| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193213820
Identifier: 193213820
GI number: 193213820
Start: 118548
End: 119687
Strand: Direct
Name: 193213820
Synonym: Ctha_0101
Alternate gene names: NA
Gene position: 118548-119687 (Clockwise)
Preceding gene: 193213819
Following gene: 193213821
Centisome position: 3.6
GC content: 45.88
Gene sequence:
>1140_bases ATGAGAAAACGATTTACGCTTTTTTTCCTTTTCGCATTATTTGGCTTTTGGGGTGTGATTTCAGCACAAACCTCAAGCAG TTATTTTCCCGCCGAACAAAACCATGTTTGGTACTACAAGGTTACGCCATTAACTGCCAAAGGGAAAAATGAAAGCAGCG CTTTTTTAAAGGTCGATTCGCTCAAAGAAACCACGACCACAACGTACCAGGGAAAATCTGCAAAACGCTTGCTTAGCGCC TATGGTCTGCTCAACGGCTCGCTCACGACACCATTTCTCGACACCACCTACTTGCATTTTGAAGGCACAAGCGCATGGCA ATATTTGAGCGCGCTGCCCTCAACACTCAACACCTCGCTTCTTTCAGATACCTTGCAAATGAAAAATGTGCTCGCGTTTC TGGATTCGTTAGAAGGCTGGGGGAATCTCTATCGCTTTGGCGAAAGTGTTTCAAAAACCTACACCGTTTTTGAAAAGCAA ATCCAGGTTGATTTTGAAAACTTCCAATTGCCCGTTCAATTTAAAGTGGCAGGCAAACGCCTACCTGACCAGACGCTTTC GCTCGAGGCTGGCGATTTTAACTGCAAGAAATTTGCGATCAGCTTCGGCATCAATTTGATTATTGACTTAGGCATTTTCG GCAAACAGACTGTTCCGGCCATCACAATTATGGATTCAACTTGGATTGCGCCCAACCATTGGATCGTCAAGCAGCTTTTG CCTACTACCAAAGTCGATTTATCCTCGCTGAACACGCTACTCAAAAGCGCCGGCTTGGATACCTTGCCCGTCACCGCATT TACGATTCCGGGCGAACTTACGGAGCTTATCAACCAGCCGATTTCCAGCACGCCCGCGCTTGGCACTGTGCCGGTCAGCG CGTTCAGTTTAGATCAAAATTATCCCAATCCGTTCAACCCACAAACCGCCATTCCATTCGAATTGGAAAAGGCCGGTTTT GTGTCGCTAAAGATCTATGACATTTTAGGCCGCGAAGTTCAACCCCTTGTTGAAAAAAAACTTTCTGCGGGAAAACATCT CGCGTTTTTCAATGGCGAAAAACTGCCAAGCGGGCTGTATTTCTACAAACTGATTGCAGGCGGCAAACAAGAAATTCGCA AAATGATGCTTGTCAAATAA
Upstream 100 bases:
>100_bases CAATCAAAGAATCGATTTTTTCGTATCCAAGTAGGAACGTTTTTACAAAAAAAATAGACATCTATTTGCAACCTGTTTTT TTCAACCCAACCGAACTTCT
Downstream 100 bases:
>100_bases ATTTAGAATTAGAAATTTATAGCGCTATAAAACGTGCAACCAAATTATGAGACCAAACAGTTTTAGAATCATGGACACGA CATGGAAATACAAAGAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MRKRFTLFFLFALFGFWGVISAQTSSSYFPAEQNHVWYYKVTPLTAKGKNESSAFLKVDSLKETTTTTYQGKSAKRLLSA YGLLNGSLTTPFLDTTYLHFEGTSAWQYLSALPSTLNTSLLSDTLQMKNVLAFLDSLEGWGNLYRFGESVSKTYTVFEKQ IQVDFENFQLPVQFKVAGKRLPDQTLSLEAGDFNCKKFAISFGINLIIDLGIFGKQTVPAITIMDSTWIAPNHWIVKQLL PTTKVDLSSLNTLLKSAGLDTLPVTAFTIPGELTELINQPISSTPALGTVPVSAFSLDQNYPNPFNPQTAIPFELEKAGF VSLKIYDILGREVQPLVEKKLSAGKHLAFFNGEKLPSGLYFYKLIAGGKQEIRKMMLVK
Sequences:
>Translated_379_residues MRKRFTLFFLFALFGFWGVISAQTSSSYFPAEQNHVWYYKVTPLTAKGKNESSAFLKVDSLKETTTTTYQGKSAKRLLSA YGLLNGSLTTPFLDTTYLHFEGTSAWQYLSALPSTLNTSLLSDTLQMKNVLAFLDSLEGWGNLYRFGESVSKTYTVFEKQ IQVDFENFQLPVQFKVAGKRLPDQTLSLEAGDFNCKKFAISFGINLIIDLGIFGKQTVPAITIMDSTWIAPNHWIVKQLL PTTKVDLSSLNTLLKSAGLDTLPVTAFTIPGELTELINQPISSTPALGTVPVSAFSLDQNYPNPFNPQTAIPFELEKAGF VSLKIYDILGREVQPLVEKKLSAGKHLAFFNGEKLPSGLYFYKLIAGGKQEIRKMMLVK >Mature_379_residues MRKRFTLFFLFALFGFWGVISAQTSSSYFPAEQNHVWYYKVTPLTAKGKNESSAFLKVDSLKETTTTTYQGKSAKRLLSA YGLLNGSLTTPFLDTTYLHFEGTSAWQYLSALPSTLNTSLLSDTLQMKNVLAFLDSLEGWGNLYRFGESVSKTYTVFEKQ IQVDFENFQLPVQFKVAGKRLPDQTLSLEAGDFNCKKFAISFGINLIIDLGIFGKQTVPAITIMDSTWIAPNHWIVKQLL PTTKVDLSSLNTLLKSAGLDTLPVTAFTIPGELTELINQPISSTPALGTVPVSAFSLDQNYPNPFNPQTAIPFELEKAGF VSLKIYDILGREVQPLVEKKLSAGKHLAFFNGEKLPSGLYFYKLIAGGKQEIRKMMLVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42205; Mature: 42205
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKRFTLFFLFALFGFWGVISAQTSSSYFPAEQNHVWYYKVTPLTAKGKNESSAFLKVDS CCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCEEEEECC LKETTTTTYQGKSAKRLLSAYGLLNGSLTTPFLDTTYLHFEGTSAWQYLSALPSTLNTSL CCCCCCEEECCHHHHHHHHHHHHCCCCCCCCEECEEEEEEECCHHHHHHHHHHHHHHHHH LSDTLQMKNVLAFLDSLEGWGNLYRFGESVSKTYTVFEKQIQVDFENFQLPVQFKVAGKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHEEEEEEEEECCCC LPDQTLSLEAGDFNCKKFAISFGINLIIDLGIFGKQTVPAITIMDSTWIAPNHWIVKQLL CCCCCEEEECCCCCCCEEEEEECCEEEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHC PTTKVDLSSLNTLLKSAGLDTLPVTAFTIPGELTELINQPISSTPALGTVPVSAFSLDQN CCCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHCCCCCCCCCCCCCCCEEEECCCC YPNPFNPQTAIPFELEKAGFVSLKIYDILGREVQPLVEKKLSAGKHLAFFNGEKLPSGLY CCCCCCCCCCCCEEECCCCEEEEEEEEHHCCHHHHHHHHHHCCCCEEEEECCCCCCCCCE FYKLIAGGKQEIRKMMLVK EHHHHCCCHHHHHHHHCCC >Mature Secondary Structure MRKRFTLFFLFALFGFWGVISAQTSSSYFPAEQNHVWYYKVTPLTAKGKNESSAFLKVDS CCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCEEEEECC LKETTTTTYQGKSAKRLLSAYGLLNGSLTTPFLDTTYLHFEGTSAWQYLSALPSTLNTSL CCCCCCEEECCHHHHHHHHHHHHCCCCCCCCEECEEEEEEECCHHHHHHHHHHHHHHHHH LSDTLQMKNVLAFLDSLEGWGNLYRFGESVSKTYTVFEKQIQVDFENFQLPVQFKVAGKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHEEEEEEEEECCCC LPDQTLSLEAGDFNCKKFAISFGINLIIDLGIFGKQTVPAITIMDSTWIAPNHWIVKQLL CCCCCEEEECCCCCCCEEEEEECCEEEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHC PTTKVDLSSLNTLLKSAGLDTLPVTAFTIPGELTELINQPISSTPALGTVPVSAFSLDQN CCCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHCCCCCCCCCCCCCCCEEEECCCC YPNPFNPQTAIPFELEKAGFVSLKIYDILGREVQPLVEKKLSAGKHLAFFNGEKLPSGLY CCCCCCCCCCCCEEECCCCEEEEEEEEHHCCHHHHHHHHHHCCCCEEEEECCCCCCCCCE FYKLIAGGKQEIRKMMLVK EHHHHCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA