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The map label for this gene is arlR [H]

Identifier: 193213865

GI number: 193213865

Start: 172592

End: 172963

Strand: Direct

Name: arlR [H]

Synonym: Ctha_0146

Alternate gene names: 193213865

Gene position: 172592-172963 (Clockwise)

Preceding gene: 193213864

Following gene: 193213870

Centisome position: 5.24

GC content: 41.94

Gene sequence:

>372_bases
ATGAATGAAGAAACCAAAATTCTAATTGTGGAAGACGAAGCAATCACGAGCATGCTTTTAGAAGTAGAACTCAGCAATTT
GGGTTATGCTTGCACTTGCGTTTCTACGGGTGAAGAGGCCATTGATCGTGTTAGGATGATGAATTTTTCGTTAGTTTTGA
TGGACATTCGCCTTGCCGGCGGAATGAACGGCATTGAAACCGCCGCTCAAATTCGCCAACAGGCTCAAACATTGCCGATT
ATTTTCGCAACCGGCTATTCTGATAAGAAAATGATTGAAGACGCAAATCATGTTAATCCGGTTTGCTATTTGGTTAAGCC
CTTGAAACTCAAAGAGCTGCTTGCTGTCATTCAATCGCTTTTGAAGCCTTAA

Upstream 100 bases:

>100_bases
GAACAGCAACTGCATGGCTTGGTTGACTTTTCCACCCAAAGTGGGGTTACCTGCCGCTGCATTTTCAGCAATACGCTTTA
CAAATCAAGTTTATAAAATT

Downstream 100 bases:

>100_bases
ACGAGAACCTCGTTCAAACCCCACCTTTTTCTGCTTGAAAAATAGCGGACAAGCAGAACTTCAATAGACATGAAAATTTA
CAGTTTCAACGCGATGGCCG

Product: response regulator receiver protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MNEETKILIVEDEAITSMLLEVELSNLGYACTCVSTGEEAIDRVRMMNFSLVLMDIRLAGGMNGIETAAQIRQQAQTLPI
IFATGYSDKKMIEDANHVNPVCYLVKPLKLKELLAVIQSLLKP

Sequences:

>Translated_123_residues
MNEETKILIVEDEAITSMLLEVELSNLGYACTCVSTGEEAIDRVRMMNFSLVLMDIRLAGGMNGIETAAQIRQQAQTLPI
IFATGYSDKKMIEDANHVNPVCYLVKPLKLKELLAVIQSLLKP
>Mature_123_residues
MNEETKILIVEDEAITSMLLEVELSNLGYACTCVSTGEEAIDRVRMMNFSLVLMDIRLAGGMNGIETAAQIRQQAQTLPI
IFATGYSDKKMIEDANHVNPVCYLVKPLKLKELLAVIQSLLKP

Specific function: Member of the two-component regulatory system ArlS/ArlR involved in the regulation of adhesion, autolysis, multidrug resistance and virulence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1790437, Length=120, Percent_Identity=30.8333333333333, Blast_Score=64, Evalue=2e-12,
Organism=Escherichia coli, GI1790552, Length=120, Percent_Identity=37.5, Blast_Score=61, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 13629; Mature: 13629

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEETKILIVEDEAITSMLLEVELSNLGYACTCVSTGEEAIDRVRMMNFSLVLMDIRLAG
CCCCCEEEEEECHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHEEEEEEHHCC
GMNGIETAAQIRQQAQTLPIIFATGYSDKKMIEDANHVNPVCYLVKPLKLKELLAVIQSL
CCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHH
LKP
HCC
>Mature Secondary Structure
MNEETKILIVEDEAITSMLLEVELSNLGYACTCVSTGEEAIDRVRMMNFSLVLMDIRLAG
CCCCCEEEEEECHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHEEEEEEHHCC
GMNGIETAAQIRQQAQTLPIIFATGYSDKKMIEDANHVNPVCYLVKPLKLKELLAVIQSL
CCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHH
LKP
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA