| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193214059
Identifier: 193214059
GI number: 193214059
Start: 387181
End: 388812
Strand: Direct
Name: 193214059
Synonym: Ctha_0340
Alternate gene names: NA
Gene position: 387181-388812 (Clockwise)
Preceding gene: 193214058
Following gene: 193214061
Centisome position: 11.76
GC content: 46.32
Gene sequence:
>1632_bases ATGATGATGGTTAAGAAAGCATTTCGTCAAAAATCAATTTATTTGGAAGGAAAAGTTTTTCGCGCAGCGCTAACATTTTT AATGGCTGCGCTTTTCTTTTTTTCTCATTCAAGCGGCGCTTGCGCACAAACTTCGTCGATCGACTGGTCGCCCAATGCCA AACGACTTCTGCAAGAGGGCATGAACGAGCTTTTTAGCTACCAGCTGCAATCGGCTGAGGCAAAGTTTGATTCGCTCATT CAACTCGAGCCACAAAGGCCGGAAGGCTATTTCTACAAAAGCGACTGCTATTTGCTAACATTCATTCCCGGTGGCGAAAA CATGGCGACCTATGAACGCTTTCTTGAACTTGCCGACCAATCCGTTCGCGTTTCGGAGTTCTATCTCGAGCATCTCGCCA AAACTCCGTCAGAAAAAGCGCTTGGGCAATTCTTTTTGGCGGAGTCACACTTTGCGATCGCGGTGGCCGATGCGCGCGCC CAAAATGTGATTGGCGCAGCGCTCAACGCGCATAGCAGCAAAGGCTACTATAAAGACGCGCTGGAAACAGATTCCGCTTT TTATGACGCGGGCAAAGGCGTTGGCATGTTTTACTTTTTTAGCTCACTCATTCCTTCGTCGTTTCGTTGGCTGGCCACCA TTTTTGGCTACGAGCAAAATCGCCAAGAAGGCGTTCGCCTTATGCAACTTGCTGCGCAAAAAGGCTTTTACACCAAAAAT GAGACGCGTTTTTACCTCGCCATGTTCACTTTTCTTTTTCACCAAAATAAAATCCAAGCAGAAAAAGAATTGCTCACGCT TTTGAGCGAATATCCTCACAGCACGATTTTAAATTACGCGCTTGGCCTGATTTATCTGGATTCGAAGGAAATGGCAAACG CTGAAGCTTATTTCGTGCGCGCGGCTGGCGATTTGTCAAAAGATTCTGAAAATAGCATTTCAAAATTTGCGCTGTTTCGC TTGGCAGAGCTTCACTTTCGTTTGAACGATTTTGAAAAGGCGAAAGCGTTCCTTCTGACATTTGAGAAAAAAGCCAACTA TGCGCTCTACACGGCGCAGCTTCATTATTTGCTCGGCGTCAGTGAATGGATGCTTGGCGAAAATCAGCAGGCGAAGGAAC ATTTCGAAAAAGCCAAAGCTTCTGGCGAAAATCCCGACGAGCTTTTCATGCAACGCCGCGCTAAGTTTTTCCTTGAACAT GGTATTTCAGAAACCAGCAAAGCCATTTTGCTTGGCAAAAACGCTTTTGATTCGGGTCGCTATCCGGCGGCGCTGACTTA TCTTGAGCCGTTGCTTTCCACGCCGCTCAAAAAAGATGAACTGGCTGAAGTGCACTATTTGCTTGCAAGAATCCAAGATG AAACCGGCCAGAGCGAAAACGCGATCGCAAATTACCAAGCGTGCTACAAACTTTTTGCGCAAAAAGAACGCTACTTGGCG CCGTTCAGCCGATACTATTTGGGCAAGCTTTATGCAAAGCAAGGCCACACCAAACTTGCCTATGAGGAATTAGAAAAAAG CCTGCGCTACATCAGCTACGATTTTGAGGACATCCTGAAGGAAAAAGCGAAATACGAACTGGAAAAAATTGCTGCCGGCC AAACTGAAATTACCAATCAACCGAGTCGCTAA
Upstream 100 bases:
>100_bases TTTCGTTGTATCAACATTGAGCCATCGATTGGCGTTTTCTGCGATAGAACCGCTCGCTATATTTGCGCTCAAAACAAGCC TTTTCTATTGAACGGATCAA
Downstream 100 bases:
>100_bases GCGCTTCTCGAACGGCGCGCACCACGCTTTCCGGCGTAATTAAATTCATGCACTGAAAATGCTTTTTCGGGCATTGGCTT TTTCCAATGTGAGAGCAAGG
Product: tetratricopeptide domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 543; Mature: 543
Protein sequence:
>543_residues MMMVKKAFRQKSIYLEGKVFRAALTFLMAALFFFSHSSGACAQTSSIDWSPNAKRLLQEGMNELFSYQLQSAEAKFDSLI QLEPQRPEGYFYKSDCYLLTFIPGGENMATYERFLELADQSVRVSEFYLEHLAKTPSEKALGQFFLAESHFAIAVADARA QNVIGAALNAHSSKGYYKDALETDSAFYDAGKGVGMFYFFSSLIPSSFRWLATIFGYEQNRQEGVRLMQLAAQKGFYTKN ETRFYLAMFTFLFHQNKIQAEKELLTLLSEYPHSTILNYALGLIYLDSKEMANAEAYFVRAAGDLSKDSENSISKFALFR LAELHFRLNDFEKAKAFLLTFEKKANYALYTAQLHYLLGVSEWMLGENQQAKEHFEKAKASGENPDELFMQRRAKFFLEH GISETSKAILLGKNAFDSGRYPAALTYLEPLLSTPLKKDELAEVHYLLARIQDETGQSENAIANYQACYKLFAQKERYLA PFSRYYLGKLYAKQGHTKLAYEELEKSLRYISYDFEDILKEKAKYELEKIAAGQTEITNQPSR
Sequences:
>Translated_543_residues MMMVKKAFRQKSIYLEGKVFRAALTFLMAALFFFSHSSGACAQTSSIDWSPNAKRLLQEGMNELFSYQLQSAEAKFDSLI QLEPQRPEGYFYKSDCYLLTFIPGGENMATYERFLELADQSVRVSEFYLEHLAKTPSEKALGQFFLAESHFAIAVADARA QNVIGAALNAHSSKGYYKDALETDSAFYDAGKGVGMFYFFSSLIPSSFRWLATIFGYEQNRQEGVRLMQLAAQKGFYTKN ETRFYLAMFTFLFHQNKIQAEKELLTLLSEYPHSTILNYALGLIYLDSKEMANAEAYFVRAAGDLSKDSENSISKFALFR LAELHFRLNDFEKAKAFLLTFEKKANYALYTAQLHYLLGVSEWMLGENQQAKEHFEKAKASGENPDELFMQRRAKFFLEH GISETSKAILLGKNAFDSGRYPAALTYLEPLLSTPLKKDELAEVHYLLARIQDETGQSENAIANYQACYKLFAQKERYLA PFSRYYLGKLYAKQGHTKLAYEELEKSLRYISYDFEDILKEKAKYELEKIAAGQTEITNQPSR >Mature_543_residues MMMVKKAFRQKSIYLEGKVFRAALTFLMAALFFFSHSSGACAQTSSIDWSPNAKRLLQEGMNELFSYQLQSAEAKFDSLI QLEPQRPEGYFYKSDCYLLTFIPGGENMATYERFLELADQSVRVSEFYLEHLAKTPSEKALGQFFLAESHFAIAVADARA QNVIGAALNAHSSKGYYKDALETDSAFYDAGKGVGMFYFFSSLIPSSFRWLATIFGYEQNRQEGVRLMQLAAQKGFYTKN ETRFYLAMFTFLFHQNKIQAEKELLTLLSEYPHSTILNYALGLIYLDSKEMANAEAYFVRAAGDLSKDSENSISKFALFR LAELHFRLNDFEKAKAFLLTFEKKANYALYTAQLHYLLGVSEWMLGENQQAKEHFEKAKASGENPDELFMQRRAKFFLEH GISETSKAILLGKNAFDSGRYPAALTYLEPLLSTPLKKDELAEVHYLLARIQDETGQSENAIANYQACYKLFAQKERYLA PFSRYYLGKLYAKQGHTKLAYEELEKSLRYISYDFEDILKEKAKYELEKIAAGQTEITNQPSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62170; Mature: 62170
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMMVKKAFRQKSIYLEGKVFRAALTFLMAALFFFSHSSGACAQTSSIDWSPNAKRLLQEG CCHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH MNELFSYQLQSAEAKFDSLIQLEPQRPEGYFYKSDCYLLTFIPGGENMATYERFLELADQ HHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEECCCEEEEEECCCCCHHHHHHHHHHHCC SVRVSEFYLEHLAKTPSEKALGQFFLAESHFAIAVADARAQNVIGAALNAHSSKGYYKDA CHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCCCCHHHH LETDSAFYDAGKGVGMFYFFSSLIPSSFRWLATIFGYEQNRQEGVRLMQLAAQKGFYTKN HHCCHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC ETRFYLAMFTFLFHQNKIQAEKELLTLLSEYPHSTILNYALGLIYLDSKEMANAEAYFVR CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCHHHCCCCEEEEE AAGDLSKDSENSISKFALFRLAELHFRLNDFEKAKAFLLTFEKKANYALYTAQLHYLLGV ECCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHEEEECCCCEEEEHHHHHHHHHH SEWMLGENQQAKEHFEKAKASGENPDELFMQRRAKFFLEHGISETSKAILLGKNAFDSGR HHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC YPAALTYLEPLLSTPLKKDELAEVHYLLARIQDETGQSENAIANYQACYKLFAQKERYLA CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC PFSRYYLGKLYAKQGHTKLAYEELEKSLRYISYDFEDILKEKAKYELEKIAAGQTEITNQ HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC PSR CCC >Mature Secondary Structure MMMVKKAFRQKSIYLEGKVFRAALTFLMAALFFFSHSSGACAQTSSIDWSPNAKRLLQEG CCHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH MNELFSYQLQSAEAKFDSLIQLEPQRPEGYFYKSDCYLLTFIPGGENMATYERFLELADQ HHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEECCCEEEEEECCCCCHHHHHHHHHHHCC SVRVSEFYLEHLAKTPSEKALGQFFLAESHFAIAVADARAQNVIGAALNAHSSKGYYKDA CHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCCCCHHHH LETDSAFYDAGKGVGMFYFFSSLIPSSFRWLATIFGYEQNRQEGVRLMQLAAQKGFYTKN HHCCHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC ETRFYLAMFTFLFHQNKIQAEKELLTLLSEYPHSTILNYALGLIYLDSKEMANAEAYFVR CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCHHHCCCCEEEEE AAGDLSKDSENSISKFALFRLAELHFRLNDFEKAKAFLLTFEKKANYALYTAQLHYLLGV ECCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHEEEECCCCEEEEHHHHHHHHHH SEWMLGENQQAKEHFEKAKASGENPDELFMQRRAKFFLEHGISETSKAILLGKNAFDSGR HHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC YPAALTYLEPLLSTPLKKDELAEVHYLLARIQDETGQSENAIANYQACYKLFAQKERYLA CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC PFSRYYLGKLYAKQGHTKLAYEELEKSLRYISYDFEDILKEKAKYELEKIAAGQTEITNQ HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC PSR CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA