| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193213802
Identifier: 193213802
GI number: 193213802
Start: 95932
End: 97467
Strand: Direct
Name: 193213802
Synonym: Ctha_0083
Alternate gene names: NA
Gene position: 95932-97467 (Clockwise)
Preceding gene: 193213799
Following gene: 193213806
Centisome position: 2.91
GC content: 45.9
Gene sequence:
>1536_bases ATGATGACCCTTTCGGAGATCAAGCAAAGTCATCGGCTGACTTATCAGTATTTTTCAGAATGCCAACATGGCGAACGCTG GCTGCAACGCATTGTGGAATTGGATCAATACTGGGAGCAAATTGGCAAACGCAGCACCACGCAAGTTGTTTTTTCAAGCG ATGCTTTACCGAAAAATGTGCGCATCAACGGCCATTTCGATTTGATTTACGCAGGCTCAACCCTTGGCACGATTCATGCC GCAGCTATGGCCGCTATCTACAAGAAAAGCGTTTTGCTTTTTGATAAACACACGCCGGCCAAAACCCATCGGGATTGGAA TATTTCCAAACAAGAGCTTTTGGCGCTGGCGCAGATTGGGTTGCTCACCGAAAAGGAAATTGAATCCGCGATTACTAAAA AATATCAAACCGGATTTGTCGAGTTTGCATCAACTGAACCGCCAACACGGCTTTACCTTGAGCATGTGTTGGATTGTGCC ATCGACTCCGACACCATTTTGCGCCACTGTTTGGAAAAAATGGAAGGCGAAAAAAATCTCGTTTTAGGAAAAACCACGTT TAATCGCTGCTTTCAATGCGACGATGGGATTGTGGTTGAAGTAACCAGCGATGACGGAAGGCTGGAATATTACAAAGCAA AAGTTATGATGGATGCGATGGGCATTTTGTCGCCGATTGCGTTGGAGCTAAACAACGGGAAACCGCAAACGCATATTTGC CCAACGGTTGGAACGGTAGCCAGCGGCCTTTTGGATGTGGATTACGACATCGGAGAAATTTTGGTCAGCACCGAACCTGA AGAATATACAGCAACTGGCGCTCGGCAGCTTATTTGGGAAGGCTTTCCGGCCAGCAACACCGAAATGATAACCTATTTAT TTTTCTACGATCGCATCGACTCTAACAATGACAAATCGCTTCTGAACCTTTTCGAAACTTATTTTCAAAAACTGCCCACC TACAAACGGCCTGGCGCGGATTTCAAATTACACAAGCCGGTTTTTGGAATCATCCCCGCATATCATCACAACGGCATGGG CAAAACACGCGAAACCGCTGCCGATCGGATTTTGCTTTTGGGCGACGCAGCGACACTTTCTTCACCGCTAACATTTTGCG GGTTTGGCTCAATGGTTCGCAACTTGGCACGAACAACCAAACAGCTGAACACCTTGCTCGATGAAGGCCGCTGCACGAAA TCGGATCTTGAACGCGTGAGCGCCTACGAAGAAAATGTCGCGATTATGTCGAATTTGATGAAGTTCATGTGTTTCGAAAA GGATAGCGATCCGCCGAACTTTGTCAACGATTTGATGAATGTTATCATGAAAGTTCTGAAAGATTTACCGCCGCGCTATG GCGTTTCGCTTTTCCGAGATGAAATGGCGCTTTCGGATTTCAATACCCTGATTTTAACCGTCGCGAAAAAATATCCGAAA ATTTTTGAAATCACATTCCGAAAGTTAGGCGTTTCCGGCAGCTTAAGCTGGATTCAGAATTGGTTAGGTTGGCTAACAGC GCCAAAAGAGAAATAA
Upstream 100 bases:
>100_bases TCGCTTAGTTCTATGCGCAGAAAAATTTATTTTATTTCGCAAGAGAGCACAGCGAACCGTCCGCAGCCTCTTGAAGCAAA CGCAATCAACCGATTTATTT
Downstream 100 bases:
>100_bases CCCAAAATTTTGGCGCTTAGTAGAAAAAGCCCCCATTTTTCACAGCATTTTTTAGAAATGACGCTGGAAAATATCAAGCC ACTTCGCCGCGCAAAATACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 511; Mature: 511
Protein sequence:
>511_residues MMTLSEIKQSHRLTYQYFSECQHGERWLQRIVELDQYWEQIGKRSTTQVVFSSDALPKNVRINGHFDLIYAGSTLGTIHA AAMAAIYKKSVLLFDKHTPAKTHRDWNISKQELLALAQIGLLTEKEIESAITKKYQTGFVEFASTEPPTRLYLEHVLDCA IDSDTILRHCLEKMEGEKNLVLGKTTFNRCFQCDDGIVVEVTSDDGRLEYYKAKVMMDAMGILSPIALELNNGKPQTHIC PTVGTVASGLLDVDYDIGEILVSTEPEEYTATGARQLIWEGFPASNTEMITYLFFYDRIDSNNDKSLLNLFETYFQKLPT YKRPGADFKLHKPVFGIIPAYHHNGMGKTRETAADRILLLGDAATLSSPLTFCGFGSMVRNLARTTKQLNTLLDEGRCTK SDLERVSAYEENVAIMSNLMKFMCFEKDSDPPNFVNDLMNVIMKVLKDLPPRYGVSLFRDEMALSDFNTLILTVAKKYPK IFEITFRKLGVSGSLSWIQNWLGWLTAPKEK
Sequences:
>Translated_511_residues MMTLSEIKQSHRLTYQYFSECQHGERWLQRIVELDQYWEQIGKRSTTQVVFSSDALPKNVRINGHFDLIYAGSTLGTIHA AAMAAIYKKSVLLFDKHTPAKTHRDWNISKQELLALAQIGLLTEKEIESAITKKYQTGFVEFASTEPPTRLYLEHVLDCA IDSDTILRHCLEKMEGEKNLVLGKTTFNRCFQCDDGIVVEVTSDDGRLEYYKAKVMMDAMGILSPIALELNNGKPQTHIC PTVGTVASGLLDVDYDIGEILVSTEPEEYTATGARQLIWEGFPASNTEMITYLFFYDRIDSNNDKSLLNLFETYFQKLPT YKRPGADFKLHKPVFGIIPAYHHNGMGKTRETAADRILLLGDAATLSSPLTFCGFGSMVRNLARTTKQLNTLLDEGRCTK SDLERVSAYEENVAIMSNLMKFMCFEKDSDPPNFVNDLMNVIMKVLKDLPPRYGVSLFRDEMALSDFNTLILTVAKKYPK IFEITFRKLGVSGSLSWIQNWLGWLTAPKEK >Mature_511_residues MMTLSEIKQSHRLTYQYFSECQHGERWLQRIVELDQYWEQIGKRSTTQVVFSSDALPKNVRINGHFDLIYAGSTLGTIHA AAMAAIYKKSVLLFDKHTPAKTHRDWNISKQELLALAQIGLLTEKEIESAITKKYQTGFVEFASTEPPTRLYLEHVLDCA IDSDTILRHCLEKMEGEKNLVLGKTTFNRCFQCDDGIVVEVTSDDGRLEYYKAKVMMDAMGILSPIALELNNGKPQTHIC PTVGTVASGLLDVDYDIGEILVSTEPEEYTATGARQLIWEGFPASNTEMITYLFFYDRIDSNNDKSLLNLFETYFQKLPT YKRPGADFKLHKPVFGIIPAYHHNGMGKTRETAADRILLLGDAATLSSPLTFCGFGSMVRNLARTTKQLNTLLDEGRCTK SDLERVSAYEENVAIMSNLMKFMCFEKDSDPPNFVNDLMNVIMKVLKDLPPRYGVSLFRDEMALSDFNTLILTVAKKYPK IFEITFRKLGVSGSLSWIQNWLGWLTAPKEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57945; Mature: 57945
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTLSEIKQSHRLTYQYFSECQHGERWLQRIVELDQYWEQIGKRSTTQVVFSSDALPKNV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCE RINGHFDLIYAGSTLGTIHAAAMAAIYKKSVLLFDKHTPAKTHRDWNISKQELLALAQIG EECCEEEEEEECCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHH LLTEKEIESAITKKYQTGFVEFASTEPPTRLYLEHVLDCAIDSDTILRHCLEKMEGEKNL CCCHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCE VLGKTTFNRCFQCDDGIVVEVTSDDGRLEYYKAKVMMDAMGILSPIALELNNGKPQTHIC EEECHHHHHHEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCEEC PTVGTVASGLLDVDYDIGEILVSTEPEEYTATGARQLIWEGFPASNTEMITYLFFYDRID CCHHHHHHHHEECCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEEHHCC SNNDKSLLNLFETYFQKLPTYKRPGADFKLHKPVFGIIPAYHHNGMGKTRETAADRILLL CCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCHHHHCCCHHCCCCCCHHHHHHCEEEEE GDAATLSSPLTFCGFGSMVRNLARTTKQLNTLLDEGRCTKSDLERVSAYEENVAIMSNLM ECHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH KFMCFEKDSDPPNFVNDLMNVIMKVLKDLPPRYGVSLFRDEMALSDFNTLILTVAKKYPK HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCH IFEITFRKLGVSGSLSWIQNWLGWLTAPKEK HHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure MMTLSEIKQSHRLTYQYFSECQHGERWLQRIVELDQYWEQIGKRSTTQVVFSSDALPKNV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCE RINGHFDLIYAGSTLGTIHAAAMAAIYKKSVLLFDKHTPAKTHRDWNISKQELLALAQIG EECCEEEEEEECCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHH LLTEKEIESAITKKYQTGFVEFASTEPPTRLYLEHVLDCAIDSDTILRHCLEKMEGEKNL CCCHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCE VLGKTTFNRCFQCDDGIVVEVTSDDGRLEYYKAKVMMDAMGILSPIALELNNGKPQTHIC EEECHHHHHHEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCEEC PTVGTVASGLLDVDYDIGEILVSTEPEEYTATGARQLIWEGFPASNTEMITYLFFYDRID CCHHHHHHHHEECCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEEHHCC SNNDKSLLNLFETYFQKLPTYKRPGADFKLHKPVFGIIPAYHHNGMGKTRETAADRILLL CCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCHHHHCCCHHCCCCCCHHHHHHCEEEEE GDAATLSSPLTFCGFGSMVRNLARTTKQLNTLLDEGRCTKSDLERVSAYEENVAIMSNLM ECHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH KFMCFEKDSDPPNFVNDLMNVIMKVLKDLPPRYGVSLFRDEMALSDFNTLILTVAKKYPK HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCH IFEITFRKLGVSGSLSWIQNWLGWLTAPKEK HHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA