| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193214339
Identifier: 193214339
GI number: 193214339
Start: 730508
End: 731875
Strand: Direct
Name: 193214339
Synonym: Ctha_0621
Alternate gene names: NA
Gene position: 730508-731875 (Clockwise)
Preceding gene: 193214338
Following gene: 193214340
Centisome position: 22.18
GC content: 48.83
Gene sequence:
>1368_bases ATGACCATACTTACTCGTTACATTTTAAAGTCTCACATTGGGCCGTTCGTTTTCGGCTTTGCCACGGTGGTTTTTGTGTT TCTCATGCAATTTTTAGCGCGCTATTTAGATCGATTCGTGGGAAAAGGCTTGGAGATGAATGTGATCATCGAGCTCATTG TGCTGCAAATTGCCTGGATGGCCGTGCTGGCTGCCCCAATGGCCGTGCTGATTTCCACGCTGATGACTTTCGGCAACATG GTCAATTCCTCCGAAATGACAGCCATTCGCGCCAGTGGTATTTCGCTGTTGCGCATTATGATTCCAATTATTGTGGCCGG CGCGATTCTCACCTACTTGATGGAACGCTTCAACAACATCGTTTTGCCCGAAGCCAACCACCAAGCCAAAGTGCTCTTGA TGGATATTTCCAGAGCGAAACCCAGTTTTGGACTTGAGGAAAACGTTTTTTCCGATATGATTCGCGGCTACACGATCCTT GCCCGAAAAACTGACGAGAAGTCATCGAACATTGCCGGCGTCACGATTTACGACAATAGAAATAGCACGCGAAATGTTGT CATCACGGCGGACTCGGGATTTTTTGAATTTACCAGCGATTTGCGAAATATGATTATGACGCTCAAGCACGGAGAAATGC ACGAGCTCGTTAACCCTGAAAATCACTCGTATCGACGCGTGAATTTTGAAACGCATAAAGTTGTATTTGAAGCAACAGGA TACGGGTTCGAACGAACCGACGAAAATTCCATTAGCCGCGGCGATCGTGAACTTTCCGCAACCACGATGATGGACATCTG CGATAGCCTCGAGGAACGCGTTAGCAAATCCTATTCAGCTATCAACGACACGCGCGACGCCGAGCTGAGTCGCATCATGC GAACGCCGACAGGCTACGATAGCTTACCACACGCAGCGTCAATCGTGCCCGATTCATTGGATATTTTGGCGAACATTCCA CCCAAACGACGATATAGCGTGCTCGACCGCGCCATCACGCAGGCAAGAGTCCATCTGAACGAAGCCCATCATCAATATTT TTCTATCAATAGCAACACGCGCTTGATAAACAAATACCTGGTTGAAGTGCATAAAAAATATGCCATTCCGTTTGCGTGCT TGTTTTTCGTTTTTGTGGGCGTGCCGTTGGGCGTGCTTGCGCGACGCGGCGGATTCGGCATTGGCGCGGGGCTTTCCTTA ATTTTCTTTTTGCTCTACTGGGTGTTTTTAATTGGCGGCGAAAAACTGGCGGATCGAGATATTGTCAGCCCAGCGATTGC CATGTGGATGGGCAATGTGGTCATTTCAGTGATTGGCGCGGTGCTGCTGGCCTTGGTTTCGGGCGTAAAAATCAGTCGCT CGCGTTAG
Upstream 100 bases:
>100_bases GGCACTCAAAGAGCGACATTTTCAGCGGAAAATCTATCATGGGCTCAATCCGGCTTACCTGTTTCTTTTAAGGGAAAATA GAATTTTATAACCTTCATTG
Downstream 100 bases:
>100_bases ACAAAAACCTTAAAATCAAATACCATGTCAAAATTTCCCAACGACCCAAAACCGTGGAAAACCTTAAGTTCAAAATATCT TTTTAATCGGCCTTGGCTCA
Product: permease YjgP/YjgQ family protein
Products: NA
Alternate protein names: Permease; Permease YjgP/YjgQ; Permease Yjgp/Yjgq Family Protein; YjgP/YjgQ Family Permease; Permease YjgP/YjgQ Family; YjgP/YjgQ Permease
Number of amino acids: Translated: 455; Mature: 454
Protein sequence:
>455_residues MTILTRYILKSHIGPFVFGFATVVFVFLMQFLARYLDRFVGKGLEMNVIIELIVLQIAWMAVLAAPMAVLISTLMTFGNM VNSSEMTAIRASGISLLRIMIPIIVAGAILTYLMERFNNIVLPEANHQAKVLLMDISRAKPSFGLEENVFSDMIRGYTIL ARKTDEKSSNIAGVTIYDNRNSTRNVVITADSGFFEFTSDLRNMIMTLKHGEMHELVNPENHSYRRVNFETHKVVFEATG YGFERTDENSISRGDRELSATTMMDICDSLEERVSKSYSAINDTRDAELSRIMRTPTGYDSLPHAASIVPDSLDILANIP PKRRYSVLDRAITQARVHLNEAHHQYFSINSNTRLINKYLVEVHKKYAIPFACLFFVFVGVPLGVLARRGGFGIGAGLSL IFFLLYWVFLIGGEKLADRDIVSPAIAMWMGNVVISVIGAVLLALVSGVKISRSR
Sequences:
>Translated_455_residues MTILTRYILKSHIGPFVFGFATVVFVFLMQFLARYLDRFVGKGLEMNVIIELIVLQIAWMAVLAAPMAVLISTLMTFGNM VNSSEMTAIRASGISLLRIMIPIIVAGAILTYLMERFNNIVLPEANHQAKVLLMDISRAKPSFGLEENVFSDMIRGYTIL ARKTDEKSSNIAGVTIYDNRNSTRNVVITADSGFFEFTSDLRNMIMTLKHGEMHELVNPENHSYRRVNFETHKVVFEATG YGFERTDENSISRGDRELSATTMMDICDSLEERVSKSYSAINDTRDAELSRIMRTPTGYDSLPHAASIVPDSLDILANIP PKRRYSVLDRAITQARVHLNEAHHQYFSINSNTRLINKYLVEVHKKYAIPFACLFFVFVGVPLGVLARRGGFGIGAGLSL IFFLLYWVFLIGGEKLADRDIVSPAIAMWMGNVVISVIGAVLLALVSGVKISRSR >Mature_454_residues TILTRYILKSHIGPFVFGFATVVFVFLMQFLARYLDRFVGKGLEMNVIIELIVLQIAWMAVLAAPMAVLISTLMTFGNMV NSSEMTAIRASGISLLRIMIPIIVAGAILTYLMERFNNIVLPEANHQAKVLLMDISRAKPSFGLEENVFSDMIRGYTILA RKTDEKSSNIAGVTIYDNRNSTRNVVITADSGFFEFTSDLRNMIMTLKHGEMHELVNPENHSYRRVNFETHKVVFEATGY GFERTDENSISRGDRELSATTMMDICDSLEERVSKSYSAINDTRDAELSRIMRTPTGYDSLPHAASIVPDSLDILANIPP KRRYSVLDRAITQARVHLNEAHHQYFSINSNTRLINKYLVEVHKKYAIPFACLFFVFVGVPLGVLARRGGFGIGAGLSLI FFLLYWVFLIGGEKLADRDIVSPAIAMWMGNVVISVIGAVLLALVSGVKISRSR
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50914; Mature: 50783
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILTRYILKSHIGPFVFGFATVVFVFLMQFLARYLDRFVGKGLEMNVIIELIVLQIAWM CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH AVLAAPMAVLISTLMTFGNMVNSSEMTAIRASGISLLRIMIPIIVAGAILTYLMERFNNI HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE VLPEANHQAKVLLMDISRAKPSFGLEENVFSDMIRGYTILARKTDEKSSNIAGVTIYDNR ECCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCEEEEEECCCCCCCCEEEEEEECCC NSTRNVVITADSGFFEFTSDLRNMIMTLKHGEMHELVNPENHSYRRVNFETHKVVFEATG CCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEECCCHHEEEEEECC YGFERTDENSISRGDRELSATTMMDICDSLEERVSKSYSAINDTRDAELSRIMRTPTGYD CCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC SLPHAASIVPDSLDILANIPPKRRYSVLDRAITQARVHLNEAHHQYFSINSNTRLINKYL CCCCHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHH VEVHKKYAIPFACLFFVFVGVPLGVLARRGGFGIGAGLSLIFFLLYWVFLIGGEKLADRD HHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHCCHH IVSPAIAMWMGNVVISVIGAVLLALVSGVKISRSR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TILTRYILKSHIGPFVFGFATVVFVFLMQFLARYLDRFVGKGLEMNVIIELIVLQIAWM HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH AVLAAPMAVLISTLMTFGNMVNSSEMTAIRASGISLLRIMIPIIVAGAILTYLMERFNNI HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE VLPEANHQAKVLLMDISRAKPSFGLEENVFSDMIRGYTILARKTDEKSSNIAGVTIYDNR ECCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCEEEEEECCCCCCCCEEEEEEECCC NSTRNVVITADSGFFEFTSDLRNMIMTLKHGEMHELVNPENHSYRRVNFETHKVVFEATG CCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEECCCHHEEEEEECC YGFERTDENSISRGDRELSATTMMDICDSLEERVSKSYSAINDTRDAELSRIMRTPTGYD CCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC SLPHAASIVPDSLDILANIPPKRRYSVLDRAITQARVHLNEAHHQYFSINSNTRLINKYL CCCCHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHH VEVHKKYAIPFACLFFVFVGVPLGVLARRGGFGIGAGLSLIFFLLYWVFLIGGEKLADRD HHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHCCHH IVSPAIAMWMGNVVISVIGAVLLALVSGVKISRSR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA