| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is apaG [H]
Identifier: 193214058
GI number: 193214058
Start: 386557
End: 386985
Strand: Direct
Name: apaG [H]
Synonym: Ctha_0339
Alternate gene names: 193214058
Gene position: 386557-386985 (Clockwise)
Preceding gene: 193214053
Following gene: 193214059
Centisome position: 11.74
GC content: 42.89
Gene sequence:
>429_bases ATGACAAGCGACATTTGTACGGTTAGCATCGACAGTCTTGAAGATATCAGCCAGCGCAAGCTTCAGCCGCCTTATAAGTA TGCTCATGCCTACACGATTACCATTCACAATATTTCAACCTACACTGTTCAAATCAAATCCAGAATGTGGATCGTTAAAG ATGGCGACATGAAAGACAGAGTGGTTGAAGGCGATGGCATTGTTGGGCACAAACCCATTTTGATGCCTGGCGATACATTT ACTTATACCAGCTATCATGTTATGCTAAACCGTTTTGGCAGCGCTCTTGGAAAATATTTTGGCACGTATGCGTATGTCCC TGAATTTGAACAGGAATCGCTCTTTGATGATGACGAGTTTGAAGGAGATGAGTTTGAAGTAAACATTCCAGAAATTCAAC TGATCCACAAACTGAGGCCAGGCGCATAG
Upstream 100 bases:
>100_bases TTTCGATGCAAAATGAATTTCAGAAAAACTATTGCTGTTTAGGGTCTTAGTTTTTCAGTACAACGTTTTTTGATTTTTGC AATAGAAACCTGAGGGAATT
Downstream 100 bases:
>100_bases CCAAGCCTTATCCACAAAATAGCCGCTCAAATAAACGATGAGCGGCTGCTTTCCGAACCCGCTTGACCCACTTAGCACTT CCGTGAAATAGAAAATTTCG
Product: ApaG domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MTSDICTVSIDSLEDISQRKLQPPYKYAHAYTITIHNISTYTVQIKSRMWIVKDGDMKDRVVEGDGIVGHKPILMPGDTF TYTSYHVMLNRFGSALGKYFGTYAYVPEFEQESLFDDDEFEGDEFEVNIPEIQLIHKLRPGA
Sequences:
>Translated_142_residues MTSDICTVSIDSLEDISQRKLQPPYKYAHAYTITIHNISTYTVQIKSRMWIVKDGDMKDRVVEGDGIVGHKPILMPGDTF TYTSYHVMLNRFGSALGKYFGTYAYVPEFEQESLFDDDEFEGDEFEVNIPEIQLIHKLRPGA >Mature_141_residues TSDICTVSIDSLEDISQRKLQPPYKYAHAYTITIHNISTYTVQIKSRMWIVKDGDMKDRVVEGDGIVGHKPILMPGDTFT YTSYHVMLNRFGSALGKYFGTYAYVPEFEQESLFDDDEFEGDEFEVNIPEIQLIHKLRPGA
Specific function: Unknown
COG id: COG2967
COG function: function code P; Uncharacterized protein affecting Mg2+/Co2+ transport
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 apaG domain [H]
Homologues:
Organism=Escherichia coli, GI1786235, Length=74, Percent_Identity=35.1351351351351, Blast_Score=66, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007474 - InterPro: IPR023065 [H]
Pfam domain/function: PF04379 DUF525 [H]
EC number: NA
Molecular weight: Translated: 16279; Mature: 16147
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: PS51087 APAG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSDICTVSIDSLEDISQRKLQPPYKYAHAYTITIHNISTYTVQIKSRMWIVKDGDMKDR CCCCEEEEECCCHHHHHHHHCCCCCHHEEEEEEEEECCEEEEEEEECEEEEEECCCCCCE VVEGDGIVGHKPILMPGDTFTYTSYHVMLNRFGSALGKYFGTYAYVPEFEQESLFDDDEF EECCCCCCCCCCEEECCCCEEEHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCC EGDEFEVNIPEIQLIHKLRPGA CCCEEEEECCCEEEEECCCCCC >Mature Secondary Structure TSDICTVSIDSLEDISQRKLQPPYKYAHAYTITIHNISTYTVQIKSRMWIVKDGDMKDR CCCEEEEECCCHHHHHHHHCCCCCHHEEEEEEEEECCEEEEEEEECEEEEEECCCCCCE VVEGDGIVGHKPILMPGDTFTYTSYHVMLNRFGSALGKYFGTYAYVPEFEQESLFDDDEF EECCCCCCCCCCEEECCCCEEEHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCC EGDEFEVNIPEIQLIHKLRPGA CCCEEEEECCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA