Definition Chloroherpeton thalassium ATCC 35110 chromosome, complete genome.
Accession NC_011026
Length 3,293,456

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The map label for this gene is 193213788

Identifier: 193213788

GI number: 193213788

Start: 81609

End: 83069

Strand: Direct

Name: 193213788

Synonym: Ctha_0069

Alternate gene names: NA

Gene position: 81609-83069 (Clockwise)

Preceding gene: 193213787

Following gene: 193213789

Centisome position: 2.48

GC content: 45.24

Gene sequence:

>1461_bases
ATGACACCGTTTAATAGCCATCCCCCCAATAGACTCACCAAAACGCTTGATGCAATTAGCAATGCGGTTGATTGGGACAA
AGTGCTAAAATTTTTAGACGAGCATTCTGTTGAAGACTCAATCGTGAAACTTCCACCTGAAAAGCTGCTGCGAAACATGA
AGTTCGTGTTCCTACAGCATATTTACGATCTTGCCGACTATGACTTAATCGAACTCATCAACGATCGGATCTCTTTTAAG
ATCTTTTTTGGACTTGAGCCTGATGATGATTTTGAAGATGATGAGGCTTCAGCTGCGTTTCGAGAGCTGCTTCTTGAAAA
AAGGCTGTACACGCCTCTGATTAATTTTATATGGGCATCTCTTGAAATCAGCGGCTTTTCGATTGAAAAAGGTGTTATTA
TGGATGCGCGAATACGCGACACCGAGACACCTGCGCCAAAACCACCCGACACGCCCCACGAACCAGCAAAGCACCCATCA
CCTGAATTGCATATTAGTTATGACACCGTTCAAAAGATGATTCGCGGTGAAATTGCGCAGCCATTTGAAACCTATGCGCT
ACAAATGCAGTTGCATCAAGCTCAAAAAGATGTTCGCAGCGGCGCGCTTTCTTTGGACGAAGCCACGGAAAATCTGTATA
AACTCTGCGCTTTGGTGCTAACGAAAAAAAAGCCGGCGGAAAAAAGCCCTACGCCGCCAGCCAGCCCGGCACCAAAAACA
ACCACACCTCATGCTTTACCACAGAAAGTCAACCATGACCTTTTGAGAAAGCTGATTCTGGGCGAAGTTCACTATCACTT
CAAGCATTATGCGCTTCAGATGCAACTGCATCAATCCCAAAAAGAAGTCCGCAACGGCGTGATTTCCTTAGACGAAGCAA
CAGACAACCTTTATGAGCTTTGCAAGCGCTTGCTGACGAAACAGTTGCCGGCTCATAAACCGCAAGTCGAACACGCCTTG
CCACCAGCAAAAGAGCCGCCAGCCACATTCAAAATCAACCGCGAGATCCTTGAAAAAATGATTCGCGGCGAGCTCAACCA
AAACTTCAAGCATTATGCACTTCAAATGCAATTGCATCAAGCGAAAAAAGAAGTTGGCTCGGGCAGTTGCTCAATCGACG
AAGCCGTTGAAAAGCTCTACGATCTTTGCAAGCATGTACTTGTGCACAAGCCATACGACGAGCTCACGCACGAAACCCAC
GACACGCACGAAACGCATCCGCTTCCGCAACATAGAAAATTACCCGACATCAACCGGGTTGAATGGAAAAAGTTAGTTAC
GGGGGAATTGGAACATCAATTTAGAAATTATGTTTTGCAGGTGCAGCTACACCAAACTAAAAAAGAAGTTCGCAGCGGAA
AGCTCTCGGTTGAACGCGCTGTTCAAAATTTATACAATTTATGCCTAAGGGTTCCCTTAGCGGTTCAAACAGATTTCAAA
CAAATTTTTAAAGAGTGGTAA

Upstream 100 bases:

>100_bases
CCCGTTTTCACTCACATGTTTTAATAAAAAAGGTATTTTGCGGTTTTCAGATGCGGATACCATTTGTTGCTGGATGCTTT
AACTTTTTTATGTAGAAGAT

Downstream 100 bases:

>100_bases
GCCATGCAAAAAAAGCTATATACACTTGCAGAAGTGACGGAGTTTATTCTGCAAGGCGCTAAATTAGTCATTTCTGCCGA
TGAAAGCTTGTTGGATCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 486; Mature: 485

Protein sequence:

>486_residues
MTPFNSHPPNRLTKTLDAISNAVDWDKVLKFLDEHSVEDSIVKLPPEKLLRNMKFVFLQHIYDLADYDLIELINDRISFK
IFFGLEPDDDFEDDEASAAFRELLLEKRLYTPLINFIWASLEISGFSIEKGVIMDARIRDTETPAPKPPDTPHEPAKHPS
PELHISYDTVQKMIRGEIAQPFETYALQMQLHQAQKDVRSGALSLDEATENLYKLCALVLTKKKPAEKSPTPPASPAPKT
TTPHALPQKVNHDLLRKLILGEVHYHFKHYALQMQLHQSQKEVRNGVISLDEATDNLYELCKRLLTKQLPAHKPQVEHAL
PPAKEPPATFKINREILEKMIRGELNQNFKHYALQMQLHQAKKEVGSGSCSIDEAVEKLYDLCKHVLVHKPYDELTHETH
DTHETHPLPQHRKLPDINRVEWKKLVTGELEHQFRNYVLQVQLHQTKKEVRSGKLSVERAVQNLYNLCLRVPLAVQTDFK
QIFKEW

Sequences:

>Translated_486_residues
MTPFNSHPPNRLTKTLDAISNAVDWDKVLKFLDEHSVEDSIVKLPPEKLLRNMKFVFLQHIYDLADYDLIELINDRISFK
IFFGLEPDDDFEDDEASAAFRELLLEKRLYTPLINFIWASLEISGFSIEKGVIMDARIRDTETPAPKPPDTPHEPAKHPS
PELHISYDTVQKMIRGEIAQPFETYALQMQLHQAQKDVRSGALSLDEATENLYKLCALVLTKKKPAEKSPTPPASPAPKT
TTPHALPQKVNHDLLRKLILGEVHYHFKHYALQMQLHQSQKEVRNGVISLDEATDNLYELCKRLLTKQLPAHKPQVEHAL
PPAKEPPATFKINREILEKMIRGELNQNFKHYALQMQLHQAKKEVGSGSCSIDEAVEKLYDLCKHVLVHKPYDELTHETH
DTHETHPLPQHRKLPDINRVEWKKLVTGELEHQFRNYVLQVQLHQTKKEVRSGKLSVERAVQNLYNLCLRVPLAVQTDFK
QIFKEW
>Mature_485_residues
TPFNSHPPNRLTKTLDAISNAVDWDKVLKFLDEHSVEDSIVKLPPEKLLRNMKFVFLQHIYDLADYDLIELINDRISFKI
FFGLEPDDDFEDDEASAAFRELLLEKRLYTPLINFIWASLEISGFSIEKGVIMDARIRDTETPAPKPPDTPHEPAKHPSP
ELHISYDTVQKMIRGEIAQPFETYALQMQLHQAQKDVRSGALSLDEATENLYKLCALVLTKKKPAEKSPTPPASPAPKTT
TPHALPQKVNHDLLRKLILGEVHYHFKHYALQMQLHQSQKEVRNGVISLDEATDNLYELCKRLLTKQLPAHKPQVEHALP
PAKEPPATFKINREILEKMIRGELNQNFKHYALQMQLHQAKKEVGSGSCSIDEAVEKLYDLCKHVLVHKPYDELTHETHD
THETHPLPQHRKLPDINRVEWKKLVTGELEHQFRNYVLQVQLHQTKKEVRSGKLSVERAVQNLYNLCLRVPLAVQTDFKQ
IFKEW

Specific function: Unknown

COG id: COG3039

COG function: function code L; Transposase and inactivated derivatives, IS5 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56149; Mature: 56018

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPFNSHPPNRLTKTLDAISNAVDWDKVLKFLDEHSVEDSIVKLPPEKLLRNMKFVFLQH
CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHH
IYDLADYDLIELINDRISFKIFFGLEPDDDFEDDEASAAFRELLLEKRLYTPLINFIWAS
HHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LEISGFSIEKGVIMDARIRDTETPAPKPPDTPHEPAKHPSPELHISYDTVQKMIRGEIAQ
HEECCEEECCCCEEECEECCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCC
PFETYALQMQLHQAQKDVRSGALSLDEATENLYKLCALVLTKKKPAEKSPTPPASPAPKT
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
TTPHALPQKVNHDLLRKLILGEVHYHFKHYALQMQLHQSQKEVRNGVISLDEATDNLYEL
CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHH
CKRLLTKQLPAHKPQVEHALPPAKEPPATFKINREILEKMIRGELNQNFKHYALQMQLHQ
HHHHHHHHCCCCCCCHHHCCCCCCCCCCCEEECHHHHHHHHHHHHCCCHHHHHHHHHHHH
AKKEVGSGSCSIDEAVEKLYDLCKHVLVHKPYDELTHETHDTHETHPLPQHRKLPDINRV
HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHH
EWKKLVTGELEHQFRNYVLQVQLHQTKKEVRSGKLSVERAVQNLYNLCLRVPLAVQTDFK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHH
QIFKEW
HHHHCC
>Mature Secondary Structure 
TPFNSHPPNRLTKTLDAISNAVDWDKVLKFLDEHSVEDSIVKLPPEKLLRNMKFVFLQH
CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHH
IYDLADYDLIELINDRISFKIFFGLEPDDDFEDDEASAAFRELLLEKRLYTPLINFIWAS
HHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LEISGFSIEKGVIMDARIRDTETPAPKPPDTPHEPAKHPSPELHISYDTVQKMIRGEIAQ
HEECCEEECCCCEEECEECCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCC
PFETYALQMQLHQAQKDVRSGALSLDEATENLYKLCALVLTKKKPAEKSPTPPASPAPKT
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
TTPHALPQKVNHDLLRKLILGEVHYHFKHYALQMQLHQSQKEVRNGVISLDEATDNLYEL
CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHH
CKRLLTKQLPAHKPQVEHALPPAKEPPATFKINREILEKMIRGELNQNFKHYALQMQLHQ
HHHHHHHHCCCCCCCHHHCCCCCCCCCCCEEECHHHHHHHHHHHHCCCHHHHHHHHHHHH
AKKEVGSGSCSIDEAVEKLYDLCKHVLVHKPYDELTHETHDTHETHPLPQHRKLPDINRV
HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHH
EWKKLVTGELEHQFRNYVLQVQLHQTKKEVRSGKLSVERAVQNLYNLCLRVPLAVQTDFK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHH
QIFKEW
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA