| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193214217
Identifier: 193214217
GI number: 193214217
Start: 586746
End: 588824
Strand: Direct
Name: 193214217
Synonym: Ctha_0498
Alternate gene names: NA
Gene position: 586746-588824 (Clockwise)
Preceding gene: 193214216
Following gene: 193214219
Centisome position: 17.82
GC content: 52.57
Gene sequence:
>2079_bases GTGTCCGCTACGGTTGAGAAAAACTTTTCGGGTGTCGTAAGCGGCGTTGCTACAACGCAATACCACTGCAACATCACCGC AAAAGCCGCATCATTCAGTGACCTTGACAACAAAGCGGGTGTTTCCGAAAGCGCCGCCGACGGCTTTGATGCCGCTTCGG ACATTCCCGAACCGCCTCATGCGCCTACCGGATACGTTTCCCTTTATTTTCCTCATCCCGAATGGAATCATGCCGAATAC GAAGACTTCATGCACGACATTAGGGCAAACGGTGACCTCAGCGCGGAGGCCGAACAATGGCCGTTTGAAGTAGCAACCGA CCAAACCGGCACGGATGTCTCGCTTGCTTTTTCTCTTCACGACATTCCATCAGGCGTGGGCGTCACTTGTTTGGATAAAG ACTCCGGCACGTTGATAAACCTGCGCGACACGACCGAGTACGCTTATGCGGCGCAAAGCCTTCGCAAATTCGTCCTTTCC ATCGGCGATAGCACCAAGCCGGAGATTGCGCTTACCGCGCCAAACGGTGGAGAAACTTTTTTCCATGGCGACGCCGTGAA CATCGCGTGGCAGGCCGCCGATGCGTCGGGCTTGCTCGGGTATCGGCTTTATGCTACCCCGTTAAGCAGCGGAGAAAAAA CCTTGATTGCCGAAATGTCGGGCAGCCAAAGAACTTACGAATGGACTGTGCCGGAGGACATCACCGGCGCGGTTCGCTTG AGCATTTCGGCAACGGATTCTCTGTTCAACGAATCGGAAGTCGCGCTTGCAACCGATATTCGCATTTCCTCGTCGGAGCA TGTTTTTCTGCCGGGCTGGACGCTGATGAGTGTCCCGTTCCTTCCGGCAAATGCCTCTGCCGATTCGGTACTCGGCCAAT TCGTCCCGCAATATTACTACCTCTATAATTATCAACCGAATAGCGGATTTGCCGTCAGCGATACGGTTGAGTTTACAAAG GGCTACTGGCTTACTTCACCCGACACGGTTCGCGTCGCAATCACCGGCGAAGTGCAAGACACGGCAAGCCTCACGCTTCA AGCCGAATGGAATATCGCCGGGAATGCGCTTTATGAGTTTGTACCGAAATCCGCATTAAAAGTAGAAAAGGAAGGCCAAA CGAAAAGCTTTGACGATGCGGTGAAAGCCGGTTGGCTGAGCCCGGCGTGCTACGGCTTTTCCACCGATGCAAGCAGCTAT GTGGAAGCGGACACCTTAGAGCCATGGGCGGGCTATTGGATTGCCGCAATAGATTCAAACTTGACGCTGATTTTTGACGG CGACGAACTCGGCGGTACGGAAACGAAGGCAATGGCGACGAAAAGTTTTGCGACCTCATCGGACGCAACCGATTGGAGCG TGCAACTTGCTGTCAAGTCCGGCACGGAGGCCGATTTGATTTCCGTTTGCGGAACGGATGCAAATGCAACGGATGAATTC GATGCTTCTTTTGACCTGCCCGAGCCGCCGCTTCCACCGAAAAAGAACGGCGTTAGCTTGTACTTTTCTCACGAGAACTG GCCGGAAGTTTTGGGAGATAAATACAATGCGGATATTCGCGCACCGCTTGCCGACAAAGAAAGCAAATCATGGGAGTTTG AAGTTGAAAACGCAAACGCCGTCATGCTTTCCTGGAACGCGCCAAGCATTTCCGGTTTAAGCTTGAGACTTGAAGACCTC TCAAACGGCCAAGTTATCAATATGCTCACCGAAAATGAATACGGCTACACCGGCAGCGACGCCGAACCGGTTCGCAAGTT CAAGTTAACCGCAACTCGTGACGTGTCGGCAGTAGAAGAAACAGAAGCTGCGACGCCTTACGAATACGTGCTGGCGCAAA ACTATCCGAACCCGTTCAATCCAAGCACGACGATTCGCTTCTCATTGAAGCAAGCCGGCATGGCGACGTTCAAAGTCTTT GACATGCTGGGGCGCGAGATTCTCTCGGAGCAAATCGCCGGAAAGGCCGGATGGAATACTTACACGTTTAAAGCAAATGC GCTTTCAAGCGGGATTTATTTCTACCGACTTCAAGCCGGAGCGTTTTCCGAAACGAAGAAAATGATGCTGCTCAGATAA
Upstream 100 bases:
>100_bases GATGATGAAAAAACGCATTTACCTGATTGCGCTTTTTGCATTGCTGCAAAGCGCCCTCTTTGGAGAGGCCATGGCAAAAG CGCCTGAAACATAAACCCCT
Downstream 100 bases:
>100_bases TTTAACCTATTTAGGGGCAACTGCTTAGGGTTGCCCCGGCTATTTCAGATTCCAAACAGTAGGGGCGAACTTGTATGTTC GCCCATTTTTTTTTCCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 692; Mature: 691
Protein sequence:
>692_residues MSATVEKNFSGVVSGVATTQYHCNITAKAASFSDLDNKAGVSESAADGFDAASDIPEPPHAPTGYVSLYFPHPEWNHAEY EDFMHDIRANGDLSAEAEQWPFEVATDQTGTDVSLAFSLHDIPSGVGVTCLDKDSGTLINLRDTTEYAYAAQSLRKFVLS IGDSTKPEIALTAPNGGETFFHGDAVNIAWQAADASGLLGYRLYATPLSSGEKTLIAEMSGSQRTYEWTVPEDITGAVRL SISATDSLFNESEVALATDIRISSSEHVFLPGWTLMSVPFLPANASADSVLGQFVPQYYYLYNYQPNSGFAVSDTVEFTK GYWLTSPDTVRVAITGEVQDTASLTLQAEWNIAGNALYEFVPKSALKVEKEGQTKSFDDAVKAGWLSPACYGFSTDASSY VEADTLEPWAGYWIAAIDSNLTLIFDGDELGGTETKAMATKSFATSSDATDWSVQLAVKSGTEADLISVCGTDANATDEF DASFDLPEPPLPPKKNGVSLYFSHENWPEVLGDKYNADIRAPLADKESKSWEFEVENANAVMLSWNAPSISGLSLRLEDL SNGQVINMLTENEYGYTGSDAEPVRKFKLTATRDVSAVEETEAATPYEYVLAQNYPNPFNPSTTIRFSLKQAGMATFKVF DMLGREILSEQIAGKAGWNTYTFKANALSSGIYFYRLQAGAFSETKKMMLLR
Sequences:
>Translated_692_residues MSATVEKNFSGVVSGVATTQYHCNITAKAASFSDLDNKAGVSESAADGFDAASDIPEPPHAPTGYVSLYFPHPEWNHAEY EDFMHDIRANGDLSAEAEQWPFEVATDQTGTDVSLAFSLHDIPSGVGVTCLDKDSGTLINLRDTTEYAYAAQSLRKFVLS IGDSTKPEIALTAPNGGETFFHGDAVNIAWQAADASGLLGYRLYATPLSSGEKTLIAEMSGSQRTYEWTVPEDITGAVRL SISATDSLFNESEVALATDIRISSSEHVFLPGWTLMSVPFLPANASADSVLGQFVPQYYYLYNYQPNSGFAVSDTVEFTK GYWLTSPDTVRVAITGEVQDTASLTLQAEWNIAGNALYEFVPKSALKVEKEGQTKSFDDAVKAGWLSPACYGFSTDASSY VEADTLEPWAGYWIAAIDSNLTLIFDGDELGGTETKAMATKSFATSSDATDWSVQLAVKSGTEADLISVCGTDANATDEF DASFDLPEPPLPPKKNGVSLYFSHENWPEVLGDKYNADIRAPLADKESKSWEFEVENANAVMLSWNAPSISGLSLRLEDL SNGQVINMLTENEYGYTGSDAEPVRKFKLTATRDVSAVEETEAATPYEYVLAQNYPNPFNPSTTIRFSLKQAGMATFKVF DMLGREILSEQIAGKAGWNTYTFKANALSSGIYFYRLQAGAFSETKKMMLLR >Mature_691_residues SATVEKNFSGVVSGVATTQYHCNITAKAASFSDLDNKAGVSESAADGFDAASDIPEPPHAPTGYVSLYFPHPEWNHAEYE DFMHDIRANGDLSAEAEQWPFEVATDQTGTDVSLAFSLHDIPSGVGVTCLDKDSGTLINLRDTTEYAYAAQSLRKFVLSI GDSTKPEIALTAPNGGETFFHGDAVNIAWQAADASGLLGYRLYATPLSSGEKTLIAEMSGSQRTYEWTVPEDITGAVRLS ISATDSLFNESEVALATDIRISSSEHVFLPGWTLMSVPFLPANASADSVLGQFVPQYYYLYNYQPNSGFAVSDTVEFTKG YWLTSPDTVRVAITGEVQDTASLTLQAEWNIAGNALYEFVPKSALKVEKEGQTKSFDDAVKAGWLSPACYGFSTDASSYV EADTLEPWAGYWIAAIDSNLTLIFDGDELGGTETKAMATKSFATSSDATDWSVQLAVKSGTEADLISVCGTDANATDEFD ASFDLPEPPLPPKKNGVSLYFSHENWPEVLGDKYNADIRAPLADKESKSWEFEVENANAVMLSWNAPSISGLSLRLEDLS NGQVINMLTENEYGYTGSDAEPVRKFKLTATRDVSAVEETEAATPYEYVLAQNYPNPFNPSTTIRFSLKQAGMATFKVFD MLGREILSEQIAGKAGWNTYTFKANALSSGIYFYRLQAGAFSETKKMMLLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75191; Mature: 75060
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATVEKNFSGVVSGVATTQYHCNITAKAASFSDLDNKAGVSESAADGFDAASDIPEPPH CCCCCCCCCCHHHHCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCC APTGYVSLYFPHPEWNHAEYEDFMHDIRANGDLSAEAEQWPFEVATDQTGTDVSLAFSLH CCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCHHHCCEEEECCCCCCCEEEEEEEE DIPSGVGVTCLDKDSGTLINLRDTTEYAYAAQSLRKFVLSIGDSTKPEIALTAPNGGETF CCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEE FHGDAVNIAWQAADASGLLGYRLYATPLSSGEKTLIAEMSGSQRTYEWTVPEDITGAVRL EECCEEEEEEEECCCCCCEEEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCEEEE SISATDSLFNESEVALATDIRISSSEHVFLPGWTLMSVPFLPANASADSVLGQFVPQYYY EEECCHHHCCCCCEEEEEEEEECCCCEEEECCHHHHEECCCCCCCCHHHHHHHHCCCEEE LYNYQPNSGFAVSDTVEFTKGYWLTSPDTVRVAITGEVQDTASLTLQAEWNIAGNALYEF EEEEECCCCEEEECEEEHHCCEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHH VPKSALKVEKEGQTKSFDDAVKAGWLSPACYGFSTDASSYVEADTLEPWAGYWIAAIDSN CCCHHEEEECCCCCCCHHHHHHHCCCCCHHCCCCCCCCCCEECCCCCCCCCEEEEEECCC LTLIFDGDELGGTETKAMATKSFATSSDATDWSVQLAVKSGTEADLISVCGTDANATDEF EEEEECCCCCCCCCHHHHEECCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCC DASFDLPEPPLPPKKNGVSLYFSHENWPEVLGDKYNADIRAPLADKESKSWEFEVENANA CCCCCCCCCCCCCCCCCEEEEECCCCCHHHHCCCCCCCEECCCCCCCCCCEEEEEECCCE VMLSWNAPSISGLSLRLEDLSNGQVINMLTENEYGYTGSDAEPVRKFKLTATRDVSAVEE EEEEECCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCHHHHH TEAATPYEYVLAQNYPNPFNPSTTIRFSLKQAGMATFKVFDMLGREILSEQIAGKAGWNT HCCCCCEEEEEECCCCCCCCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCE YTFKANALSSGIYFYRLQAGAFSETKKMMLLR EEEECCCCCCCEEEEEEECCCCCCCCCEEECC >Mature Secondary Structure SATVEKNFSGVVSGVATTQYHCNITAKAASFSDLDNKAGVSESAADGFDAASDIPEPPH CCCCCCCCCHHHHCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCC APTGYVSLYFPHPEWNHAEYEDFMHDIRANGDLSAEAEQWPFEVATDQTGTDVSLAFSLH CCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCHHHCCEEEECCCCCCCEEEEEEEE DIPSGVGVTCLDKDSGTLINLRDTTEYAYAAQSLRKFVLSIGDSTKPEIALTAPNGGETF CCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEE FHGDAVNIAWQAADASGLLGYRLYATPLSSGEKTLIAEMSGSQRTYEWTVPEDITGAVRL EECCEEEEEEEECCCCCCEEEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCEEEE SISATDSLFNESEVALATDIRISSSEHVFLPGWTLMSVPFLPANASADSVLGQFVPQYYY EEECCHHHCCCCCEEEEEEEEECCCCEEEECCHHHHEECCCCCCCCHHHHHHHHCCCEEE LYNYQPNSGFAVSDTVEFTKGYWLTSPDTVRVAITGEVQDTASLTLQAEWNIAGNALYEF EEEEECCCCEEEECEEEHHCCEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHH VPKSALKVEKEGQTKSFDDAVKAGWLSPACYGFSTDASSYVEADTLEPWAGYWIAAIDSN CCCHHEEEECCCCCCCHHHHHHHCCCCCHHCCCCCCCCCCEECCCCCCCCCEEEEEECCC LTLIFDGDELGGTETKAMATKSFATSSDATDWSVQLAVKSGTEADLISVCGTDANATDEF EEEEECCCCCCCCCHHHHEECCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCC DASFDLPEPPLPPKKNGVSLYFSHENWPEVLGDKYNADIRAPLADKESKSWEFEVENANA CCCCCCCCCCCCCCCCCEEEEECCCCCHHHHCCCCCCCEECCCCCCCCCCEEEEEECCCE VMLSWNAPSISGLSLRLEDLSNGQVINMLTENEYGYTGSDAEPVRKFKLTATRDVSAVEE EEEEECCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCHHHHH TEAATPYEYVLAQNYPNPFNPSTTIRFSLKQAGMATFKVFDMLGREILSEQIAGKAGWNT HCCCCCEEEEEECCCCCCCCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCE YTFKANALSSGIYFYRLQAGAFSETKKMMLLR EEEECCCCCCCEEEEEEECCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA