Definition Chloroherpeton thalassium ATCC 35110 chromosome, complete genome.
Accession NC_011026
Length 3,293,456

Click here to switch to the map view.

The map label for this gene is 193214021

Identifier: 193214021

GI number: 193214021

Start: 345243

End: 345704

Strand: Direct

Name: 193214021

Synonym: Ctha_0302

Alternate gene names: NA

Gene position: 345243-345704 (Clockwise)

Preceding gene: 193214020

Following gene: 193214024

Centisome position: 10.48

GC content: 44.37

Gene sequence:

>462_bases
ATGCACACGCTTTCTTTTTCAGTCGATATTGCAGCTCCTTGCGATGCGGTGTTTCACTTTCATGACGATGTGGAAAATCT
TAAGCAAATTACTCCGCCAGAAGCTGATCTAAAAATTCTTTATGCCGATGATCCGGGCAAAGGGCAAAAGGTGGTTCTAA
GCATCGCACAATTTGGATTTCTACACATGAAATGGGAAGTCCTTATCACAGATTATGAACCGCCTTTTCGCATGACCGAC
GAGCAAATCAAGGGACCTTTTCACAGTTGGCGGCAAACGCGCTCGTTTCAATCGCTTTCCAACGCACACACGCGGCTCAC
CGACGCAGTTGTTTATGAGTTGCCGTTGCAGTTTTTCAGCGACTTTTTCTTCGGTGCGCTTGTTGAACAGCAAATCACGG
AACAATTCAAATATCGGCAGGCAAAATTGAAAGCTATTTTGGAAAATCAATTTCACAGCTAA

Upstream 100 bases:

>100_bases
AATTTGGCTGCACTACGAAGCAAACGACACCTGGCAGTGCCTGAACTTAGAAGAGTTTAATCGGATTTTTACCCGCAGAA
ATTAAGTCGAACGGGCCTAC

Downstream 100 bases:

>100_bases
AAAATCGCCTTGCAACGATTTCTGATTTTTATGATTTAGCCAAAGGAAAGACACAAGGTCTTGTGCCTTTCCTTGCAAAT
TAATAATTCCAAAATTCTCT

Product: cyclase/dehydrase

Products: NA

Alternate protein names: Inhibitor SulA; NAD-Dependent Epimerase/Dehydratase; Inhibitor; Inhibitor SULA; Nucleoside-Diphosphate Sugar Epimerase

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MHTLSFSVDIAAPCDAVFHFHDDVENLKQITPPEADLKILYADDPGKGQKVVLSIAQFGFLHMKWEVLITDYEPPFRMTD
EQIKGPFHSWRQTRSFQSLSNAHTRLTDAVVYELPLQFFSDFFFGALVEQQITEQFKYRQAKLKAILENQFHS

Sequences:

>Translated_153_residues
MHTLSFSVDIAAPCDAVFHFHDDVENLKQITPPEADLKILYADDPGKGQKVVLSIAQFGFLHMKWEVLITDYEPPFRMTD
EQIKGPFHSWRQTRSFQSLSNAHTRLTDAVVYELPLQFFSDFFFGALVEQQITEQFKYRQAKLKAILENQFHS
>Mature_153_residues
MHTLSFSVDIAAPCDAVFHFHDDVENLKQITPPEADLKILYADDPGKGQKVVLSIAQFGFLHMKWEVLITDYEPPFRMTD
EQIKGPFHSWRQTRSFQSLSNAHTRLTDAVVYELPLQFFSDFFFGALVEQQITEQFKYRQAKLKAILENQFHS

Specific function: Unknown

COG id: COG4276

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17768; Mature: 17768

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTLSFSVDIAAPCDAVFHFHDDVENLKQITPPEADLKILYADDPGKGQKVVLSIAQFGF
CCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH
LHMKWEVLITDYEPPFRMTDEQIKGPFHSWRQTRSFQSLSNAHTRLTDAVVYELPLQFFS
HEEEEEEEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFFFGALVEQQITEQFKYRQAKLKAILENQFHS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MHTLSFSVDIAAPCDAVFHFHDDVENLKQITPPEADLKILYADDPGKGQKVVLSIAQFGF
CCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH
LHMKWEVLITDYEPPFRMTDEQIKGPFHSWRQTRSFQSLSNAHTRLTDAVVYELPLQFFS
HEEEEEEEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFFFGALVEQQITEQFKYRQAKLKAILENQFHS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA