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The map label for this gene is ybjT [C]

Identifier: 193214329

GI number: 193214329

Start: 717543

End: 718397

Strand: Direct

Name: ybjT [C]

Synonym: Ctha_0611

Alternate gene names: 193214329

Gene position: 717543-718397 (Clockwise)

Preceding gene: 193214328

Following gene: 193214331

Centisome position: 21.79

GC content: 45.61

Gene sequence:

>855_bases
ATGCAGAAAGTTTTAGTTGCCGGCGCTACCGGCTATTTGGGCAGCCATGTTGTTCGTGAGCTCAAAAAAAGAGGCTACTA
CGTTCGCGCACTGGCTCGCAATCCGAAAAAACTGACCTCCATTCAAGACAGCATCGATGAAGTTTTTACCGGCGAAGTCA
CCAAACCCGAATCGCTTGAGGGCGCGTGCAAAAATATCGATGTGCTTTTTTCCAGCATTGGCATTACGCGCCAGCAAGAC
GGCCTTAGCTACATGGATGTAGATTATCAAGGAAATAAAAATCTGCTGGAATGCGCACAAGCCAATGGCGTCTCAAAATT
TATCTACACTTCCGTTTTCAATGCGGAGAAAATGAAGCAATTGAACCCGATTCATGCCAAAATTAAATTTTCGGATGAAC
TCCGGGCTTCTGGCATGAACTACGCCATCGTCAATCCAAACGGCTTTTTCTCGGACATTGAACAATATTTTGAGATGGCT
AAATTTGGCGTGGCGTTTTTAATCGGCGATGGCACGGCGAAAATCAATCCGATTCACGGCGAAGATCTGGCGAAAGTGTG
TGTTGATGCGATCCAAAAAGACGAAAAACAAATCGATGTAGGCGGCCCCGAGATTTTTACACATCGTGAAATTTTGGAAC
TCGCATTTAAAGCGCTACACAAACATCCGCTGATTATTCAAGTGCCGCAATGGACTGTCGATTTAACCGCCGGCACGCTG
AAGCTTTTTGCTACCGAAAATATTTATAGCCCGATCGAATTTGCGATTTTGGCGCTGACGCTCGATATGGTTGCGCCTGC
TTACGGCGAGAAAAAATTGGGCGATTTTTTTGCAGAACTCGCACAAAAAGCATAG

Upstream 100 bases:

>100_bases
GCGAGCACGCCAGCGAGCGCGCCGATGGCTAACTGCCACGCGCCATCATCCGATGTTTTCGTTCAAAAATGCTCAAGATT
TTTAACCCAATCATCTCATT

Downstream 100 bases:

>100_bases
TCGGCTCAGTTCAAATCAGTCGTTCGAATTCACCTCATTTTAAAGCCTCTCCGCGCAGGAGAGGCGCTAAAAAGTCCGTT
TCAGCTTTGTAAAAACCGAC

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MQKVLVAGATGYLGSHVVRELKKRGYYVRALARNPKKLTSIQDSIDEVFTGEVTKPESLEGACKNIDVLFSSIGITRQQD
GLSYMDVDYQGNKNLLECAQANGVSKFIYTSVFNAEKMKQLNPIHAKIKFSDELRASGMNYAIVNPNGFFSDIEQYFEMA
KFGVAFLIGDGTAKINPIHGEDLAKVCVDAIQKDEKQIDVGGPEIFTHREILELAFKALHKHPLIIQVPQWTVDLTAGTL
KLFATENIYSPIEFAILALTLDMVAPAYGEKKLGDFFAELAQKA

Sequences:

>Translated_284_residues
MQKVLVAGATGYLGSHVVRELKKRGYYVRALARNPKKLTSIQDSIDEVFTGEVTKPESLEGACKNIDVLFSSIGITRQQD
GLSYMDVDYQGNKNLLECAQANGVSKFIYTSVFNAEKMKQLNPIHAKIKFSDELRASGMNYAIVNPNGFFSDIEQYFEMA
KFGVAFLIGDGTAKINPIHGEDLAKVCVDAIQKDEKQIDVGGPEIFTHREILELAFKALHKHPLIIQVPQWTVDLTAGTL
KLFATENIYSPIEFAILALTLDMVAPAYGEKKLGDFFAELAQKA
>Mature_284_residues
MQKVLVAGATGYLGSHVVRELKKRGYYVRALARNPKKLTSIQDSIDEVFTGEVTKPESLEGACKNIDVLFSSIGITRQQD
GLSYMDVDYQGNKNLLECAQANGVSKFIYTSVFNAEKMKQLNPIHAKIKFSDELRASGMNYAIVNPNGFFSDIEQYFEMA
KFGVAFLIGDGTAKINPIHGEDLAKVCVDAIQKDEKQIDVGGPEIFTHREILELAFKALHKHPLIIQVPQWTVDLTAGTL
KLFATENIYSPIEFAILALTLDMVAPAYGEKKLGDFFAELAQKA

Specific function: Putative nucleotide sugar epimerase/dehydrogenase [H]

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 31460; Mature: 31460

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKVLVAGATGYLGSHVVRELKKRGYYVRALARNPKKLTSIQDSIDEVFTGEVTKPESLE
CCCEEEECCCHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHH
GACKNIDVLFSSIGITRQQDGLSYMDVDYQGNKNLLECAQANGVSKFIYTSVFNAEKMKQ
HHHHHHHHHHHHCCCEECCCCCEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHCHHHHHH
LNPIHAKIKFSDELRASGMNYAIVNPNGFFSDIEQYFEMAKFGVAFLIGDGTAKINPIHG
CCCCEEEEEECHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCEEEEEECCCEEECCCCC
EDLAKVCVDAIQKDEKQIDVGGPEIFTHREILELAFKALHKHPLIIQVPQWTVDLTAGTL
HHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCCEE
KLFATENIYSPIEFAILALTLDMVAPAYGEKKLGDFFAELAQKA
EEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MQKVLVAGATGYLGSHVVRELKKRGYYVRALARNPKKLTSIQDSIDEVFTGEVTKPESLE
CCCEEEECCCHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHH
GACKNIDVLFSSIGITRQQDGLSYMDVDYQGNKNLLECAQANGVSKFIYTSVFNAEKMKQ
HHHHHHHHHHHHCCCEECCCCCEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHCHHHHHH
LNPIHAKIKFSDELRASGMNYAIVNPNGFFSDIEQYFEMAKFGVAFLIGDGTAKINPIHG
CCCCEEEEEECHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCEEEEEECCCEEECCCCC
EDLAKVCVDAIQKDEKQIDVGGPEIFTHREILELAFKALHKHPLIIQVPQWTVDLTAGTL
HHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCCEE
KLFATENIYSPIEFAILALTLDMVAPAYGEKKLGDFFAELAQKA
EEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]