| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
Click here to switch to the map view.
The map label for this gene is 193214024
Identifier: 193214024
GI number: 193214024
Start: 349155
End: 350084
Strand: Direct
Name: 193214024
Synonym: Ctha_0305
Alternate gene names: NA
Gene position: 349155-350084 (Clockwise)
Preceding gene: 193214021
Following gene: 193214026
Centisome position: 10.6
GC content: 48.92
Gene sequence:
>930_bases ATGAAACGTGATTTATTCATGACTCTTCTTACTTTTCTCGTGCTGGGCGCATTTTCAATCGCAGGCTGCGACGACGACAA TCCTATCGTGGAAACGGATTACAGCAGCGAGTATAGCGAATACGCTGCAAACGATATTGCCAGCACAATGGGCAGCGACA ATGGCGGCCTAAATGACCAATTTACCGACCTTGCCAATTTGGTAGTCGACTCGCTCGACATGGCTGAAACTGCCGCCAGC GATACCATTGTGATATCAAGAGAGCGAAGCGGCCCTTACTACAACAATGGCCAATGGACGCTGAAATTATCCAGCCAGGC ATCTTCGAGCTCGCTTACTGGAAGCTGGTCTCGCGGATATCGATACTGGTACAGCAAAAACACACAACGCCAAAAGCACT TTTTCCAAAAAGGCTCGGGCATTGCCGACTCTATTGGATTTGGCCTCATATCCGATAGCTGCAGCGGTAGCTACGAAAAC GCTTATCGCACCCACACGCTCAATCAGCTTCAAGCGGAATGGGCGTGCCGTGTAGATTCGGCCAGCAACATGATTCGGCT GGGCTCAACCCAAAACTACACGTGCCAGTCGACCGATGAAGTGAAACTCGGGCAAAATACGCGGGTTTCAACTTACACCT TAACCTTATCCATGTCTGATATAGAAATTCCAATAAAAGAGCGCTTTATTCGTGGAAAATATGTTCATCCTCGTTCAGGA ACCATTACGGGCACACATGTCGCTTCGCATAAAATGCTTAGCTCAACTGGCACGGCCTTGTGGGAGCGCTCCGGCATAGA GCGTTCGTTTGAAATCACTTATTCTTACAACGCCAGCACACAAACGCGCACGGTTACCGTTACCGTTGCAGGGCCCATTT CCAGCCTAACCAAAACACTGAACATCGAAACTGGAACCGTAGAAGATTAA
Upstream 100 bases:
>100_bases TATCTTATTTGAACTTCAATGATTTTCCCCCGCTTGGCTGCTTGCTTTTACGATTGCTCATCGGAACAGCGAGCCTTTTC TAACTTAAACAAGAACCGTG
Downstream 100 bases:
>100_bases GCCGATTCTAACGAAGCAATAAGAAGCCGCCCAAAAATCATGGAAAGATTTCAGGGCGGCTTTTTCTTTTAATTTTTATC GTGCGGCGAATCCCGCCACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MKRDLFMTLLTFLVLGAFSIAGCDDDNPIVETDYSSEYSEYAANDIASTMGSDNGGLNDQFTDLANLVVDSLDMAETAAS DTIVISRERSGPYYNNGQWTLKLSSQASSSSLTGSWSRGYRYWYSKNTQRQKHFFQKGSGIADSIGFGLISDSCSGSYEN AYRTHTLNQLQAEWACRVDSASNMIRLGSTQNYTCQSTDEVKLGQNTRVSTYTLTLSMSDIEIPIKERFIRGKYVHPRSG TITGTHVASHKMLSSTGTALWERSGIERSFEITYSYNASTQTRTVTVTVAGPISSLTKTLNIETGTVED
Sequences:
>Translated_309_residues MKRDLFMTLLTFLVLGAFSIAGCDDDNPIVETDYSSEYSEYAANDIASTMGSDNGGLNDQFTDLANLVVDSLDMAETAAS DTIVISRERSGPYYNNGQWTLKLSSQASSSSLTGSWSRGYRYWYSKNTQRQKHFFQKGSGIADSIGFGLISDSCSGSYEN AYRTHTLNQLQAEWACRVDSASNMIRLGSTQNYTCQSTDEVKLGQNTRVSTYTLTLSMSDIEIPIKERFIRGKYVHPRSG TITGTHVASHKMLSSTGTALWERSGIERSFEITYSYNASTQTRTVTVTVAGPISSLTKTLNIETGTVED >Mature_309_residues MKRDLFMTLLTFLVLGAFSIAGCDDDNPIVETDYSSEYSEYAANDIASTMGSDNGGLNDQFTDLANLVVDSLDMAETAAS DTIVISRERSGPYYNNGQWTLKLSSQASSSSLTGSWSRGYRYWYSKNTQRQKHFFQKGSGIADSIGFGLISDSCSGSYEN AYRTHTLNQLQAEWACRVDSASNMIRLGSTQNYTCQSTDEVKLGQNTRVSTYTLTLSMSDIEIPIKERFIRGKYVHPRSG TITGTHVASHKMLSSTGTALWERSGIERSFEITYSYNASTQTRTVTVTVAGPISSLTKTLNIETGTVED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34047; Mature: 34047
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRDLFMTLLTFLVLGAFSIAGCDDDNPIVETDYSSEYSEYAANDIASTMGSDNGGLNDQ CCHHHHHHHHHHHHHHHHEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHH FTDLANLVVDSLDMAETAASDTIVISRERSGPYYNNGQWTLKLSSQASSSSLTGSWSRGY HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCEEEEEECCCCCCCCCCCCHHHCE RYWYSKNTQRQKHFFQKGSGIADSIGFGLISDSCSGSYENAYRTHTLNQLQAEWACRVDS EEEECCCCHHHHHHHHCCCCCHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHEEEECC ASNMIRLGSTQNYTCQSTDEVKLGQNTRVSTYTLTLSMSDIEIPIKERFIRGKYVHPRSG CCCEEEECCCCCCEECCCCCEECCCCCEEEEEEEEEEECCCCCCHHHHHHCCCEECCCCC TITGTHVASHKMLSSTGTALWERSGIERSFEITYSYNASTQTRTVTVTVAGPISSLTKTL CEEECHHHHHHHHHHCCHHHHHHCCCCEEEEEEEEECCCCCEEEEEEEECCCHHHHHHEE NIETGTVED ECCCCCCCC >Mature Secondary Structure MKRDLFMTLLTFLVLGAFSIAGCDDDNPIVETDYSSEYSEYAANDIASTMGSDNGGLNDQ CCHHHHHHHHHHHHHHHHEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHH FTDLANLVVDSLDMAETAASDTIVISRERSGPYYNNGQWTLKLSSQASSSSLTGSWSRGY HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCEEEEEECCCCCCCCCCCCHHHCE RYWYSKNTQRQKHFFQKGSGIADSIGFGLISDSCSGSYENAYRTHTLNQLQAEWACRVDS EEEECCCCHHHHHHHHCCCCCHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHEEEECC ASNMIRLGSTQNYTCQSTDEVKLGQNTRVSTYTLTLSMSDIEIPIKERFIRGKYVHPRSG CCCEEEECCCCCCEECCCCCEECCCCCEEEEEEEEEEECCCCCCHHHHHHCCCEECCCCC TITGTHVASHKMLSSTGTALWERSGIERSFEITYSYNASTQTRTVTVTVAGPISSLTKTL CEEECHHHHHHHHHHCCHHHHHHCCCCEEEEEEEEECCCCCEEEEEEEECCCHHHHHHEE NIETGTVED ECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA