| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193214341
Identifier: 193214341
GI number: 193214341
Start: 732983
End: 733555
Strand: Direct
Name: 193214341
Synonym: Ctha_0623
Alternate gene names: NA
Gene position: 732983-733555 (Clockwise)
Preceding gene: 193214340
Following gene: 193214342
Centisome position: 22.26
GC content: 48.34
Gene sequence:
>573_bases ATGATTTTGCGATTTTTTCGCCCACATGAAAAATATTCATGGAAACAACTCGATAAAATGACGGCAAAAAAAGACGGACT TTGGACTTGGGCTTGGCACGGCGTGCTTGAAATGAAAAATCAAGGCTTTGAGGTGGTGTTCATGCAGCAGTTCGACTATA AGCGCTTTGCTGAAACCGGCGAAGCGTATTTGAAGGAACGCTTCGGCGAGGAAACCGCTGCCGCCATCGTCAAAAATAGC GACATTCCCTTTGAGCAAGAAGCCGCAAAAACGCTCTCGGAAATGATTGAACCGACGCAAGTGCCGACGCTCGCCGATTT AAAACGCCTGCTCGCTGAAGGCTATCTCGCGATTTGCAATGTCAATTCAAATCTTTTGAACGGACAAGAAGGTTTTTCCG GCCATTTCGTGCTGGTTTTCGAAATTGACGAAACGACCGTTCATGCGCACGACCCGGGACATCCGCCTGCGCCGAATCGC CAAATTCCGATCGAATCATTTGAAAAAGCGTGGGCATTTCCGAACGAATCCGATAAAACCATCATCGCGATGAAACCAAA TCGCCCGGCGTGA
Upstream 100 bases:
>100_bases AAAAAGATTTTTTAGCGCAAAAAAACAAAACGAAAAAATGAAACCTGTTCCGTTTTTTCCGAATCCCGATAACTCCCATT GCTATCAATGCTGCTTGCGC
Downstream 100 bases:
>100_bases TCAAAAAGAATATTGATTCGGTTTTAAATTGTTGTCATATATTGGAGCGGGTTCGTAATCTTAATGGCTTTTTATTACAT TTTAGCCGTTTAGGAACACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MILRFFRPHEKYSWKQLDKMTAKKDGLWTWAWHGVLEMKNQGFEVVFMQQFDYKRFAETGEAYLKERFGEETAAAIVKNS DIPFEQEAAKTLSEMIEPTQVPTLADLKRLLAEGYLAICNVNSNLLNGQEGFSGHFVLVFEIDETTVHAHDPGHPPAPNR QIPIESFEKAWAFPNESDKTIIAMKPNRPA
Sequences:
>Translated_190_residues MILRFFRPHEKYSWKQLDKMTAKKDGLWTWAWHGVLEMKNQGFEVVFMQQFDYKRFAETGEAYLKERFGEETAAAIVKNS DIPFEQEAAKTLSEMIEPTQVPTLADLKRLLAEGYLAICNVNSNLLNGQEGFSGHFVLVFEIDETTVHAHDPGHPPAPNR QIPIESFEKAWAFPNESDKTIIAMKPNRPA >Mature_190_residues MILRFFRPHEKYSWKQLDKMTAKKDGLWTWAWHGVLEMKNQGFEVVFMQQFDYKRFAETGEAYLKERFGEETAAAIVKNS DIPFEQEAAKTLSEMIEPTQVPTLADLKRLLAEGYLAICNVNSNLLNGQEGFSGHFVLVFEIDETTVHAHDPGHPPAPNR QIPIESFEKAWAFPNESDKTIIAMKPNRPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21786; Mature: 21786
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILRFFRPHEKYSWKQLDKMTAKKDGLWTWAWHGVLEMKNQGFEVVFMQQFDYKRFAETG CEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEHHHHEECCCCEEEEEEECCCHHHHHHHH EAYLKERFGEETAAAIVKNSDIPFEQEAAKTLSEMIEPTQVPTLADLKRLLAEGYLAICN HHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEE VNSNLLNGQEGFSGHFVLVFEIDETTVHAHDPGHPPAPNRQIPIESFEKAWAFPNESDKT CCCCCCCCCCCCCCCEEEEEEECCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCE IIAMKPNRPA EEEECCCCCC >Mature Secondary Structure MILRFFRPHEKYSWKQLDKMTAKKDGLWTWAWHGVLEMKNQGFEVVFMQQFDYKRFAETG CEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEHHHHEECCCCEEEEEEECCCHHHHHHHH EAYLKERFGEETAAAIVKNSDIPFEQEAAKTLSEMIEPTQVPTLADLKRLLAEGYLAICN HHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEE VNSNLLNGQEGFSGHFVLVFEIDETTVHAHDPGHPPAPNRQIPIESFEKAWAFPNESDKT CCCCCCCCCCCCCCCEEEEEEECCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCE IIAMKPNRPA EEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA