVRAEKIMKKLKKKRTDTEGLAA HHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA