| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193213789
Identifier: 193213789
GI number: 193213789
Start: 83073
End: 84065
Strand: Direct
Name: 193213789
Synonym: Ctha_0070
Alternate gene names: NA
Gene position: 83073-84065 (Clockwise)
Preceding gene: 193213788
Following gene: 193213799
Centisome position: 2.52
GC content: 42.09
Gene sequence:
>993_bases ATGCAAAAAAAGCTATATACACTTGCAGAAGTGACGGAGTTTATTCTGCAAGGCGCTAAATTAGTCATTTCTGCCGATGA AAGCTTGTTGGATCAACTCCCTGCTGGCAATTGGATCGGCGGTACAATTCCCTACTTTATGACCGAACAAGGCGGCTCAT TTTCAAAAGATAAACTCTTTGTCGATGACTTAAGCGCTTACGGACTTGAAGTATCATTCAAAGCGTATGACGAAACTGAT ATTCAAACTATCACTAAAAGTAGTTTTGAAAATGGCTTCACCATTTTAATTCTCCCTGCTGGCTCTAAGGTTCACGAATC ATTCAGCCTCAACTCGATGAGCTATAAGGACATTTTCTTTAAGCCCATCACAGGCTATGTTTCTGGTTTCGATTTGAATT TGTTAGGCTCAGCGACGGCAAAAACATACCTTGGAAAGGCGCAAATGAAGTATGAAGATAAAGGCGTAGCCATGCACGTG AAGCTGCCTGACGATCAATTTGCCAAAATTGAAATTTTTAATTTGATGGAAATTGACGAAAGCTCCGACGTAATCACTTT TCCCGAGACAGGCTTCTTACAAAAAAGCTGCATGGTAAATGGCAAAGCAACCAACTTGGCAGAATATTTATCGAACTTGA ATTACGCGGCTGGCCTCCCGCTCATTGCCAATTGCCAAGGCGCTTTGATCAATCGCAGCATAGAAAAGCTCGATATGGAC AACAAAACAGTGCTTTTCTATGCGCCTGTTTTCAGCGATGAAGTGTATCGGTTGGCAAAGCCCGTAACCAACTATCATGA GGAATTCCAGAAAAGAATTGAAATTTACGCAGACGAAAACGTGATCTACTCGGTGCTTTGCGTGGTTTATTATATGGTTG GCGAGCTTGAAAACAAAAAACTGCCGGTTTCTGGCTCGTTCACTTTTGGCGAAGTCGGCTACCAATTGCTGAACCAAACG CTTGTTTATTTAACCCTGAGCAACTCTCACTAA
Upstream 100 bases:
>100_bases CTCGGTTGAACGCGCTGTTCAAAATTTATACAATTTATGCCTAAGGGTTCCCTTAGCGGTTCAAACAGATTTCAAACAAA TTTTTAAAGAGTGGTAAGCC
Downstream 100 bases:
>100_bases GGAAAAACAGCTTCATGCCAGATCAGGCTCGATGTTTTTCTGTTTTTTTTCGCTTTGAAAAACTGAAATGGCGCTGATTG GAATCACTGAAAAATAGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MQKKLYTLAEVTEFILQGAKLVISADESLLDQLPAGNWIGGTIPYFMTEQGGSFSKDKLFVDDLSAYGLEVSFKAYDETD IQTITKSSFENGFTILILPAGSKVHESFSLNSMSYKDIFFKPITGYVSGFDLNLLGSATAKTYLGKAQMKYEDKGVAMHV KLPDDQFAKIEIFNLMEIDESSDVITFPETGFLQKSCMVNGKATNLAEYLSNLNYAAGLPLIANCQGALINRSIEKLDMD NKTVLFYAPVFSDEVYRLAKPVTNYHEEFQKRIEIYADENVIYSVLCVVYYMVGELENKKLPVSGSFTFGEVGYQLLNQT LVYLTLSNSH
Sequences:
>Translated_330_residues MQKKLYTLAEVTEFILQGAKLVISADESLLDQLPAGNWIGGTIPYFMTEQGGSFSKDKLFVDDLSAYGLEVSFKAYDETD IQTITKSSFENGFTILILPAGSKVHESFSLNSMSYKDIFFKPITGYVSGFDLNLLGSATAKTYLGKAQMKYEDKGVAMHV KLPDDQFAKIEIFNLMEIDESSDVITFPETGFLQKSCMVNGKATNLAEYLSNLNYAAGLPLIANCQGALINRSIEKLDMD NKTVLFYAPVFSDEVYRLAKPVTNYHEEFQKRIEIYADENVIYSVLCVVYYMVGELENKKLPVSGSFTFGEVGYQLLNQT LVYLTLSNSH >Mature_330_residues MQKKLYTLAEVTEFILQGAKLVISADESLLDQLPAGNWIGGTIPYFMTEQGGSFSKDKLFVDDLSAYGLEVSFKAYDETD IQTITKSSFENGFTILILPAGSKVHESFSLNSMSYKDIFFKPITGYVSGFDLNLLGSATAKTYLGKAQMKYEDKGVAMHV KLPDDQFAKIEIFNLMEIDESSDVITFPETGFLQKSCMVNGKATNLAEYLSNLNYAAGLPLIANCQGALINRSIEKLDMD NKTVLFYAPVFSDEVYRLAKPVTNYHEEFQKRIEIYADENVIYSVLCVVYYMVGELENKKLPVSGSFTFGEVGYQLLNQT LVYLTLSNSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36885; Mature: 36885
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKKLYTLAEVTEFILQGAKLVISADESLLDQLPAGNWIGGTIPYFMTEQGGSFSKDKLF CCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCEE VDDLSAYGLEVSFKAYDETDIQTITKSSFENGFTILILPAGSKVHESFSLNSMSYKDIFF EECHHHCCEEEEEEECCCCHHHHHHHHHCCCCCEEEEECCCCHHHHCCCCCCCCCCCEEE KPITGYVSGFDLNLLGSATAKTYLGKAQMKYEDKGVAMHVKLPDDQFAKIEIFNLMEIDE ECHHHHHCCCCEEEECCHHHHHHHCCHHEEECCCCEEEEEECCCCCEEEEEEEEEEEECC SSDVITFPETGFLQKSCMVNGKATNLAEYLSNLNYAAGLPLIANCQGALINRSIEKLDMD CCCEEECCCCCCEEHHHEECCCHHHHHHHHHCCCCCCCCCEEECCCCHHHHCHHHHHCCC NKTVLFYAPVFSDEVYRLAKPVTNYHEEFQKRIEIYADENVIYSVLCVVYYMVGELENKK CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHCCCCCC LPVSGSFTFGEVGYQLLNQTLVYLTLSNSH CCCCCCCCHHHHHHHHHCCEEEEEEEECCC >Mature Secondary Structure MQKKLYTLAEVTEFILQGAKLVISADESLLDQLPAGNWIGGTIPYFMTEQGGSFSKDKLF CCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCEE VDDLSAYGLEVSFKAYDETDIQTITKSSFENGFTILILPAGSKVHESFSLNSMSYKDIFF EECHHHCCEEEEEEECCCCHHHHHHHHHCCCCCEEEEECCCCHHHHCCCCCCCCCCCEEE KPITGYVSGFDLNLLGSATAKTYLGKAQMKYEDKGVAMHVKLPDDQFAKIEIFNLMEIDE ECHHHHHCCCCEEEECCHHHHHHHCCHHEEECCCCEEEEEECCCCCEEEEEEEEEEEECC SSDVITFPETGFLQKSCMVNGKATNLAEYLSNLNYAAGLPLIANCQGALINRSIEKLDMD CCCEEECCCCCCEEHHHEECCCHHHHHHHHHCCCCCCCCCEEECCCCHHHHCHHHHHCCC NKTVLFYAPVFSDEVYRLAKPVTNYHEEFQKRIEIYADENVIYSVLCVVYYMVGELENKK CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHCCCCCC LPVSGSFTFGEVGYQLLNQTLVYLTLSNSH CCCCCCCCHHHHHHHHHCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA