| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
Click here to switch to the map view.
The map label for this gene is feoB1 [H]
Identifier: 193213892
GI number: 193213892
Start: 201435
End: 203930
Strand: Direct
Name: feoB1 [H]
Synonym: Ctha_0173
Alternate gene names: 193213892
Gene position: 201435-203930 (Clockwise)
Preceding gene: 193213891
Following gene: 193213898
Centisome position: 6.12
GC content: 45.39
Gene sequence:
>2496_bases ATGAATCTCGCTGAGTTGCACGCTGGGCAAAATGGATTTATCACGAAAGTAAAAGGGCGTGGCGCCTTTAGAAAACGAAT TAGTGAAATGGGATTTGTGAGGGGCAAGCAAATTACAAGAATTAAAGATGCGCCGCTCAAAGATCCAATAGAGTTTAAAT TGATGGGCTTCAATGTGTCGCTGCGCAAAAGCGAAGCTGAGCAAATTGAAGTTGTTACAGAATCCGAAGCCGTTTCGCTA AACGGAAACGCGCATAGCAATGGCACTCCAGTAGAACACTTTTTTGAAAAGAAAATCAAGGAAGCTTCCAAGCAGATCAA TGTGGTGCTTGTTGGCAACCCAAACTCAGGAAAAACGTCGCTGTTTAATTATGCGTCTGGCTCAAACGAACGAACCGGAA ATTACAGCGGTGTAACCATCAGTCCACATGAAAGCCTTGTATCGCTAAACGGCTATCGCATCAATATTGTCGATTTGCCA GGGACGTATTCACTTTCGGCCTACACACCTGAAGAAACATTTGTTCGCCGCTATATCATCGATAAGCAACCCGATGTGGT GATAAATATCGTTGATGCGTCCAACCTCGAAAGAAACCTTTACCTCACCACGCAGCTCATCGATATGGACATCAAAGTGG TTATGGCACTGAACATGTACGACGAGCTGACAACCAAAGGCGATACCTTACACATCGAGCAGCTTGGCGAGCTTTTGGGC ATTCCCATTGTGCCCACTATTGCTTCAAAAGGAAAAGGCATCAAGCAGCTTTTTGATCATGTCATTCAAATTCACGAGGA AACAGAGCCGACCTATCGCCACATTCACATCCAGTACGGCGACGACATCGAGAAATCGCTGCATAGCTTGCAAGAGCTTA TTTGGAAAAATAAGCACATTACCGACAAAGCCTCTTCGCGCCTTTTGGCCGTTCAACTTTTGGAAAAAGACAAAAGCATC GACAGCTTTCTGTCGCAATTTTCAGAATATGAGACGATCAAGACAAAAGCGGATCATGAAATTGCCTCGCTCGAAAAGCA ATTCCATGAAGAAAGTTCTTCATTAATTTCGGAAGCGCGATATGGGTTTATTGCGGGCGCGTTGAAAGAAACTTACCAGA AAAAAGAGGACATTCAATTATCCAGATCGGATAAAATAGACAACCTTCTCACGCATCGAATTTACGGCTATCCCATCTTT CTCTTTTTTCTTTGGATTGTTTTCCAAGCGACTTTTTCGCTGGGACAATATCCGGTAGAATGGCTGGAATTCTTGGTTGG CGAAATCTCTTCCTTTTTTTCCAGTATTTTGCCCGCCGGCTTTTTCAAAGATCTCGTTGTAAGCGGCATTATCGACGGAA CAGGAAGCGTTCTTGTCTTTTTGCCCAACATCGTCATCTTGTTTCTCTTCATATCGATTATGGAAGATACGGGCTACATG GCTCGCGTGGCGTTTATCATGGATAAGCTCATGCACCGGCTTGGGCTGCATGGAAAATCATTTATCCCGCTGATCATTGG CTTTGGCTGCAATGTGCCGGCAATTATGGCCACGCGCACGATTGAAAATCCAAAAGATCGTCTGCTGACCATGCTTATTG TGCCGTTTATGTCGTGCTCAGCGCGCTTGCCCGTTTATATTTTGCTGATCAGCGCGTTTTTCCCGGAGCATCCCGTAACG ATTCTCTTTTCGCTTTACCTGATTGGCATTTTGCTCTCCATGCTGTTCTCATTTGTTTTCAACAAAATCATTTTCAAAAC CGGCCAAACGCCGTTTGTCATGGAACTGCCGCCGTACCGCGTTCCCACGCTGCAATCGGTGATCAAGCATGTTTGGTTTC GGGCGTATTTGTATCTGAAAAAAGTCGGCGGCGTGATTCTCATCGCATCGGTTGTTGTATGGATGCTTCAATATTTTCCG CGCCAACCCGAACTTGACCAACAATTAGAACAAGATGCGGCGCGTGTCTCGCAAACTTATGAGACCAAAATCCAGGCTGC GTCAACCGATGAAATCAAAACACAGTTGAAAACAGCGCTTTCCGAAAAAATAGCGGACATGGAATTTGCTACGGAAATGA CGCGTACCGAACGCTCGTATCTTGGCCAATTTGGAAAAACGCTTGAGCCAGTATTTCGTCCGCTGGGATTCGATTGGAAA ATTAGCGTGAGCTTGCTTTCAGGAATTGCCGCCAAAGAAATTGTGCTGAGCACAATGGGCGTGCTGTTTCAAACCGCCAA TGTTGAAGAAGATGCGCATAAATTGGAAGAAGGATTAAGCCTGCATTTTGCTTCGCTCAATAGCGCGCCGCCATTTTTGA CCGCGCTTAGCTTGCTTCTTTTCATTCTGATTTATTTTCCATGTCTCGGCGTGGTCGTCGCCGTTGGGAAAGAGTCTGGA AGTTGGAAATGGGCAGTTTTTGTTGTGTCTTACACATCGCTGCTGGCTTGGGTTATTTCGTTTGGCGTGTTCCAAATCGG AAGCCTGATTTACTGA
Upstream 100 bases:
>100_bases AATTAATTTTTTATTTTGGGTTATCAGGATTGACAACCACCGATAAAAAATTGGCCATTCACAGATTGAATAACCGATAG GAGATAGGAAGTACTGCTAT
Downstream 100 bases:
>100_bases TTACACTCATTTTTGCGGTTAGCACGATTAAAATGAAAAAGCGGCGGTTCAAAATAGAACTTGCCGCTTTTTTCATTCAC AACAGAATTTATTTGCTAAT
Product: ferrous iron transport protein B
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 831; Mature: 831
Protein sequence:
>831_residues MNLAELHAGQNGFITKVKGRGAFRKRISEMGFVRGKQITRIKDAPLKDPIEFKLMGFNVSLRKSEAEQIEVVTESEAVSL NGNAHSNGTPVEHFFEKKIKEASKQINVVLVGNPNSGKTSLFNYASGSNERTGNYSGVTISPHESLVSLNGYRINIVDLP GTYSLSAYTPEETFVRRYIIDKQPDVVINIVDASNLERNLYLTTQLIDMDIKVVMALNMYDELTTKGDTLHIEQLGELLG IPIVPTIASKGKGIKQLFDHVIQIHEETEPTYRHIHIQYGDDIEKSLHSLQELIWKNKHITDKASSRLLAVQLLEKDKSI DSFLSQFSEYETIKTKADHEIASLEKQFHEESSSLISEARYGFIAGALKETYQKKEDIQLSRSDKIDNLLTHRIYGYPIF LFFLWIVFQATFSLGQYPVEWLEFLVGEISSFFSSILPAGFFKDLVVSGIIDGTGSVLVFLPNIVILFLFISIMEDTGYM ARVAFIMDKLMHRLGLHGKSFIPLIIGFGCNVPAIMATRTIENPKDRLLTMLIVPFMSCSARLPVYILLISAFFPEHPVT ILFSLYLIGILLSMLFSFVFNKIIFKTGQTPFVMELPPYRVPTLQSVIKHVWFRAYLYLKKVGGVILIASVVVWMLQYFP RQPELDQQLEQDAARVSQTYETKIQAASTDEIKTQLKTALSEKIADMEFATEMTRTERSYLGQFGKTLEPVFRPLGFDWK ISVSLLSGIAAKEIVLSTMGVLFQTANVEEDAHKLEEGLSLHFASLNSAPPFLTALSLLLFILIYFPCLGVVVAVGKESG SWKWAVFVVSYTSLLAWVISFGVFQIGSLIY
Sequences:
>Translated_831_residues MNLAELHAGQNGFITKVKGRGAFRKRISEMGFVRGKQITRIKDAPLKDPIEFKLMGFNVSLRKSEAEQIEVVTESEAVSL NGNAHSNGTPVEHFFEKKIKEASKQINVVLVGNPNSGKTSLFNYASGSNERTGNYSGVTISPHESLVSLNGYRINIVDLP GTYSLSAYTPEETFVRRYIIDKQPDVVINIVDASNLERNLYLTTQLIDMDIKVVMALNMYDELTTKGDTLHIEQLGELLG IPIVPTIASKGKGIKQLFDHVIQIHEETEPTYRHIHIQYGDDIEKSLHSLQELIWKNKHITDKASSRLLAVQLLEKDKSI DSFLSQFSEYETIKTKADHEIASLEKQFHEESSSLISEARYGFIAGALKETYQKKEDIQLSRSDKIDNLLTHRIYGYPIF LFFLWIVFQATFSLGQYPVEWLEFLVGEISSFFSSILPAGFFKDLVVSGIIDGTGSVLVFLPNIVILFLFISIMEDTGYM ARVAFIMDKLMHRLGLHGKSFIPLIIGFGCNVPAIMATRTIENPKDRLLTMLIVPFMSCSARLPVYILLISAFFPEHPVT ILFSLYLIGILLSMLFSFVFNKIIFKTGQTPFVMELPPYRVPTLQSVIKHVWFRAYLYLKKVGGVILIASVVVWMLQYFP RQPELDQQLEQDAARVSQTYETKIQAASTDEIKTQLKTALSEKIADMEFATEMTRTERSYLGQFGKTLEPVFRPLGFDWK ISVSLLSGIAAKEIVLSTMGVLFQTANVEEDAHKLEEGLSLHFASLNSAPPFLTALSLLLFILIYFPCLGVVVAVGKESG SWKWAVFVVSYTSLLAWVISFGVFQIGSLIY >Mature_831_residues MNLAELHAGQNGFITKVKGRGAFRKRISEMGFVRGKQITRIKDAPLKDPIEFKLMGFNVSLRKSEAEQIEVVTESEAVSL NGNAHSNGTPVEHFFEKKIKEASKQINVVLVGNPNSGKTSLFNYASGSNERTGNYSGVTISPHESLVSLNGYRINIVDLP GTYSLSAYTPEETFVRRYIIDKQPDVVINIVDASNLERNLYLTTQLIDMDIKVVMALNMYDELTTKGDTLHIEQLGELLG IPIVPTIASKGKGIKQLFDHVIQIHEETEPTYRHIHIQYGDDIEKSLHSLQELIWKNKHITDKASSRLLAVQLLEKDKSI DSFLSQFSEYETIKTKADHEIASLEKQFHEESSSLISEARYGFIAGALKETYQKKEDIQLSRSDKIDNLLTHRIYGYPIF LFFLWIVFQATFSLGQYPVEWLEFLVGEISSFFSSILPAGFFKDLVVSGIIDGTGSVLVFLPNIVILFLFISIMEDTGYM ARVAFIMDKLMHRLGLHGKSFIPLIIGFGCNVPAIMATRTIENPKDRLLTMLIVPFMSCSARLPVYILLISAFFPEHPVT ILFSLYLIGILLSMLFSFVFNKIIFKTGQTPFVMELPPYRVPTLQSVIKHVWFRAYLYLKKVGGVILIASVVVWMLQYFP RQPELDQQLEQDAARVSQTYETKIQAASTDEIKTQLKTALSEKIADMEFATEMTRTERSYLGQFGKTLEPVFRPLGFDWK ISVSLLSGIAAKEIVLSTMGVLFQTANVEEDAHKLEEGLSLHFASLNSAPPFLTALSLLLFILIYFPCLGVVVAVGKESG SWKWAVFVVSYTSLLAWVISFGVFQIGSLIY
Specific function: Fe(2+) uptake system, probably driven by GTP [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=785, Percent_Identity=31.0828025477707, Blast_Score=356, Evalue=3e-99,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007167 - InterPro: IPR003373 - InterPro: IPR011640 - InterPro: IPR011619 - InterPro: IPR011642 - InterPro: IPR006073 - InterPro: IPR002917 - InterPro: IPR005225 [H]
Pfam domain/function: PF04023 FeoA; PF07664 FeoB_C; PF02421 FeoB_N; PF07670 Gate; PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 93556; Mature: 93556
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLAELHAGQNGFITKVKGRGAFRKRISEMGFVRGKQITRIKDAPLKDPIEFKLMGFNVS CCCHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCEECCCCCCCCCEEEEEECEEE LRKSEAEQIEVVTESEAVSLNGNAHSNGTPVEHFFEKKIKEASKQINVVLVGNPNSGKTS ECCCCCHHEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCEEEEEEECCCCCCCC LFNYASGSNERTGNYSGVTISPHESLVSLNGYRINIVDLPGTYSLSAYTPEETFVRRYII EEECCCCCCCCCCCCCCEEECCCHHHEEECCEEEEEEECCCCEEEECCCCHHHHHHHHHC DKQPDVVINIVDASNLERNLYLTTQLIDMDIKVVMALNMYDELTTKGDTLHIEQLGELLG CCCCCEEEEEECCCCCCCEEEEEEEHHHHCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHC IPIVPTIASKGKGIKQLFDHVIQIHEETEPTYRHIHIQYGDDIEKSLHSLQELIWKNKHI CCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCCC TDKASSRLLAVQLLEKDKSIDSFLSQFSEYETIKTKADHEIASLEKQFHEESSSLISEAR CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH YGFIAGALKETYQKKEDIQLSRSDKIDNLLTHRIYGYPIFLFFLWIVFQATFSLGQYPVE HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH WLEFLVGEISSFFSSILPAGFFKDLVVSGIIDGTGSVLVFLPNIVILFLFISIMEDTGYM HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHH ARVAFIMDKLMHRLGLHGKSFIPLIIGFGCNVPAIMATRTIENPKDRLLTMLIVPFMSCS HHHHHHHHHHHHHHCCCCCCCCHHHEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCC ARLPVYILLISAFFPEHPVTILFSLYLIGILLSMLFSFVFNKIIFKTGQTPFVMELPPYR CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC VPTLQSVIKHVWFRAYLYLKKVGGVILIASVVVWMLQYFPRQPELDQQLEQDAARVSQTY CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH ETKIQAASTDEIKTQLKTALSEKIADMEFATEMTRTERSYLGQFGKTLEPVFRPLGFDWK HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE ISVSLLSGIAAKEIVLSTMGVLFQTANVEEDAHKLEEGLSLHFASLNSAPPFLTALSLLL EHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEEECCCCCCHHHHHHHHHH FILIYFPCLGVVVAVGKESGSWKWAVFVVSYTSLLAWVISFGVFQIGSLIY HHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNLAELHAGQNGFITKVKGRGAFRKRISEMGFVRGKQITRIKDAPLKDPIEFKLMGFNVS CCCHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCEECCCCCCCCCEEEEEECEEE LRKSEAEQIEVVTESEAVSLNGNAHSNGTPVEHFFEKKIKEASKQINVVLVGNPNSGKTS ECCCCCHHEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCEEEEEEECCCCCCCC LFNYASGSNERTGNYSGVTISPHESLVSLNGYRINIVDLPGTYSLSAYTPEETFVRRYII EEECCCCCCCCCCCCCCEEECCCHHHEEECCEEEEEEECCCCEEEECCCCHHHHHHHHHC DKQPDVVINIVDASNLERNLYLTTQLIDMDIKVVMALNMYDELTTKGDTLHIEQLGELLG CCCCCEEEEEECCCCCCCEEEEEEEHHHHCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHC IPIVPTIASKGKGIKQLFDHVIQIHEETEPTYRHIHIQYGDDIEKSLHSLQELIWKNKHI CCCCCHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCCC TDKASSRLLAVQLLEKDKSIDSFLSQFSEYETIKTKADHEIASLEKQFHEESSSLISEAR CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH YGFIAGALKETYQKKEDIQLSRSDKIDNLLTHRIYGYPIFLFFLWIVFQATFSLGQYPVE HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH WLEFLVGEISSFFSSILPAGFFKDLVVSGIIDGTGSVLVFLPNIVILFLFISIMEDTGYM HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHH ARVAFIMDKLMHRLGLHGKSFIPLIIGFGCNVPAIMATRTIENPKDRLLTMLIVPFMSCS HHHHHHHHHHHHHHCCCCCCCCHHHEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCC ARLPVYILLISAFFPEHPVTILFSLYLIGILLSMLFSFVFNKIIFKTGQTPFVMELPPYR CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC VPTLQSVIKHVWFRAYLYLKKVGGVILIASVVVWMLQYFPRQPELDQQLEQDAARVSQTY CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH ETKIQAASTDEIKTQLKTALSEKIADMEFATEMTRTERSYLGQFGKTLEPVFRPLGFDWK HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE ISVSLLSGIAAKEIVLSTMGVLFQTANVEEDAHKLEEGLSLHFASLNSAPPFLTALSLLL EHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEEECCCCCCHHHHHHHHHH FILIYFPCLGVVVAVGKESGSWKWAVFVVSYTSLLAWVISFGVFQIGSLIY HHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12949112 [H]