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The map label for this gene is yggU [C]

Identifier: 193213756

GI number: 193213756

Start: 47492

End: 47785

Strand: Direct

Name: yggU [C]

Synonym: Ctha_0036

Alternate gene names: 193213756

Gene position: 47492-47785 (Clockwise)

Preceding gene: 193213755

Following gene: 193213757

Centisome position: 1.44

GC content: 45.24

Gene sequence:

>294_bases
ATGATCTCGTGCTCCGAAAAAAATGGCGCGGTGGATTTCAGTGTGCGCTTGCAACCGCGAGCTTCAAAGAATGAAATCGT
TGGGGAATACGACGGCGCATTGAAAATTCGAATTGCCGCGCCACCTGTGGAAAACGCCGCAAACAAAGCCTGCATTGAGT
TTTTAGCCAAAACATTTGGCATTGCGAAAAGTCAAGTTGAAATTCTTTCGGGCGATACTTCGCGCAACAAGCTCATTCGG
ATTTATGGAATCGATAAAACGACGCTGTTAGCCAAGTTTTATAGTAAATCCTGA

Upstream 100 bases:

>100_bases
CGAAAACAGCAAGGCGATCAAAAATGCGCCTGATAGCGTCGAGCGGTTCTTCAAAGTGCCGAAAGTAATCGGCTGAGCCG
AAACGCTTACGGACAATCAT

Downstream 100 bases:

>100_bases
AAATAGTGATAGGAAATTATGCAAAAATATGCCCGTGTCACCCTGAGCGGAGACGAAGGGGGCAACAAATACAGGCTTCG
CCTCCGCTTAGCCCGACACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MISCSEKNGAVDFSVRLQPRASKNEIVGEYDGALKIRIAAPPVENAANKACIEFLAKTFGIAKSQVEILSGDTSRNKLIR
IYGIDKTTLLAKFYSKS

Sequences:

>Translated_97_residues
MISCSEKNGAVDFSVRLQPRASKNEIVGEYDGALKIRIAAPPVENAANKACIEFLAKTFGIAKSQVEILSGDTSRNKLIR
IYGIDKTTLLAKFYSKS
>Mature_97_residues
MISCSEKNGAVDFSVRLQPRASKNEIVGEYDGALKIRIAAPPVENAANKACIEFLAKTFGIAKSQVEILSGDTSRNKLIR
IYGIDKTTLLAKFYSKS

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0235 family [H]

Homologues:

Organism=Escherichia coli, GI87082189, Length=65, Percent_Identity=46.1538461538462, Blast_Score=64, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005228
- InterPro:   IPR003746 [H]

Pfam domain/function: PF02594 DUF167 [H]

EC number: NA

Molecular weight: Translated: 10581; Mature: 10581

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISCSEKNGAVDFSVRLQPRASKNEIVGEYDGALKIRIAAPPVENAANKACIEFLAKTFG
CCCCCCCCCCEEEEEEECCCCCCCCEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHC
IAKSQVEILSGDTSRNKLIRIYGIDKTTLLAKFYSKS
CCCCEEEEECCCCCCCEEEEEEECCHHHHHHHHHCCC
>Mature Secondary Structure
MISCSEKNGAVDFSVRLQPRASKNEIVGEYDGALKIRIAAPPVENAANKACIEFLAKTFG
CCCCCCCCCCEEEEEEECCCCCCCCEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHC
IAKSQVEILSGDTSRNKLIRIYGIDKTTLLAKFYSKS
CCCCEEEEECCCCCCCEEEEEEECCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA