Definition Chloroherpeton thalassium ATCC 35110 chromosome, complete genome.
Accession NC_011026
Length 3,293,456

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The map label for this gene is 193214059

Identifier: 193214059

GI number: 193214059

Start: 387181

End: 388812

Strand: Direct

Name: 193214059

Synonym: Ctha_0340

Alternate gene names: NA

Gene position: 387181-388812 (Clockwise)

Preceding gene: 193214058

Following gene: 193214061

Centisome position: 11.76

GC content: 46.32

Gene sequence:

>1632_bases
ATGATGATGGTTAAGAAAGCATTTCGTCAAAAATCAATTTATTTGGAAGGAAAAGTTTTTCGCGCAGCGCTAACATTTTT
AATGGCTGCGCTTTTCTTTTTTTCTCATTCAAGCGGCGCTTGCGCACAAACTTCGTCGATCGACTGGTCGCCCAATGCCA
AACGACTTCTGCAAGAGGGCATGAACGAGCTTTTTAGCTACCAGCTGCAATCGGCTGAGGCAAAGTTTGATTCGCTCATT
CAACTCGAGCCACAAAGGCCGGAAGGCTATTTCTACAAAAGCGACTGCTATTTGCTAACATTCATTCCCGGTGGCGAAAA
CATGGCGACCTATGAACGCTTTCTTGAACTTGCCGACCAATCCGTTCGCGTTTCGGAGTTCTATCTCGAGCATCTCGCCA
AAACTCCGTCAGAAAAAGCGCTTGGGCAATTCTTTTTGGCGGAGTCACACTTTGCGATCGCGGTGGCCGATGCGCGCGCC
CAAAATGTGATTGGCGCAGCGCTCAACGCGCATAGCAGCAAAGGCTACTATAAAGACGCGCTGGAAACAGATTCCGCTTT
TTATGACGCGGGCAAAGGCGTTGGCATGTTTTACTTTTTTAGCTCACTCATTCCTTCGTCGTTTCGTTGGCTGGCCACCA
TTTTTGGCTACGAGCAAAATCGCCAAGAAGGCGTTCGCCTTATGCAACTTGCTGCGCAAAAAGGCTTTTACACCAAAAAT
GAGACGCGTTTTTACCTCGCCATGTTCACTTTTCTTTTTCACCAAAATAAAATCCAAGCAGAAAAAGAATTGCTCACGCT
TTTGAGCGAATATCCTCACAGCACGATTTTAAATTACGCGCTTGGCCTGATTTATCTGGATTCGAAGGAAATGGCAAACG
CTGAAGCTTATTTCGTGCGCGCGGCTGGCGATTTGTCAAAAGATTCTGAAAATAGCATTTCAAAATTTGCGCTGTTTCGC
TTGGCAGAGCTTCACTTTCGTTTGAACGATTTTGAAAAGGCGAAAGCGTTCCTTCTGACATTTGAGAAAAAAGCCAACTA
TGCGCTCTACACGGCGCAGCTTCATTATTTGCTCGGCGTCAGTGAATGGATGCTTGGCGAAAATCAGCAGGCGAAGGAAC
ATTTCGAAAAAGCCAAAGCTTCTGGCGAAAATCCCGACGAGCTTTTCATGCAACGCCGCGCTAAGTTTTTCCTTGAACAT
GGTATTTCAGAAACCAGCAAAGCCATTTTGCTTGGCAAAAACGCTTTTGATTCGGGTCGCTATCCGGCGGCGCTGACTTA
TCTTGAGCCGTTGCTTTCCACGCCGCTCAAAAAAGATGAACTGGCTGAAGTGCACTATTTGCTTGCAAGAATCCAAGATG
AAACCGGCCAGAGCGAAAACGCGATCGCAAATTACCAAGCGTGCTACAAACTTTTTGCGCAAAAAGAACGCTACTTGGCG
CCGTTCAGCCGATACTATTTGGGCAAGCTTTATGCAAAGCAAGGCCACACCAAACTTGCCTATGAGGAATTAGAAAAAAG
CCTGCGCTACATCAGCTACGATTTTGAGGACATCCTGAAGGAAAAAGCGAAATACGAACTGGAAAAAATTGCTGCCGGCC
AAACTGAAATTACCAATCAACCGAGTCGCTAA

Upstream 100 bases:

>100_bases
TTTCGTTGTATCAACATTGAGCCATCGATTGGCGTTTTCTGCGATAGAACCGCTCGCTATATTTGCGCTCAAAACAAGCC
TTTTCTATTGAACGGATCAA

Downstream 100 bases:

>100_bases
GCGCTTCTCGAACGGCGCGCACCACGCTTTCCGGCGTAATTAAATTCATGCACTGAAAATGCTTTTTCGGGCATTGGCTT
TTTCCAATGTGAGAGCAAGG

Product: tetratricopeptide domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 543; Mature: 543

Protein sequence:

>543_residues
MMMVKKAFRQKSIYLEGKVFRAALTFLMAALFFFSHSSGACAQTSSIDWSPNAKRLLQEGMNELFSYQLQSAEAKFDSLI
QLEPQRPEGYFYKSDCYLLTFIPGGENMATYERFLELADQSVRVSEFYLEHLAKTPSEKALGQFFLAESHFAIAVADARA
QNVIGAALNAHSSKGYYKDALETDSAFYDAGKGVGMFYFFSSLIPSSFRWLATIFGYEQNRQEGVRLMQLAAQKGFYTKN
ETRFYLAMFTFLFHQNKIQAEKELLTLLSEYPHSTILNYALGLIYLDSKEMANAEAYFVRAAGDLSKDSENSISKFALFR
LAELHFRLNDFEKAKAFLLTFEKKANYALYTAQLHYLLGVSEWMLGENQQAKEHFEKAKASGENPDELFMQRRAKFFLEH
GISETSKAILLGKNAFDSGRYPAALTYLEPLLSTPLKKDELAEVHYLLARIQDETGQSENAIANYQACYKLFAQKERYLA
PFSRYYLGKLYAKQGHTKLAYEELEKSLRYISYDFEDILKEKAKYELEKIAAGQTEITNQPSR

Sequences:

>Translated_543_residues
MMMVKKAFRQKSIYLEGKVFRAALTFLMAALFFFSHSSGACAQTSSIDWSPNAKRLLQEGMNELFSYQLQSAEAKFDSLI
QLEPQRPEGYFYKSDCYLLTFIPGGENMATYERFLELADQSVRVSEFYLEHLAKTPSEKALGQFFLAESHFAIAVADARA
QNVIGAALNAHSSKGYYKDALETDSAFYDAGKGVGMFYFFSSLIPSSFRWLATIFGYEQNRQEGVRLMQLAAQKGFYTKN
ETRFYLAMFTFLFHQNKIQAEKELLTLLSEYPHSTILNYALGLIYLDSKEMANAEAYFVRAAGDLSKDSENSISKFALFR
LAELHFRLNDFEKAKAFLLTFEKKANYALYTAQLHYLLGVSEWMLGENQQAKEHFEKAKASGENPDELFMQRRAKFFLEH
GISETSKAILLGKNAFDSGRYPAALTYLEPLLSTPLKKDELAEVHYLLARIQDETGQSENAIANYQACYKLFAQKERYLA
PFSRYYLGKLYAKQGHTKLAYEELEKSLRYISYDFEDILKEKAKYELEKIAAGQTEITNQPSR
>Mature_543_residues
MMMVKKAFRQKSIYLEGKVFRAALTFLMAALFFFSHSSGACAQTSSIDWSPNAKRLLQEGMNELFSYQLQSAEAKFDSLI
QLEPQRPEGYFYKSDCYLLTFIPGGENMATYERFLELADQSVRVSEFYLEHLAKTPSEKALGQFFLAESHFAIAVADARA
QNVIGAALNAHSSKGYYKDALETDSAFYDAGKGVGMFYFFSSLIPSSFRWLATIFGYEQNRQEGVRLMQLAAQKGFYTKN
ETRFYLAMFTFLFHQNKIQAEKELLTLLSEYPHSTILNYALGLIYLDSKEMANAEAYFVRAAGDLSKDSENSISKFALFR
LAELHFRLNDFEKAKAFLLTFEKKANYALYTAQLHYLLGVSEWMLGENQQAKEHFEKAKASGENPDELFMQRRAKFFLEH
GISETSKAILLGKNAFDSGRYPAALTYLEPLLSTPLKKDELAEVHYLLARIQDETGQSENAIANYQACYKLFAQKERYLA
PFSRYYLGKLYAKQGHTKLAYEELEKSLRYISYDFEDILKEKAKYELEKIAAGQTEITNQPSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62170; Mature: 62170

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMMVKKAFRQKSIYLEGKVFRAALTFLMAALFFFSHSSGACAQTSSIDWSPNAKRLLQEG
CCHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
MNELFSYQLQSAEAKFDSLIQLEPQRPEGYFYKSDCYLLTFIPGGENMATYERFLELADQ
HHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEECCCEEEEEECCCCCHHHHHHHHHHHCC
SVRVSEFYLEHLAKTPSEKALGQFFLAESHFAIAVADARAQNVIGAALNAHSSKGYYKDA
CHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCCCCHHHH
LETDSAFYDAGKGVGMFYFFSSLIPSSFRWLATIFGYEQNRQEGVRLMQLAAQKGFYTKN
HHCCHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC
ETRFYLAMFTFLFHQNKIQAEKELLTLLSEYPHSTILNYALGLIYLDSKEMANAEAYFVR
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCHHHCCCCEEEEE
AAGDLSKDSENSISKFALFRLAELHFRLNDFEKAKAFLLTFEKKANYALYTAQLHYLLGV
ECCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHEEEECCCCEEEEHHHHHHHHHH
SEWMLGENQQAKEHFEKAKASGENPDELFMQRRAKFFLEHGISETSKAILLGKNAFDSGR
HHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC
YPAALTYLEPLLSTPLKKDELAEVHYLLARIQDETGQSENAIANYQACYKLFAQKERYLA
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC
PFSRYYLGKLYAKQGHTKLAYEELEKSLRYISYDFEDILKEKAKYELEKIAAGQTEITNQ
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
PSR
CCC
>Mature Secondary Structure
MMMVKKAFRQKSIYLEGKVFRAALTFLMAALFFFSHSSGACAQTSSIDWSPNAKRLLQEG
CCHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
MNELFSYQLQSAEAKFDSLIQLEPQRPEGYFYKSDCYLLTFIPGGENMATYERFLELADQ
HHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEECCCEEEEEECCCCCHHHHHHHHHHHCC
SVRVSEFYLEHLAKTPSEKALGQFFLAESHFAIAVADARAQNVIGAALNAHSSKGYYKDA
CHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCCCCHHHH
LETDSAFYDAGKGVGMFYFFSSLIPSSFRWLATIFGYEQNRQEGVRLMQLAAQKGFYTKN
HHCCHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC
ETRFYLAMFTFLFHQNKIQAEKELLTLLSEYPHSTILNYALGLIYLDSKEMANAEAYFVR
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCHHHCCCCEEEEE
AAGDLSKDSENSISKFALFRLAELHFRLNDFEKAKAFLLTFEKKANYALYTAQLHYLLGV
ECCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHEEEECCCCEEEEHHHHHHHHHH
SEWMLGENQQAKEHFEKAKASGENPDELFMQRRAKFFLEHGISETSKAILLGKNAFDSGR
HHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC
YPAALTYLEPLLSTPLKKDELAEVHYLLARIQDETGQSENAIANYQACYKLFAQKERYLA
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC
PFSRYYLGKLYAKQGHTKLAYEELEKSLRYISYDFEDILKEKAKYELEKIAAGQTEITNQ
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
PSR
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA