| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193214214
Identifier: 193214214
GI number: 193214214
Start: 582113
End: 582925
Strand: Direct
Name: 193214214
Synonym: Ctha_0495
Alternate gene names: NA
Gene position: 582113-582925 (Clockwise)
Preceding gene: 193214213
Following gene: 193214215
Centisome position: 17.67
GC content: 44.28
Gene sequence:
>813_bases ATGAAAAAAAAGTTCTCCGCAAATGCCTTTTCTAAACTGGCGTTTCTCTGCTTGATGGTGATTTTTGCACTGCCCTACGG CGTTGCGAAAAACAATGAAAATTCTAAGACTTCCGAAAAATCTTATTCCGCCATCATAATGGAAGCGGACTCTGCATATA GCGCATTTAATTACGATTTTGCGATCGCTCGTTATGAAGCGGCTCAAAAAGACCCGGCAGCTTCGTGCGATTTATATCTC AAGTTGGCCGACGCGTATTTCTATGGTGCGTATGTAAAACCTGAAAATGAGCAAGAAGCACTTTATTTGAAAGCGGAGAA AACGCTTCGCCATGCGCTCACCATTGATTCTACAAATGCAGGGATTTATGCGCGCCTTGGACAAGTAACCGGCCAGTTGG CGCTGTTTCGTGGCGGCAAAGAAAAAGTCAAGTTGGGCTTAAAAATTAAAAGCTTGGCCGATAGCGCGCTCGCACTTGAT CCTAAAAATCCAATTGGCAATGCGGTGCTCGGCATTTGGCATTATCAACTTGCCGATTTGAGTTTTTTTGAGAAGTTTTT TGGGAAAGTTTTTTTTGGTGGCATTCCTGAAGGCAGTTACGATACATCGGCTGTTTATTTGAAAAAAGCGGTCGAGCTGG CACCGCAAATGACCTATTATCGCTACTACTACGCCAAAGCGCTCATTGAAATCGATCAGCGCAAAGAAGCCCAAAAACAG CTCGAAACCGCTTTAAGCCAACCACCTCTTGTGCTCGCCGATAAGAAAAACGAGAAACAGCTTCGCGAACTGCTGGAAGA CATCAAAGATTAA
Upstream 100 bases:
>100_bases AGTTTTATTTAGTGGTTGCCGAAAAAAGCGTGAAACTGAATTCTCAGGCTTTTGAGGCAGCCCTTTTTATTCGATACAAC CGATTAACTATCTCTGAATT
Downstream 100 bases:
>100_bases ATTGGATTTGCGCGGTTCAACCAACTTTTAGGAGCAGCATTTTCGCCAACAGCCATGCTGCTCCGTCACCGCTCCTTACG AACAGCAAATCCACCGTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MKKKFSANAFSKLAFLCLMVIFALPYGVAKNNENSKTSEKSYSAIIMEADSAYSAFNYDFAIARYEAAQKDPAASCDLYL KLADAYFYGAYVKPENEQEALYLKAEKTLRHALTIDSTNAGIYARLGQVTGQLALFRGGKEKVKLGLKIKSLADSALALD PKNPIGNAVLGIWHYQLADLSFFEKFFGKVFFGGIPEGSYDTSAVYLKKAVELAPQMTYYRYYYAKALIEIDQRKEAQKQ LETALSQPPLVLADKKNEKQLRELLEDIKD
Sequences:
>Translated_270_residues MKKKFSANAFSKLAFLCLMVIFALPYGVAKNNENSKTSEKSYSAIIMEADSAYSAFNYDFAIARYEAAQKDPAASCDLYL KLADAYFYGAYVKPENEQEALYLKAEKTLRHALTIDSTNAGIYARLGQVTGQLALFRGGKEKVKLGLKIKSLADSALALD PKNPIGNAVLGIWHYQLADLSFFEKFFGKVFFGGIPEGSYDTSAVYLKKAVELAPQMTYYRYYYAKALIEIDQRKEAQKQ LETALSQPPLVLADKKNEKQLRELLEDIKD >Mature_270_residues MKKKFSANAFSKLAFLCLMVIFALPYGVAKNNENSKTSEKSYSAIIMEADSAYSAFNYDFAIARYEAAQKDPAASCDLYL KLADAYFYGAYVKPENEQEALYLKAEKTLRHALTIDSTNAGIYARLGQVTGQLALFRGGKEKVKLGLKIKSLADSALALD PKNPIGNAVLGIWHYQLADLSFFEKFFGKVFFGGIPEGSYDTSAVYLKKAVELAPQMTYYRYYYAKALIEIDQRKEAQKQ LETALSQPPLVLADKKNEKQLRELLEDIKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30255; Mature: 30255
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKFSANAFSKLAFLCLMVIFALPYGVAKNNENSKTSEKSYSAIIMEADSAYSAFNYDF CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC AIARYEAAQKDPAASCDLYLKLADAYFYGAYVKPENEQEALYLKAEKTLRHALTIDSTNA CEEEHHHHCCCCCCCCCEEEEEEHHHHEEEEECCCCCCCEEEEEHHHHHHHHEEECCCCC GIYARLGQVTGQLALFRGGKEKVKLGLKIKSLADSALALDPKNPIGNAVLGIWHYQLADL CHHHHHHHHHCCCEEEECCHHHEEEEEEEHHHCCCCEEECCCCCCCHHHHHHHHHHHHHH SFFEKFFGKVFFGGIPEGSYDTSAVYLKKAVELAPQMTYYRYYYAKALIEIDQRKEAQKQ HHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH LETALSQPPLVLADKKNEKQLRELLEDIKD HHHHHCCCCEEEECCCCHHHHHHHHHHHCC >Mature Secondary Structure MKKKFSANAFSKLAFLCLMVIFALPYGVAKNNENSKTSEKSYSAIIMEADSAYSAFNYDF CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC AIARYEAAQKDPAASCDLYLKLADAYFYGAYVKPENEQEALYLKAEKTLRHALTIDSTNA CEEEHHHHCCCCCCCCCEEEEEEHHHHEEEEECCCCCCCEEEEEHHHHHHHHEEECCCCC GIYARLGQVTGQLALFRGGKEKVKLGLKIKSLADSALALDPKNPIGNAVLGIWHYQLADL CHHHHHHHHHCCCEEEECCHHHEEEEEEEHHHCCCCEEECCCCCCCHHHHHHHHHHHHHH SFFEKFFGKVFFGGIPEGSYDTSAVYLKKAVELAPQMTYYRYYYAKALIEIDQRKEAQKQ HHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH LETALSQPPLVLADKKNEKQLRELLEDIKD HHHHHCCCCEEEECCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA