| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193214216
Identifier: 193214216
GI number: 193214216
Start: 584231
End: 586399
Strand: Direct
Name: 193214216
Synonym: Ctha_0497
Alternate gene names: NA
Gene position: 584231-586399 (Clockwise)
Preceding gene: 193214215
Following gene: 193214217
Centisome position: 17.74
GC content: 46.84
Gene sequence:
>2169_bases ATGCAACGACTCAGACTTGCCATCTTCGCTGCCGTCGCTTTCGGCGTTCTTCTTTGTAGCCTTTCAAATACAGCTTATTC ACAACGCAAACAAAAAGAACCTATCGTTAAAACGTCACCAAGTGGCGGCGTTGAAAAAGATCCCGAAGAGCTTTTCTTAA AAAAGCTGACCAATAAATCGCCGCACCGCATTCTTCAATATGCACTGAACCAATATCAATTTGGTTTTTTTGCAAAAGCA GAAAGCCTTTTTACGGATTATCGCCAAATTTCATCGGAAGAGCCGCCCGCCGAACGAGATCTTGGCCAATTGATGCACGC CAAAACGCTGATTCGCCTCAAACGCTATCAGCCTGCAATCGAAGAACTCACCAAACTGAAATTTTCAGCCACTTATCCCG CGCTCAGGCAAGAAACGATTTTTGACCTTGGCGTAGCGGAAACACATACGGGCAAATTTTACTCTGCTGCCGAGAGATTT ATGGAAGTGGGCGGACAAACTTGGTCGACAAAAGATTCGCTTTATTTGCGAAAAAAAGCGATTACCAATTTGCGCTTGTT GGCCATGACCAATCTTTCACTGAACCAAATTGAAAAACTGATCAAAAATACGCCCTACATAAACTTGAAAGCCGTGCTGG CTGGCGAGCTCATGCGAAAATCGCTCAGCGGTGATTTTTACGACGCCCAGCCGTTAGAAACCAAAGAAACTGGCTCAGAA AAACAGGTGTCTTCACCGGCTGAAATTCTCGAATCGTCTAATTCTGGCGATCAGTTTTCAGTCCAACAGCGAAAAGACGA GGAGAAACAGAAAGTTAAAGACGAATGGGAAAGTGAGGAATATGAGGACGAAAGCGCGCGCGATGAGGACGAATCATCGT TTGAAATGGTTGTTCCTGGCGAAGTTGTAACGCTTGAGCCGCGTGGCGAGGCGTTTATCGAACGTTTGGACACGCTGTTG AGAAATCGCATCATTCCAATTATCGATACGCTCCTGATGAGCTCGGAGCTCGATCCGGCCATCCGCTCCTGGCTGATTGA CTACCGCTTCCAAGCTTCCGATGTGGCCTCGCGCCGCTATCAACATTTCCCGATCGGGGTTTTGCTTCCGATTGATTTGG ATGTGTTCGATGGCAGCGAAAGTCAACGCGTTGGTTCGCAAATTTTGACCGGCATGGCGTTGCGCGCATTTGAGCACAAC CGCAGTTCGCCAATGCGCTACATTTCTTTGCTCGTTAGAAACACAGAGGGCGTGGATTCGCTGGCGCTGATTCGAGTGAT GGACGAATTAATCGACCGCGATTCTGTAAAAATTATTTTAGGTCCGATTTTCAGCGATAAAGCCGTCATTGCTGCGCAGC ACGCGGCGGCGCGGGAATTTCCATTGATTACCCCAACAGCCACAGATGAGCGCATTACCAAAGCGCATCCGACTTGCTTT CAAATGAACCCGCCGCACAGAACTCGCGGAAAGATCATCGCGGATTATTTTCTCGAAGATTCCACCAAAAAGACATTTGG CATTTTTGCCGAACAAATGACGTATGGGGTAGAGATGGCTGAAGGGTTCAAGGATGAAGTGCTGGCTCACGGTGGAAAAA TGAAAATGTATAGTTTATTGCCTTTTGGCTTTAGGAGCTTGAAAGAAGCCGTCGACACGCTGCATCTTGAAAAGCCAGAA GATTTTATGGGCTATCCAGAAACCAAATTCGACGCGATTTATCTACCTTTAACCACCATGGAATCCATCGGCATTGCGCT CTCGCAGCTTCACTATTACAACTTCACCGGACAAATTGTAGGCTCCGGCGACTGGCACGATGCCAACGTTTTAAATCGCT TTTCCGACATGCTCAATGGCACAATCTACGCCATTGATACTTATGTTTCCTCCGCCGATCCGCGCGTATATTACACGCTT GAAAAATATTACAATTTTTGGCAAAGCCACCCGTCCACACTTTTTTGGCACGGCGCAGATGCAATTGATTATCTGACGGA GACCATTGTCAATAAAGAAATGGCATCGCCCTGCAAAATTTCCGAAGCACTTCGCCAGGCACCGCCATACAAAGCCGTTC GAACGGAAATCTTCTTTGATGGCGGGAACATCAATCAGAGTATGAACATCATGCAATTTTCTGATGGAAATATTTCAAAG CTGAAGTAA
Upstream 100 bases:
>100_bases CGTGCTATTTTGCCGGTTTCTTTCTTAGGAAACCGGCGCTTGCTTAACACAAGCGCTCTTTTTTATAAAACCTGAGAATT CGAGACATTCCTTTATCCAC
Downstream 100 bases:
>100_bases TTTCTATTTTCCCCTTTTCCCTTTGATTTTTAATAATTGCTTTCATTGGCTCGAAAAATCTTCAAATTCCGACCTTCTCA TGTTTCTTTTTTGAAACACA
Product: branched-chain amino acid ABC transporter periplasmic component-like protein
Products: NA
Alternate protein names: Branched Chain Amino Acid ABC Transporter
Number of amino acids: Translated: 722; Mature: 722
Protein sequence:
>722_residues MQRLRLAIFAAVAFGVLLCSLSNTAYSQRKQKEPIVKTSPSGGVEKDPEELFLKKLTNKSPHRILQYALNQYQFGFFAKA ESLFTDYRQISSEEPPAERDLGQLMHAKTLIRLKRYQPAIEELTKLKFSATYPALRQETIFDLGVAETHTGKFYSAAERF MEVGGQTWSTKDSLYLRKKAITNLRLLAMTNLSLNQIEKLIKNTPYINLKAVLAGELMRKSLSGDFYDAQPLETKETGSE KQVSSPAEILESSNSGDQFSVQQRKDEEKQKVKDEWESEEYEDESARDEDESSFEMVVPGEVVTLEPRGEAFIERLDTLL RNRIIPIIDTLLMSSELDPAIRSWLIDYRFQASDVASRRYQHFPIGVLLPIDLDVFDGSESQRVGSQILTGMALRAFEHN RSSPMRYISLLVRNTEGVDSLALIRVMDELIDRDSVKIILGPIFSDKAVIAAQHAAAREFPLITPTATDERITKAHPTCF QMNPPHRTRGKIIADYFLEDSTKKTFGIFAEQMTYGVEMAEGFKDEVLAHGGKMKMYSLLPFGFRSLKEAVDTLHLEKPE DFMGYPETKFDAIYLPLTTMESIGIALSQLHYYNFTGQIVGSGDWHDANVLNRFSDMLNGTIYAIDTYVSSADPRVYYTL EKYYNFWQSHPSTLFWHGADAIDYLTETIVNKEMASPCKISEALRQAPPYKAVRTEIFFDGGNINQSMNIMQFSDGNISK LK
Sequences:
>Translated_722_residues MQRLRLAIFAAVAFGVLLCSLSNTAYSQRKQKEPIVKTSPSGGVEKDPEELFLKKLTNKSPHRILQYALNQYQFGFFAKA ESLFTDYRQISSEEPPAERDLGQLMHAKTLIRLKRYQPAIEELTKLKFSATYPALRQETIFDLGVAETHTGKFYSAAERF MEVGGQTWSTKDSLYLRKKAITNLRLLAMTNLSLNQIEKLIKNTPYINLKAVLAGELMRKSLSGDFYDAQPLETKETGSE KQVSSPAEILESSNSGDQFSVQQRKDEEKQKVKDEWESEEYEDESARDEDESSFEMVVPGEVVTLEPRGEAFIERLDTLL RNRIIPIIDTLLMSSELDPAIRSWLIDYRFQASDVASRRYQHFPIGVLLPIDLDVFDGSESQRVGSQILTGMALRAFEHN RSSPMRYISLLVRNTEGVDSLALIRVMDELIDRDSVKIILGPIFSDKAVIAAQHAAAREFPLITPTATDERITKAHPTCF QMNPPHRTRGKIIADYFLEDSTKKTFGIFAEQMTYGVEMAEGFKDEVLAHGGKMKMYSLLPFGFRSLKEAVDTLHLEKPE DFMGYPETKFDAIYLPLTTMESIGIALSQLHYYNFTGQIVGSGDWHDANVLNRFSDMLNGTIYAIDTYVSSADPRVYYTL EKYYNFWQSHPSTLFWHGADAIDYLTETIVNKEMASPCKISEALRQAPPYKAVRTEIFFDGGNINQSMNIMQFSDGNISK LK >Mature_722_residues MQRLRLAIFAAVAFGVLLCSLSNTAYSQRKQKEPIVKTSPSGGVEKDPEELFLKKLTNKSPHRILQYALNQYQFGFFAKA ESLFTDYRQISSEEPPAERDLGQLMHAKTLIRLKRYQPAIEELTKLKFSATYPALRQETIFDLGVAETHTGKFYSAAERF MEVGGQTWSTKDSLYLRKKAITNLRLLAMTNLSLNQIEKLIKNTPYINLKAVLAGELMRKSLSGDFYDAQPLETKETGSE KQVSSPAEILESSNSGDQFSVQQRKDEEKQKVKDEWESEEYEDESARDEDESSFEMVVPGEVVTLEPRGEAFIERLDTLL RNRIIPIIDTLLMSSELDPAIRSWLIDYRFQASDVASRRYQHFPIGVLLPIDLDVFDGSESQRVGSQILTGMALRAFEHN RSSPMRYISLLVRNTEGVDSLALIRVMDELIDRDSVKIILGPIFSDKAVIAAQHAAAREFPLITPTATDERITKAHPTCF QMNPPHRTRGKIIADYFLEDSTKKTFGIFAEQMTYGVEMAEGFKDEVLAHGGKMKMYSLLPFGFRSLKEAVDTLHLEKPE DFMGYPETKFDAIYLPLTTMESIGIALSQLHYYNFTGQIVGSGDWHDANVLNRFSDMLNGTIYAIDTYVSSADPRVYYTL EKYYNFWQSHPSTLFWHGADAIDYLTETIVNKEMASPCKISEALRQAPPYKAVRTEIFFDGGNINQSMNIMQFSDGNISK LK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81995; Mature: 81995
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRLRLAIFAAVAFGVLLCSLSNTAYSQRKQKEPIVKTSPSGGVEKDPEELFLKKLTNKS CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHCCCC PHRILQYALNQYQFGFFAKAESLFTDYRQISSEEPPAERDLGQLMHAKTLIRLKRYQPAI HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHH EELTKLKFSATYPALRQETIFDLGVAETHTGKFYSAAERFMEVGGQTWSTKDSLYLRKKA HHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHH ITNLRLLAMTNLSLNQIEKLIKNTPYINLKAVLAGELMRKSLSGDFYDAQPLETKETGSE HCCEEEEEECCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC KQVSSPAEILESSNSGDQFSVQQRKDEEKQKVKDEWESEEYEDESARDEDESSFEMVVPG HHCCCHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCEEEECC EVVTLEPRGEAFIERLDTLLRNRIIPIIDTLLMSSELDPAIRSWLIDYRFQASDVASRRY EEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHH QHFPIGVLLPIDLDVFDGSESQRVGSQILTGMALRAFEHNRSSPMRYISLLVRNTEGVDS CCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHH LALIRVMDELIDRDSVKIILGPIFSDKAVIAAQHAAAREFPLITPTATDERITKAHPTCF HHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCEE QMNPPHRTRGKIIADYFLEDSTKKTFGIFAEQMTYGVEMAEGFKDEVLAHGGKMKMYSLL ECCCCCCCCCCEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCEEEEHHC PFGFRSLKEAVDTLHLEKPEDFMGYPETKFDAIYLPLTTMESIGIALSQLHYYNFTGQIV HHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHEECCEEEEE GSGDWHDANVLNRFSDMLNGTIYAIDTYVSSADPRVYYTLEKYYNFWQSHPSTLFWHGAD CCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCCEEEEEHHHHHHHHHCCCCEEEECCCH AIDYLTETIVNKEMASPCKISEALRQAPPYKAVRTEIFFDGGNINQSMNIMQFSDGNISK HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHEEEEEEEECCCCCCCCEEEEECCCCCCC LK CC >Mature Secondary Structure MQRLRLAIFAAVAFGVLLCSLSNTAYSQRKQKEPIVKTSPSGGVEKDPEELFLKKLTNKS CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHCCCC PHRILQYALNQYQFGFFAKAESLFTDYRQISSEEPPAERDLGQLMHAKTLIRLKRYQPAI HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHH EELTKLKFSATYPALRQETIFDLGVAETHTGKFYSAAERFMEVGGQTWSTKDSLYLRKKA HHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHH ITNLRLLAMTNLSLNQIEKLIKNTPYINLKAVLAGELMRKSLSGDFYDAQPLETKETGSE HCCEEEEEECCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC KQVSSPAEILESSNSGDQFSVQQRKDEEKQKVKDEWESEEYEDESARDEDESSFEMVVPG HHCCCHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCEEEECC EVVTLEPRGEAFIERLDTLLRNRIIPIIDTLLMSSELDPAIRSWLIDYRFQASDVASRRY EEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHH QHFPIGVLLPIDLDVFDGSESQRVGSQILTGMALRAFEHNRSSPMRYISLLVRNTEGVDS CCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHH LALIRVMDELIDRDSVKIILGPIFSDKAVIAAQHAAAREFPLITPTATDERITKAHPTCF HHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCEE QMNPPHRTRGKIIADYFLEDSTKKTFGIFAEQMTYGVEMAEGFKDEVLAHGGKMKMYSLL ECCCCCCCCCCEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCEEEEHHC PFGFRSLKEAVDTLHLEKPEDFMGYPETKFDAIYLPLTTMESIGIALSQLHYYNFTGQIV HHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHEECCEEEEE GSGDWHDANVLNRFSDMLNGTIYAIDTYVSSADPRVYYTLEKYYNFWQSHPSTLFWHGAD CCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCCEEEEEHHHHHHHHHCCCCEEEECCCH AIDYLTETIVNKEMASPCKISEALRQAPPYKAVRTEIFFDGGNINQSMNIMQFSDGNISK HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHEEEEEEEECCCCCCCCEEEEECCCCCCC LK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA