| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193213891
Identifier: 193213891
GI number: 193213891
Start: 200804
End: 201196
Strand: Direct
Name: 193213891
Synonym: Ctha_0172
Alternate gene names: NA
Gene position: 200804-201196 (Clockwise)
Preceding gene: 193213886
Following gene: 193213892
Centisome position: 6.1
GC content: 46.06
Gene sequence:
>393_bases ATGGAACTTGAAGTTTTTTTTGAGGACAACTTAAAAGTGAATGCCAAACTTGGCGATCAAATCATCCGCACCGATCAGTC AATAGCCGCTGGCGGCGACGGCTCAGCGCCTGCGCCATTCGAGCTTTTTTTGGCGTCTATTGGCACTTGCTCTGGCATTT TTGTCAAACATTTTTGCCTTCAGCGCGGCATCGATCCAACCGGCATTCGCATTTTGCAAAAACACGATTTCAATCCGCAA ACGCACATGATAGAACAAATCAACATCGAAGTGCATTTGCCCGAAGGCTTTCCAGAAAAATATAAAGACGTGATTATCAA GGTTGTTGATCAATGCGCGGTCAAGCGGCATTTGCAACATCCGCCCGTTTTTAATGTGACCACCGTGAGCTAA
Upstream 100 bases:
>100_bases TGCAATGGCTTTTTATAGCTTTTGTTTTTCCATTTAAAAAGGGTTTAATTGGGACAAGTTTTTCCCTTGGCAAGGTTTTT CTAACGCAAAAAGCAAACAC
Downstream 100 bases:
>100_bases CGAACAGCGAAAACCATGAGCAGCGAAAAGAGGCGATTTTCATGATTTTGAGAATTGCCTTTTTTTCATTTCGCTAAAAA AACACTCGACATATTTTTTA
Product: OsmC family protein
Products: NA
Alternate protein names: OsmC-Like Protein; Multidomain Protein; OsmC-Like Domain-Containing Protein
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MELEVFFEDNLKVNAKLGDQIIRTDQSIAAGGDGSAPAPFELFLASIGTCSGIFVKHFCLQRGIDPTGIRILQKHDFNPQ THMIEQINIEVHLPEGFPEKYKDVIIKVVDQCAVKRHLQHPPVFNVTTVS
Sequences:
>Translated_130_residues MELEVFFEDNLKVNAKLGDQIIRTDQSIAAGGDGSAPAPFELFLASIGTCSGIFVKHFCLQRGIDPTGIRILQKHDFNPQ THMIEQINIEVHLPEGFPEKYKDVIIKVVDQCAVKRHLQHPPVFNVTTVS >Mature_130_residues MELEVFFEDNLKVNAKLGDQIIRTDQSIAAGGDGSAPAPFELFLASIGTCSGIFVKHFCLQRGIDPTGIRILQKHDFNPQ THMIEQINIEVHLPEGFPEKYKDVIIKVVDQCAVKRHLQHPPVFNVTTVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14510; Mature: 14510
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELEVFFEDNLKVNAKLGDQIIRTDQSIAAGGDGSAPAPFELFLASIGTCSGIFVKHFCL CEEEEEECCCEEEECCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHH QRGIDPTGIRILQKHDFNPQTHMIEQINIEVHLPEGFPEKYKDVIIKVVDQCAVKRHLQH HCCCCCHHEEEEECCCCCCHHHEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC PPVFNVTTVS CCCEEEEECC >Mature Secondary Structure MELEVFFEDNLKVNAKLGDQIIRTDQSIAAGGDGSAPAPFELFLASIGTCSGIFVKHFCL CEEEEEECCCEEEECCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHH QRGIDPTGIRILQKHDFNPQTHMIEQINIEVHLPEGFPEKYKDVIIKVVDQCAVKRHLQH HCCCCCHHEEEEECCCCCCHHHEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC PPVFNVTTVS CCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA